RNA–Protein interactions for RNA: ENST00000335643.12

KATNA1-201, Transcript of katanin catalytic subunit A1, humanhuman

TSL 1 (best) BASIC

Gene KATNA1, Length 1,564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNA1-201ENST00000335643 DEDD2Q8WXF8 326 aa11.16□□□□□ -0.62
KATNA1-201ENST00000335643 SLC25A21Q9BQT8 299 aaPredicted RBP11.16□□□□□ -0.62
KATNA1-201ENST00000335643 RBMY1BA6NDE4 496 aaKnown RBP11.16□□□□□ -0.62
KATNA1-201ENST00000335643 RBMY1EA6NEQ0 496 aaKnown RBP11.16□□□□□ -0.62
KATNA1-201ENST00000335643 CEBPZOSA8MTT3 80 aa11.16□□□□□ -0.62
KATNA1-201ENST00000335643 OR11H12B2RN74 326 aa11.16□□□□□ -0.62
KATNA1-201ENST00000335643 K7EMT4 169 aa11.16□□□□□ -0.62
KATNA1-201ENST00000335643 YIF1AO95070 293 aa11.16□□□□□ -0.62
KATNA1-201ENST00000335643 TMEM50AO95807 157 aa11.16□□□□□ -0.62
KATNA1-201ENST00000335643 RBMY1DP0C7P1 496 aaKnown RBP11.16□□□□□ -0.62
KATNA1-201ENST00000335643 OPRK1P41145 380 aa11.16□□□□□ -0.62
KATNA1-201ENST00000335643 SUB1P53999 127 aaKnown RBP eCLIP11.16□□□□□ -0.621e-7■■■■■ 35.4
KATNA1-201ENST00000335643 ZFAND3Q9H8U3 227 aa11.16□□□□□ -0.62
KATNA1-201ENST00000335643 HEYLQ9NQ87 328 aaPredicted RBP11.16□□□□□ -0.62
KATNA1-201ENST00000335643 GAR1Q9NY12 217 aaKnown RBP11.16□□□□□ -0.62
KATNA1-201ENST00000335643 FLVCR2Q9UPI3 526 aa11.16□□□□□ -0.62
KATNA1-201ENST00000335643 IGHV3OR16-13A0A075B7E8 117 aa11.15□□□□□ -0.62
KATNA1-201ENST00000335643 IGHV3-74A0A0B4J1X5 117 aa11.15□□□□□ -0.62
KATNA1-201ENST00000335643 A0A1B0GU03 582 aa11.15□□□□□ -0.62
KATNA1-201ENST00000335643 APOHP02749 345 aaPredicted RBP11.15□□□□□ -0.62
KATNA1-201ENST00000335643 ANXA3P12429 323 aa11.15□□□□□ -0.62
KATNA1-201ENST00000335643 VAMP1P23763 118 aa11.15□□□□□ -0.62
KATNA1-201ENST00000335643 HTR2BP41595 481 aa11.15□□□□□ -0.62
KATNA1-201ENST00000335643 RELQ04864 619 aaPredicted RBP11.15□□□□□ -0.62
KATNA1-201ENST00000335643 TNFRSF9Q07011 255 aa11.15□□□□□ -0.62
KATNA1-201ENST00000335643 SMCO1Q147U7 214 aa11.15□□□□□ -0.62
KATNA1-201ENST00000335643 C2orf83Q53S99 150 aa11.15□□□□□ -0.62
KATNA1-201ENST00000335643 TRIQKQ629K1 86 aa11.15□□□□□ -0.62
KATNA1-201ENST00000335643 TOMM20LQ6UXN7 152 aa11.15□□□□□ -0.62
KATNA1-201ENST00000335643 DUSP18Q8NEJ0 188 aa11.15□□□□□ -0.62
KATNA1-201ENST00000335643 SLC24A4Q8NFF2 622 aa11.15□□□□□ -0.62
KATNA1-201ENST00000335643 CITED4Q96RK1 184 aa11.15□□□□□ -0.62
KATNA1-201ENST00000335643 RNF2Q99496 336 aa11.15□□□□□ -0.62
KATNA1-201ENST00000335643 RBKSQ9H477 322 aa11.15□□□□□ -0.62
KATNA1-201ENST00000335643 TUBA4BQ9H853 241 aa11.15□□□□□ -0.62
KATNA1-201ENST00000335643 NDUFA13Q9P0J0 144 aa11.15□□□□□ -0.62
KATNA1-201ENST00000335643 HSPB7Q9UBY9 170 aa11.15□□□□□ -0.62
KATNA1-201ENST00000335643 SMPXQ9UHP9 88 aa11.15□□□□□ -0.62
KATNA1-201ENST00000335643 IGHV7-4-1A0A0J9YVY3 117 aa11.14□□□□□ -0.63
KATNA1-201ENST00000335643 CORTO00230 105 aa11.14□□□□□ -0.63
KATNA1-201ENST00000335643 SFT2D2O95562 160 aa11.14□□□□□ -0.63
KATNA1-201ENST00000335643 IL7P13232 177 aa11.14□□□□□ -0.63
KATNA1-201ENST00000335643 NPBWR1P48145 328 aa11.14□□□□□ -0.63
KATNA1-201ENST00000335643 RBMS2Q15434 407 aaKnown RBP11.14□□□□□ -0.63
KATNA1-201ENST00000335643 RBPMS2Q6ZRY4 209 aaKnown RBP11.14□□□□□ -0.63
KATNA1-201ENST00000335643 CENPSQ8N2Z9 138 aa11.14□□□□□ -0.63
KATNA1-201ENST00000335643 LRTM2Q8N967 370 aa11.14□□□□□ -0.63
KATNA1-201ENST00000335643 OR52B4Q8NGK2 314 aa11.14□□□□□ -0.63
KATNA1-201ENST00000335643 SRD5A3Q9H8P0 318 aa11.14□□□□□ -0.63
KATNA1-201ENST00000335643 RETNQ9HD89 108 aa11.14□□□□□ -0.63
KATNA1-201ENST00000335643 PUS1Q9Y606 427 aaKnown RBP eCLIP11.14□□□□□ -0.63
KATNA1-201ENST00000335643 TRAV25A0A0B4J276 109 aa11.13□□□□□ -0.63
KATNA1-201ENST00000335643 CHEK1O14757 476 aa11.13□□□□□ -0.63
KATNA1-201ENST00000335643 TSPAN4O14817 238 aa11.13□□□□□ -0.63
KATNA1-201ENST00000335643 PITX3O75364 302 aa11.13□□□□□ -0.63
KATNA1-201ENST00000335643 CLN5O75503 358 aa11.13□□□□□ -0.63
KATNA1-201ENST00000335643 NDUFB6O95139 128 aa11.13□□□□□ -0.63
KATNA1-201ENST00000335643 SRPXP78539 464 aa11.13□□□□□ -0.63
KATNA1-201ENST00000335643 PRSS54Q6PEW0 395 aa11.13□□□□□ -0.63
KATNA1-201ENST00000335643 LILRB2Q8N423 598 aa11.13□□□□□ -0.63
KATNA1-201ENST00000335643 OR4X1Q8NH49 305 aa11.13□□□□□ -0.63
KATNA1-201ENST00000335643 DTD1Q8TEA8 209 aa11.13□□□□□ -0.63
KATNA1-201ENST00000335643 RHPN1-AS1Q9BWJ2 59 aa11.13□□□□□ -0.63
KATNA1-201ENST00000335643 IGKV1-17P01599 117 aa11.12□□□□□ -0.63
KATNA1-201ENST00000335643 INPP1P49441 399 aa11.12□□□□□ -0.63
KATNA1-201ENST00000335643 ZNF600Q6ZNG1 722 aa11.12□□□□□ -0.63
KATNA1-201ENST00000335643 SLC16A13Q7RTY0 426 aa11.12□□□□□ -0.63
KATNA1-201ENST00000335643 TMEM116Q8NCL8 245 aa11.12□□□□□ -0.63
KATNA1-201ENST00000335643 SPAG8Q99932 426 aaPredicted RBP11.12□□□□□ -0.63
KATNA1-201ENST00000335643 ZMAT4Q9H898 229 aa11.12□□□□□ -0.63
KATNA1-201ENST00000335643 UBQLN2Q9UHD9 624 aa11.12□□□□□ -0.63
KATNA1-201ENST00000335643 TRAV14DV4A0A0A6YYC5 116 aa11.11□□□□□ -0.63
KATNA1-201ENST00000335643 IGHV3-66A0A0C4DH42 116 aa11.11□□□□□ -0.63
KATNA1-201ENST00000335643 PLA2G10O15496 165 aa11.11□□□□□ -0.63
KATNA1-201ENST00000335643 NPY1RP25929 384 aa11.11□□□□□ -0.63
KATNA1-201ENST00000335643 ODF3L2Q3SX64 289 aa11.11□□□□□ -0.63
KATNA1-201ENST00000335643 TIGITQ495A1 244 aa11.11□□□□□ -0.63
KATNA1-201ENST00000335643 OR1S1Q8NH92 325 aa11.11□□□□□ -0.63
KATNA1-201ENST00000335643 ST8SIA2Q92186 375 aa11.11□□□□□ -0.63
KATNA1-201ENST00000335643 DUXBA0A1W2PPF3 345 aa11.11□□□□□ -0.63
KATNA1-201ENST00000335643 C9orf170A2RU37 121 aa11.11□□□□□ -0.63
KATNA1-201ENST00000335643 NAP1L6A6NFF2 107 aa11.11□□□□□ -0.63
KATNA1-201ENST00000335643 HOXB5P09067 269 aa11.11□□□□□ -0.63
KATNA1-201ENST00000335643 RND2P52198 227 aa11.11□□□□□ -0.63
KATNA1-201ENST00000335643 FAM90A2PQ658T7 463 aa11.11□□□□□ -0.63
KATNA1-201ENST00000335643 RNASEH2CQ8TDP1 164 aaKnown RBP11.11□□□□□ -0.63
KATNA1-201ENST00000335643 HIPK2Q9H2X6 1198 aa11.11□□□□□ -0.63
KATNA1-201ENST00000335643 SACSQ9NZJ4 4579 aa11.1□□□□□ -0.63
KATNA1-201ENST00000335643 IGKV3-7A0A075B6H7 116 aa11.1□□□□□ -0.63
KATNA1-201ENST00000335643 MPTX1A8MV57 137 aa11.1□□□□□ -0.63
KATNA1-201ENST00000335643 ADAP1O75689 374 aa11.1□□□□□ -0.63
KATNA1-201ENST00000335643 IFNA10P01566 189 aa11.1□□□□□ -0.63
KATNA1-201ENST00000335643 IGLC1P0CG04 106 aa11.1□□□□□ -0.63
KATNA1-201ENST00000335643 ANXA7P20073 488 aaKnown RBP11.1□□□□□ -0.63
KATNA1-201ENST00000335643 FAM110AQ9BQ89 295 aa11.1□□□□□ -0.63
KATNA1-201ENST00000335643 SPATA25Q9BR10 227 aa11.1□□□□□ -0.63
KATNA1-201ENST00000335643 LYSTQ99698 3801 aa11.1□□□□□ -0.63
KATNA1-201ENST00000335643 OR4E1P0C645 316 aa11.09□□□□□ -0.63
KATNA1-201ENST00000335643 IAPPP10997 89 aa11.09□□□□□ -0.63
KATNA1-201ENST00000335643 DHRS2Q13268 280 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms