RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 AKR7A3O95154 331 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 TTRP02766 147 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 PRG2P13727 222 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 CTLA4P16410 223 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 PRKACAP17612 351 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 PTNP21246 168 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 GPX4P36969 197 aaPredicted RBP0.97□□□□□ -2.25
LINC00643-201ENST00000334389 GUCA1AP43080 201 aaPredicted RBP0.97□□□□□ -2.25
LINC00643-201ENST00000334389 RND2P52198 227 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 RPL31P62899 125 aaKnown RBP0.97□□□□□ -2.25
LINC00643-201ENST00000334389 ZNF85Q03923 595 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 SRYQ05066 204 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 EXOSC2Q13868 293 aaKnown RBP0.97□□□□□ -2.25
LINC00643-201ENST00000334389 MAD2L1BPQ15013 274 aaPredicted RBP0.97□□□□□ -2.25
LINC00643-201ENST00000334389 VAMP3Q15836 100 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 SGCAQ16586 387 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 DEFB121Q5J5C9 76 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 GLYATL3Q5SZD4 288 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 ZFAND6Q6FIF0 208 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 TMPRSS11AQ6ZMR5 421 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 COX8CQ7Z4L0 72 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 TMED4Q7Z7H5 227 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 LRRTM1Q86UE6 522 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 SERPINA12Q8IW75 414 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 SLC35F2Q8IXU6 374 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 HS3ST5Q8IZT8 346 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 OR5AS1Q8N127 324 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 C10orf111Q8N326 155 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 GBGT1Q8N5D6 347 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 OR2Z1Q8NG97 314 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 OR5D16Q8NGK9 328 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 OR2AJ1Q8NGZ0 328 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 OR10J5Q8NHC4 309 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 TMEM255BQ8WV15 326 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 TOMM40LQ969M1 308 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 LYZL4Q96KX0 146 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 PGLYRP3Q96LB9 341 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 TSSK2Q96PF2 358 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 ABHD6Q9BV23 337 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 MND1Q9BWT6 205 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 SRRQ9GZT4 340 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 PARLQ9H300 379 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 PPDPFQ9H3Y8 114 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 ZNF286AQ9HBT8 521 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 IFT46Q9NQC8 304 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 GSN-AS1Q9NRJ2 163 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 UQCC1Q9NVA1 299 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 MSRB1Q9NZV6 116 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 WASHC3Q9Y3C0 194 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 ARL2-SNX15V9GYD0 113 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 LAMA5O15230 3695 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 SAA2-SAA4A0A096LPE2 208 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 TRBV4-1A0A0J9YWV2 114 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 TRBV6-1A0A0K0K1D8 114 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 LOC100131303A0A0U1RQF7 123 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 FAM240BA0A1B0GVZ2 78 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 NCF1CA8MVU1 366 aaPredicted RBP0.97□□□□□ -2.25
LINC00643-201ENST00000334389 H7C423 109 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 RNF13O43567 381 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 NXPH2O95156 264 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 TMEM50AO95807 157 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 GPANK1O95872 356 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 HPRT1P00492 218 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 OCM2P0CE71 109 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 OCMP0CE72 109 aaPredicted RBP0.97□□□□□ -2.25
LINC00643-201ENST00000334389 NDUFB7P17568 137 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 CBLN1P23435 193 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 BTCP35070 178 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 DAPP51397 102 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 PLP1P60201 277 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 ACTBP60709 375 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 RPS11P62280 158 aaKnown RBP eCLIP0.97□□□□□ -2.25
LINC00643-201ENST00000334389 SELENOTP62341 195 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 PDZK1IP1Q13113 114 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 FLOT2Q14254 428 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 GRK1Q15835 563 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 Q499Y3 187 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 SPRNQ5BIV9 151 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 RNASE10Q5GAN6 216 aaKnown RBP0.97□□□□□ -2.25
LINC00643-201ENST00000334389 AVPI1Q5T686 147 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 LPCAT3Q6P1A2 487 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 ZNF322Q6U7Q0 402 aaPredicted RBP0.97□□□□□ -2.25
LINC00643-201ENST00000334389 TEX261Q6UWH6 196 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 DHRS11Q6UWP2 260 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 ZFP2Q6ZN57 461 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 H1FOOQ8IZA3 346 aaPredicted RBP0.97□□□□□ -2.25
LINC00643-201ENST00000334389 C1orf158Q8N1D5 194 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 STX19Q8N4C7 294 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 LRRC29Q8WV35 223 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 APH1BQ8WW43 257 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 GLMPQ8WWB7 406 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 ZNRF4Q8WWF5 429 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 DAZAP1Q96EP5 407 aaKnown RBP0.97□□□□□ -2.25
LINC00643-201ENST00000334389 HYLS1Q96M11 299 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 IGF2BP2-AS1Q96M15 143 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 TMEM138Q9NPI0 162 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 GPR84Q9NQS5 396 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 DAZ1Q9NQZ3 744 aaKnown RBP0.97□□□□□ -2.25
LINC00643-201ENST00000334389 FAM118AQ9NWS6 357 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 RDH8Q9NYR8 311 aa0.97□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms