RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 A0A1W2PN81 502 aa12.92□□□□□ -0.34
SHOX-201ENST00000334060 M0QZK8 103 aa12.92□□□□□ -0.34
SHOX-201ENST00000334060 IFNA10P01566 189 aa12.92□□□□□ -0.34
SHOX-201ENST00000334060 CD5P06127 495 aa12.92□□□□□ -0.34
SHOX-201ENST00000334060 SLC25A6P12236 298 aa12.92□□□□□ -0.34
SHOX-201ENST00000334060 MAS1LP35410 378 aa12.92□□□□□ -0.34
SHOX-201ENST00000334060 CHRNA7P36544 502 aa12.92□□□□□ -0.34
SHOX-201ENST00000334060 DEFA6Q01524 100 aa12.92□□□□□ -0.34
SHOX-201ENST00000334060 MLANAQ16655 118 aa12.92□□□□□ -0.34
SHOX-201ENST00000334060 ARSJQ5FYB0 599 aaPredicted RBP12.92□□□□□ -0.34
SHOX-201ENST00000334060 OR5B3Q8NH48 314 aa12.92□□□□□ -0.34
SHOX-201ENST00000334060 DTD1Q8TEA8 209 aa12.92□□□□□ -0.34
SHOX-201ENST00000334060 BSCL2Q96G97 398 aaPredicted RBP12.92□□□□□ -0.34
SHOX-201ENST00000334060 ZNF257Q9Y2Q1 563 aa12.92□□□□□ -0.34
SHOX-201ENST00000334060 HAX1O00165 279 aa12.91□□□□□ -0.34
SHOX-201ENST00000334060 SYNGR2O43760 224 aa12.91□□□□□ -0.34
SHOX-201ENST00000334060 LYL1P12980 280 aa12.91□□□□□ -0.34
SHOX-201ENST00000334060 PPIFP30405 207 aaKnown RBP12.91□□□□□ -0.34
SHOX-201ENST00000334060 SPCS3P61009 180 aa12.91□□□□□ -0.34
SHOX-201ENST00000334060 CFHR3Q02985 330 aa12.91□□□□□ -0.34
SHOX-201ENST00000334060 HIST1H2BAQ96A08 127 aa12.91□□□□□ -0.34
SHOX-201ENST00000334060 P2RX4Q99571 388 aa12.91□□□□□ -0.34
SHOX-201ENST00000334060 TRAV41A0A0B4J266 112 aa12.9□□□□□ -0.34
SHOX-201ENST00000334060 FBXO24O75426 580 aa12.9□□□□□ -0.34
SHOX-201ENST00000334060 IGF1P05019 195 aa12.9□□□□□ -0.34
SHOX-201ENST00000334060 FABP9Q0Z7S8 132 aa12.9□□□□□ -0.34
SHOX-201ENST00000334060 TCTEX1D4Q5JR98 221 aa12.9□□□□□ -0.34
SHOX-201ENST00000334060 JMJD8Q96S16 334 aa12.9□□□□□ -0.34
SHOX-201ENST00000334060 SPIN2AQ99865 258 aa12.9□□□□□ -0.34
SHOX-201ENST00000334060 SPIN2BQ9BPZ2 258 aa12.9□□□□□ -0.34
SHOX-201ENST00000334060 PLEKHA3Q9HB20 300 aa12.9□□□□□ -0.34
SHOX-201ENST00000334060 COL6A5A8TX70 2615 aa12.9□□□□□ -0.34
SHOX-201ENST00000334060 HKR1P10072 659 aa12.9□□□□□ -0.34
SHOX-201ENST00000334060 PDLIM3Q53GG5 364 aaPredicted RBP12.9□□□□□ -0.34
SHOX-201ENST00000334060 C18orf65Q6ZTR6 163 aa12.9□□□□□ -0.34
SHOX-201ENST00000334060 PPP1R14DQ9NXH3 145 aa12.9□□□□□ -0.34
SHOX-201ENST00000334060 ZNF705EA8MWA4 302 aaPredicted RBP12.89□□□□□ -0.35
SHOX-201ENST00000334060 RNASE2P10153 161 aaKnown RBP12.89□□□□□ -0.35
SHOX-201ENST00000334060 TMEM267Q0VDI3 215 aaPredicted RBP12.89□□□□□ -0.35
SHOX-201ENST00000334060 RHEBQ15382 184 aa12.89□□□□□ -0.35
SHOX-201ENST00000334060 OR2C3Q8N628 320 aa12.89□□□□□ -0.35
SHOX-201ENST00000334060 OR52E5Q8NH55 327 aa12.89□□□□□ -0.35
SHOX-201ENST00000334060 FANCD2OSQ96PS1 177 aa12.89□□□□□ -0.35
SHOX-201ENST00000334060 WNT10AQ9GZT5 417 aa12.89□□□□□ -0.35
SHOX-201ENST00000334060 STAB1Q9NY15 2570 aa12.89□□□□□ -0.35
SHOX-201ENST00000334060 FAM24AA6NFZ4 105 aa12.89□□□□□ -0.35
SHOX-201ENST00000334060 C15orf62A8K5M9 175 aa12.89□□□□□ -0.35
SHOX-201ENST00000334060 IGHV3-23P01764 117 aa12.89□□□□□ -0.35
SHOX-201ENST00000334060 SFTA3P0C7M3 94 aa12.89□□□□□ -0.35
SHOX-201ENST00000334060 ARL16Q0P5N6 197 aa12.89□□□□□ -0.35
SHOX-201ENST00000334060 HAPLN4Q86UW8 402 aa12.89□□□□□ -0.35
SHOX-201ENST00000334060 ZFP82Q8N141 532 aa12.89□□□□□ -0.35
SHOX-201ENST00000334060 LILRB2Q8N423 598 aa12.89□□□□□ -0.35
SHOX-201ENST00000334060 OR2T6Q8NHC8 308 aa12.89□□□□□ -0.35
SHOX-201ENST00000334060 AQP10Q96PS8 301 aa12.89□□□□□ -0.35
SHOX-201ENST00000334060 SMDT1Q9H4I9 107 aa12.89□□□□□ -0.35
SHOX-201ENST00000334060 HEYLQ9NQ87 328 aaPredicted RBP12.89□□□□□ -0.35
SHOX-201ENST00000334060 MRPL36Q9P0J6 103 aaKnown RBP12.89□□□□□ -0.35
SHOX-201ENST00000334060 SPANXN5Q5MJ07 72 aa12.88□□□□□ -0.35
SHOX-201ENST00000334060 KLHDC1Q8N7A1 406 aa12.88□□□□□ -0.35
SHOX-201ENST00000334060 DEDDO75618 318 aa12.87□□□□□ -0.35
SHOX-201ENST00000334060 RAB5AP20339 215 aa12.87□□□□□ -0.35
SHOX-201ENST00000334060 CRIP2P52943 208 aaPredicted RBP12.87□□□□□ -0.35
SHOX-201ENST00000334060 WIPF2Q8TF74 440 aaPredicted RBP12.87□□□□□ -0.35
SHOX-201ENST00000334060 PFDN5Q99471 154 aa12.87□□□□□ -0.35
SHOX-201ENST00000334060 FKBP11Q9NYL4 201 aa12.87□□□□□ -0.35
SHOX-201ENST00000334060 IGSF23A1L1A6 192 aa12.87□□□□□ -0.35
SHOX-201ENST00000334060 OR2J3O76001 311 aa12.87□□□□□ -0.35
SHOX-201ENST00000334060 SULT1A2P50226 295 aa12.87□□□□□ -0.35
SHOX-201ENST00000334060 BSXQ3C1V8 233 aa12.87□□□□□ -0.35
SHOX-201ENST00000334060 PRSS54Q6PEW0 395 aa12.87□□□□□ -0.35
SHOX-201ENST00000334060 DCUN1D4Q92564 292 aa12.87□□□□□ -0.35
SHOX-201ENST00000334060 FNDC4Q9H6D8 234 aaPredicted RBP12.87□□□□□ -0.35
SHOX-201ENST00000334060 CYTL1Q9NRR1 136 aa12.87□□□□□ -0.35
SHOX-201ENST00000334060 ZNF355PQ9NSJ1 428 aa12.87□□□□□ -0.35
SHOX-201ENST00000334060 CACFD1Q9UGQ2 172 aa12.87□□□□□ -0.35
SHOX-201ENST00000334060 NDUFB8O95169 186 aa12.86□□□□□ -0.35
SHOX-201ENST00000334060 RPLP1P05386 114 aaKnown RBP12.86□□□□□ -0.35
SHOX-201ENST00000334060 METTL15P1P0C7V9 234 aa12.86□□□□□ -0.35
SHOX-201ENST00000334060 PPT1P50897 306 aa12.86□□□□□ -0.35
SHOX-201ENST00000334060 PROK1P58294 105 aa12.86□□□□□ -0.35
SHOX-201ENST00000334060 AKIRIN2Q53H80 203 aa12.86□□□□□ -0.35
SHOX-201ENST00000334060 TTC9CQ8N5M4 171 aa12.86□□□□□ -0.35
SHOX-201ENST00000334060 LYPD6BQ8NI32 183 aa12.86□□□□□ -0.35
SHOX-201ENST00000334060 OR5B12Q96R08 314 aa12.86□□□□□ -0.35
SHOX-201ENST00000334060 C16orf95Q9H693 158 aa12.86□□□□□ -0.35
SHOX-201ENST00000334060 PSENENQ9NZ42 101 aa12.86□□□□□ -0.35
SHOX-201ENST00000334060 VWFP04275 2813 aa12.86□□□□□ -0.35
SHOX-201ENST00000334060 CRYGCP07315 174 aa12.85□□□□□ -0.35
SHOX-201ENST00000334060 CD28P10747 220 aa12.85□□□□□ -0.35
SHOX-201ENST00000334060 S100A2P29034 98 aa12.85□□□□□ -0.35
SHOX-201ENST00000334060 BTNL8Q6UX41 500 aa12.85□□□□□ -0.35
SHOX-201ENST00000334060 SLC24A4Q8NFF2 622 aa12.85□□□□□ -0.35
SHOX-201ENST00000334060 FAM110DQ8TAY7 271 aaPredicted RBP12.85□□□□□ -0.35
SHOX-201ENST00000334060 PINX1Q96BK5 328 aaKnown RBP12.85□□□□□ -0.35
SHOX-201ENST00000334060 RNF114Q9Y508 228 aa12.85□□□□□ -0.35
SHOX-201ENST00000334060 F11RQ9Y624 299 aaKnown RBP12.85□□□□□ -0.35
SHOX-201ENST00000334060 TRRAPQ9Y4A5 3859 aa12.85□□□□□ -0.35
SHOX-201ENST00000334060 PSMB11A5LHX3 300 aa12.85□□□□□ -0.35
SHOX-201ENST00000334060 PMS2P5A8MQ11 134 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms