RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 RBFOX3A6NFN3 312 aa14.86□□□□□ -0.03
EXOSC3-201ENST00000327304 C9JQL5 133 aa14.86□□□□□ -0.03
EXOSC3-201ENST00000327304 HOXA3O43365 443 aaPredicted RBP14.86□□□□□ -0.03
EXOSC3-201ENST00000327304 SFTA3P0C7M3 94 aa14.86□□□□□ -0.03
EXOSC3-201ENST00000327304 SRD5A1P18405 259 aa14.86□□□□□ -0.03
EXOSC3-201ENST00000327304 CD69Q07108 199 aa14.86□□□□□ -0.03
EXOSC3-201ENST00000327304 RAB31Q13636 194 aa14.86□□□□□ -0.03
EXOSC3-201ENST00000327304 PLGLAQ15195 96 aa14.86□□□□□ -0.03
EXOSC3-201ENST00000327304 TNXAQ16473 311 aa14.86□□□□□ -0.03
EXOSC3-201ENST00000327304 MGST2Q99735 147 aa14.86□□□□□ -0.03
EXOSC3-201ENST00000327304 GGTLC1Q9BX51 225 aa14.86□□□□□ -0.03
EXOSC3-201ENST00000327304 SLC39A9Q9NUM3 307 aa14.86□□□□□ -0.03
EXOSC3-201ENST00000327304 CTXND1A0A1B0GTU2 59 aa14.85□□□□□ -0.03
EXOSC3-201ENST00000327304 FCN1O00602 326 aa14.85□□□□□ -0.03
EXOSC3-201ENST00000327304 CYB5BO43169 146 aa14.85□□□□□ -0.03
EXOSC3-201ENST00000327304 PMS2P11Q13670 270 aa14.85□□□□□ -0.03
EXOSC3-201ENST00000327304 TMEM144Q7Z5S9 345 aa14.85□□□□□ -0.03
EXOSC3-201ENST00000327304 SVBPQ8N300 66 aa14.85□□□□□ -0.03
EXOSC3-201ENST00000327304 Q8N9W7 124 aa14.85□□□□□ -0.03
EXOSC3-201ENST00000327304 ZNF114Q8NC26 417 aa14.85□□□□□ -0.03
EXOSC3-201ENST00000327304 SSMEM1Q8WWF3 244 aa14.85□□□□□ -0.03
EXOSC3-201ENST00000327304 ACTR3CQ9C0K3 210 aaPredicted RBP14.85□□□□□ -0.03
EXOSC3-201ENST00000327304 PLXNB1O43157 2135 aa14.85□□□□□ -0.03
EXOSC3-201ENST00000327304 OR13C7P0DN81 318 aa14.85□□□□□ -0.03
EXOSC3-201ENST00000327304 DEFA5Q01523 94 aa14.85□□□□□ -0.03
EXOSC3-201ENST00000327304 OR5R1Q8NH85 324 aa14.85□□□□□ -0.03
EXOSC3-201ENST00000327304 SRSF8Q9BRL6 282 aaKnown RBP14.85□□□□□ -0.03
EXOSC3-201ENST00000327304 C1RLQ9NZP8 487 aa14.85□□□□□ -0.03
EXOSC3-201ENST00000327304 MOB4Q9Y3A3 225 aa14.85□□□□□ -0.03
EXOSC3-201ENST00000327304 FN1P02751 2386 aaKnown RBP14.84□□□□□ -0.03
EXOSC3-201ENST00000327304 IGLC7A0M8Q6 106 aa14.84□□□□□ -0.03
EXOSC3-201ENST00000327304 MAP1LC3B2A6NCE7 125 aa14.84□□□□□ -0.03
EXOSC3-201ENST00000327304 PVRIGQ6DKI7 326 aa14.84□□□□□ -0.03
EXOSC3-201ENST00000327304 LCN15Q6UWW0 184 aa14.84□□□□□ -0.03
EXOSC3-201ENST00000327304 SSX7Q7RTT5 188 aa14.84□□□□□ -0.03
EXOSC3-201ENST00000327304 P2RX4Q99571 388 aa14.84□□□□□ -0.03
EXOSC3-201ENST00000327304 MAP1LC3BQ9GZQ8 125 aa14.84□□□□□ -0.03
EXOSC3-201ENST00000327304 PITPNC1Q9UKF7 332 aa14.84□□□□□ -0.03
EXOSC3-201ENST00000327304 SCO1O75880 301 aa14.83□□□□□ -0.04
EXOSC3-201ENST00000327304 RPL29P47914 159 aaKnown RBP14.83□□□□□ -0.04
EXOSC3-201ENST00000327304 SSBP2P81877 361 aaPredicted RBP14.83□□□□□ -0.04
EXOSC3-201ENST00000327304 ZNF506Q5JVG8 444 aa14.83□□□□□ -0.04
EXOSC3-201ENST00000327304 PXMP4Q9Y6I8 212 aa14.83□□□□□ -0.04
EXOSC3-201ENST00000327304 SH2D7A6NKC9 451 aaPredicted RBP14.82□□□□□ -0.04
EXOSC3-201ENST00000327304 SEC14L6B5MCN3 397 aa14.82□□□□□ -0.04
EXOSC3-201ENST00000327304 PPT1P50897 306 aa14.82□□□□□ -0.04
EXOSC3-201ENST00000327304 GNB1P62873 340 aa14.82□□□□□ -0.04
EXOSC3-201ENST00000327304 GAMTQ14353 236 aa14.82□□□□□ -0.04
EXOSC3-201ENST00000327304 KHDC3LQ587J8 217 aa14.82□□□□□ -0.04
EXOSC3-201ENST00000327304 C5orf56Q8N8D9 126 aa14.82□□□□□ -0.04
EXOSC3-201ENST00000327304 DUX5Q96PT3 197 aa14.82□□□□□ -0.04
EXOSC3-201ENST00000327304 SLC35B3Q9H1N7 401 aa14.82□□□□□ -0.04
EXOSC3-201ENST00000327304 VPREB3Q9UKI3 123 aa14.82□□□□□ -0.04
EXOSC3-201ENST00000327304 AMY1AP04745 511 aa14.82□□□□□ -0.04
EXOSC3-201ENST00000327304 SCGB2A2Q13296 93 aa14.82□□□□□ -0.04
EXOSC3-201ENST00000327304 RARRES2Q99969 163 aa14.82□□□□□ -0.04
EXOSC3-201ENST00000327304 HSPB1P04792 205 aaKnown RBP14.81□□□□□ -0.04
EXOSC3-201ENST00000327304 FAM122CQ6P4D5 195 aa14.81□□□□□ -0.04
EXOSC3-201ENST00000327304 RBMS3Q6XE24 437 aaKnown RBP14.81□□□□□ -0.04
EXOSC3-201ENST00000327304 SLC16A13Q7RTY0 426 aa14.81□□□□□ -0.04
EXOSC3-201ENST00000327304 SRSF12Q8WXF0 261 aaKnown RBP14.81□□□□□ -0.04
EXOSC3-201ENST00000327304 RAB24Q969Q5 203 aa14.81□□□□□ -0.04
EXOSC3-201ENST00000327304 SLC35E1Q96K37 410 aa14.81□□□□□ -0.04
EXOSC3-201ENST00000327304 RASL11BQ9BPW5 248 aa14.81□□□□□ -0.04
EXOSC3-201ENST00000327304 SLC25A22Q9H936 323 aa14.81□□□□□ -0.04
EXOSC3-201ENST00000327304 LOC102723971A0A1B0GUV8 181 aa14.8□□□□□ -0.04
EXOSC3-201ENST00000327304 TEX22C9J3V5 150 aa14.8□□□□□ -0.04
EXOSC3-201ENST00000327304 YIF1AO95070 293 aa14.8□□□□□ -0.04
EXOSC3-201ENST00000327304 IFNA1P01562 189 aa14.8□□□□□ -0.04
EXOSC3-201ENST00000327304 CDC34P49427 236 aaPredicted RBP14.8□□□□□ -0.04
EXOSC3-201ENST00000327304 B2MP61769 119 aa14.8□□□□□ -0.04
EXOSC3-201ENST00000327304 PRR20EP86478 221 aa14.8□□□□□ -0.04
EXOSC3-201ENST00000327304 PRR20CP86479 221 aa14.8□□□□□ -0.04
EXOSC3-201ENST00000327304 PRR20DP86480 221 aa14.8□□□□□ -0.04
EXOSC3-201ENST00000327304 PRR20BP86481 221 aa14.8□□□□□ -0.04
EXOSC3-201ENST00000327304 PRR20AP86496 221 aa14.8□□□□□ -0.04
EXOSC3-201ENST00000327304 ICAM4Q14773 271 aa14.8□□□□□ -0.04
EXOSC3-201ENST00000327304 GUCA2BQ16661 112 aa14.8□□□□□ -0.04
EXOSC3-201ENST00000327304 HAGHQ16775 308 aa14.8□□□□□ -0.04
EXOSC3-201ENST00000327304 MIC13Q5XKP0 118 aa14.8□□□□□ -0.04
EXOSC3-201ENST00000327304 CORTO00230 105 aa14.8□□□□□ -0.04
EXOSC3-201ENST00000327304 SNAPINO95295 136 aa14.8□□□□□ -0.04
EXOSC3-201ENST00000327304 HLA-DRB1P01911 266 aa14.8□□□□□ -0.04
EXOSC3-201ENST00000327304 FGF8P55075 233 aaPredicted RBP14.8□□□□□ -0.04
EXOSC3-201ENST00000327304 ETFRF1Q6IPR1 90 aa14.8□□□□□ -0.04
EXOSC3-201ENST00000327304 C16orf82Q7Z2V1 217 aa14.8□□□□□ -0.04
EXOSC3-201ENST00000327304 OR1P1Q8NH06 330 aa14.8□□□□□ -0.04
EXOSC3-201ENST00000327304 HSPB9Q9BQS6 159 aa14.8□□□□□ -0.04
EXOSC3-201ENST00000327304 NKX6-2Q9C056 277 aaPredicted RBP14.8□□□□□ -0.04
EXOSC3-201ENST00000327304 ESM1Q9NQ30 184 aa14.8□□□□□ -0.04
EXOSC3-201ENST00000327304 GNG13Q9P2W3 67 aa14.8□□□□□ -0.04
EXOSC3-201ENST00000327304 SLC45A2Q9UMX9 530 aa14.8□□□□□ -0.04
EXOSC3-201ENST00000327304 DNAJC9-AS1A6NH13 148 aa14.79□□□□□ -0.04
EXOSC3-201ENST00000327304 TSPAN9O75954 239 aa14.79□□□□□ -0.04
EXOSC3-201ENST00000327304 CX3CL1P78423 397 aa14.79□□□□□ -0.04
EXOSC3-201ENST00000327304 NDPQ00604 133 aa14.79□□□□□ -0.04
EXOSC3-201ENST00000327304 ATRAIDQ6UW56 229 aa14.79□□□□□ -0.04
EXOSC3-201ENST00000327304 TMEM86BQ8N661 226 aa14.79□□□□□ -0.04
EXOSC3-201ENST00000327304 STPG3Q8N7X2 389 aa14.79□□□□□ -0.04
EXOSC3-201ENST00000327304 TEP1Q99973 2627 aaKnown RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms