RNA–Protein interactions for RNA: ENST00000325404.2

SOX2-201, Transcript of SRY-box 2, humanhuman

APPRIS P1 BASIC

Gene SOX2, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-201ENST00000325404 PDPNQ86YL7 162 aa16.11■□□□□ 0.17
SOX2-201ENST00000325404 FLYWCH2Q96CP2 140 aaKnown RBP16.11■□□□□ 0.17
SOX2-201ENST00000325404 SLC25A2Q9BXI2 301 aa16.11■□□□□ 0.17
SOX2-201ENST00000325404 Q9UFV3 132 aa16.11■□□□□ 0.17
SOX2-201ENST00000325404 ZNF835Q9Y2P0 537 aa16.11■□□□□ 0.17
SOX2-201ENST00000325404 RAI1Q7Z5J4 1906 aaPredicted RBP16.11■□□□□ 0.17
SOX2-201ENST00000325404 HLA-DQA1P01909 254 aa16.1■□□□□ 0.17
SOX2-201ENST00000325404 GATA2P23769 480 aaPredicted RBP16.1■□□□□ 0.17
SOX2-201ENST00000325404 BRS3P32247 399 aa16.1■□□□□ 0.17
SOX2-201ENST00000325404 FAM27E3Q08E93 113 aa16.1■□□□□ 0.17
SOX2-201ENST00000325404 RASL11AQ6T310 242 aa16.1■□□□□ 0.17
SOX2-201ENST00000325404 TMEM108Q6UXF1 575 aa16.1■□□□□ 0.17
SOX2-201ENST00000325404 DMRTC2Q8IXT2 367 aaPredicted RBP16.1■□□□□ 0.17
SOX2-201ENST00000325404 OR4C13Q8NGP0 309 aa16.1■□□□□ 0.17
SOX2-201ENST00000325404 HSPB9Q9BQS6 159 aa16.1■□□□□ 0.17
SOX2-201ENST00000325404 SNHG12Q9BXW3 62 aa16.1■□□□□ 0.17
SOX2-201ENST00000325404 SH3BGRL2Q9UJC5 107 aa16.1■□□□□ 0.17
SOX2-201ENST00000325404 M0QZK8 103 aa16.1■□□□□ 0.17
SOX2-201ENST00000325404 EREGO14944 169 aa16.1■□□□□ 0.17
SOX2-201ENST00000325404 AMY1AP04745 511 aa16.1■□□□□ 0.17
SOX2-201ENST00000325404 SUB1P53999 127 aaKnown RBP eCLIP16.1■□□□□ 0.17
SOX2-201ENST00000325404 IBA57Q5T440 356 aaKnown RBP16.1■□□□□ 0.17
SOX2-201ENST00000325404 FAM231DQ6ZW35 169 aa16.1■□□□□ 0.17
SOX2-201ENST00000325404 OR10W1Q8NGF6 305 aa16.1■□□□□ 0.17
SOX2-201ENST00000325404 NAT8BQ9UHF3 227 aa16.1■□□□□ 0.17
SOX2-201ENST00000325404 COL8A2P25067 703 aa16.09■□□□□ 0.17
SOX2-201ENST00000325404 TMEM186Q96B77 213 aa16.09■□□□□ 0.17
SOX2-201ENST00000325404 RNASE7Q9H1E1 156 aaKnown RBP16.09■□□□□ 0.17
SOX2-201ENST00000325404 C17orf100A8MU93 164 aa16.09■□□□□ 0.17
SOX2-201ENST00000325404 REG1AP05451 166 aa16.09■□□□□ 0.17
SOX2-201ENST00000325404 RBPJQ06330 500 aa16.09■□□□□ 0.17
SOX2-201ENST00000325404 MLANAQ16655 118 aa16.09■□□□□ 0.17
SOX2-201ENST00000325404 SSX8Q7RTT4 187 aa16.09■□□□□ 0.17
SOX2-201ENST00000325404 TGIF2LXQ8IUE1 241 aa16.09■□□□□ 0.17
SOX2-201ENST00000325404 THAP8Q8NA92 274 aa16.09■□□□□ 0.17
SOX2-201ENST00000325404 RND1Q92730 232 aa16.09■□□□□ 0.17
SOX2-201ENST00000325404 NEU1Q99519 415 aa16.09■□□□□ 0.17
SOX2-201ENST00000325404 GNB4Q9HAV0 340 aa16.09■□□□□ 0.17
SOX2-201ENST00000325404 CADP27708 2225 aa16.09■□□□□ 0.17
SOX2-201ENST00000325404 GPX1P07203 203 aa16.08■□□□□ 0.17
SOX2-201ENST00000325404 ZNF124Q15973 351 aa16.08■□□□□ 0.17
SOX2-201ENST00000325404 TMEM183BQ1AE95 376 aa16.08■□□□□ 0.17
SOX2-201ENST00000325404 TOMM20LQ6UXN7 152 aa16.08■□□□□ 0.17
SOX2-201ENST00000325404 C22orf34Q6ZV56 151 aa16.08■□□□□ 0.17
SOX2-201ENST00000325404 WIPF2Q8TF74 440 aaPredicted RBP16.08■□□□□ 0.17
SOX2-201ENST00000325404 SAMD10Q9BYL1 202 aa16.08■□□□□ 0.17
SOX2-201ENST00000325404 ZNF430Q9H8G1 570 aaPredicted RBP16.08■□□□□ 0.17
SOX2-201ENST00000325404 BSNQ9UPA5 3926 aa16.08■□□□□ 0.16
SOX2-201ENST00000325404 IZUMO1RA6ND01 250 aa16.08■□□□□ 0.16
SOX2-201ENST00000325404 UBE2L3P68036 154 aaKnown RBP16.08■□□□□ 0.16
SOX2-201ENST00000325404 SIGLECL1Q8N7X8 197 aa16.08■□□□□ 0.16
SOX2-201ENST00000325404 ZNRD1Q9P1U0 126 aa16.08■□□□□ 0.16
SOX2-201ENST00000325404 FRMD6-AS1P0C7T7 363 aa16.07■□□□□ 0.16
SOX2-201ENST00000325404 ZNF137PP52743 207 aa16.07■□□□□ 0.16
SOX2-201ENST00000325404 TMEM200BQ69YZ2 307 aa16.07■□□□□ 0.16
SOX2-201ENST00000325404 MIEN1Q9BRT3 115 aa16.07■□□□□ 0.16
SOX2-201ENST00000325404 CBLN4Q9NTU7 201 aa16.07■□□□□ 0.16
SOX2-201ENST00000325404 DYSFO75923 2080 aa16.07■□□□□ 0.16
SOX2-201ENST00000325404 TCRBV4S1A1TA0A5B7 111 aa16.07■□□□□ 0.16
SOX2-201ENST00000325404 CHRNB4P30926 498 aa16.07■□□□□ 0.16
SOX2-201ENST00000325404 BPIFB3P59826 476 aa16.07■□□□□ 0.16
SOX2-201ENST00000325404 OR2T6Q8NHC8 308 aa16.07■□□□□ 0.16
SOX2-201ENST00000325404 TNFRSF13BO14836 293 aaPredicted RBP16.06■□□□□ 0.16
SOX2-201ENST00000325404 CHRDL1Q9BU40 450 aa16.06■□□□□ 0.16
SOX2-201ENST00000325404 ZNF586Q9NXT0 402 aa16.06■□□□□ 0.16
SOX2-201ENST00000325404 TCAPO15273 167 aa16.06■□□□□ 0.16
SOX2-201ENST00000325404 COX7A2P2O60397 106 aa16.06■□□□□ 0.16
SOX2-201ENST00000325404 C10orf113Q5VZT2 155 aa16.06■□□□□ 0.16
SOX2-201ENST00000325404 ST6GALNAC6Q969X2 333 aa16.06■□□□□ 0.16
SOX2-201ENST00000325404 CCL8P80075 99 aa16.05■□□□□ 0.16
SOX2-201ENST00000325404 ADIPOQQ15848 244 aa16.05■□□□□ 0.16
SOX2-201ENST00000325404 MBD6Q96DN6 1003 aa16.05■□□□□ 0.16
SOX2-201ENST00000325404 KCNS1Q96KK3 526 aa16.05■□□□□ 0.16
SOX2-201ENST00000325404 PAXXQ9BUH6 204 aa16.05■□□□□ 0.16
SOX2-201ENST00000325404 WASHC3Q9Y3C0 194 aa16.05■□□□□ 0.16
SOX2-201ENST00000325404 AMMECR1Q9Y4X0 333 aaPredicted RBP16.05■□□□□ 0.16
SOX2-201ENST00000325404 SPTA1P02549 2419 aa16.05■□□□□ 0.16
SOX2-201ENST00000325404 PPIAL4EA0A075B759 164 aa16.05■□□□□ 0.16
SOX2-201ENST00000325404 CGB1A6NKQ9 187 aa16.05■□□□□ 0.16
SOX2-201ENST00000325404 PPIAL4DF5H284 164 aa16.05■□□□□ 0.16
SOX2-201ENST00000325404 C16orf97H3BN30 126 aa16.05■□□□□ 0.16
SOX2-201ENST00000325404 IGLV2-23P01705 113 aa16.05■□□□□ 0.16
SOX2-201ENST00000325404 PPIAL4FP0DN26 164 aa16.05■□□□□ 0.16
SOX2-201ENST00000325404 WT1-ASQ06250 92 aa16.05■□□□□ 0.16
SOX2-201ENST00000325404 FXYD3Q14802 87 aa16.05■□□□□ 0.16
SOX2-201ENST00000325404 PVRIGQ6DKI7 326 aa16.05■□□□□ 0.16
SOX2-201ENST00000325404 STXBP6Q8NFX7 210 aa16.05■□□□□ 0.16
SOX2-201ENST00000325404 PPIAL4AQ9Y536 164 aa16.05■□□□□ 0.16
SOX2-201ENST00000325404 TNCP24821 2201 aa16.04■□□□□ 0.16
SOX2-201ENST00000325404 F2Z2F3 143 aa16.04■□□□□ 0.16
SOX2-201ENST00000325404 TMEM178BH3BS89 294 aa16.04■□□□□ 0.16
SOX2-201ENST00000325404 MGST1P10620 155 aaKnown RBP16.04■□□□□ 0.16
SOX2-201ENST00000325404 COMPP49747 757 aaPredicted RBP16.04■□□□□ 0.16
SOX2-201ENST00000325404 SMIM12Q96EX1 92 aa16.04■□□□□ 0.16
SOX2-201ENST00000325404 ZNF355PQ9NSJ1 428 aa16.04■□□□□ 0.16
SOX2-201ENST00000325404 TRAV5A0A0B4J249 113 aa16.04■□□□□ 0.16
SOX2-201ENST00000325404 FSTL3O95633 263 aa16.04■□□□□ 0.16
SOX2-201ENST00000325404 CCL3L1P16619 93 aa16.04■□□□□ 0.16
SOX2-201ENST00000325404 MC5RP33032 325 aa16.04■□□□□ 0.16
SOX2-201ENST00000325404 ZNF329Q86UD4 541 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms