RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 APCSP02743 223 aa10.51□□□□□ -0.73
HMGCS1-201ENST00000325110 DNLZQ5SXM8 178 aa10.51□□□□□ -0.73
HMGCS1-201ENST00000325110 C1orf194Q5T5A4 169 aa10.51□□□□□ -0.73
HMGCS1-201ENST00000325110 DDB2Q92466 427 aa10.51□□□□□ -0.73
HMGCS1-201ENST00000325110 TPPP3Q9BW30 176 aa10.51□□□□□ -0.73
HMGCS1-201ENST00000325110 MUC6Q6W4X9 2439 aa10.51□□□□□ -0.73
HMGCS1-201ENST00000325110 ZNF137PP52743 207 aa10.5□□□□□ -0.73
HMGCS1-201ENST00000325110 BPIFB3P59826 476 aa10.5□□□□□ -0.73
HMGCS1-201ENST00000325110 CD69Q07108 199 aa10.5□□□□□ -0.73
HMGCS1-201ENST00000325110 C22orf15Q8WYQ4 148 aa10.5□□□□□ -0.73
HMGCS1-201ENST00000325110 V9GYV3 84 aa10.5□□□□□ -0.73
HMGCS1-201ENST00000325110 ANKHD1Q8IWZ3 2542 aaKnown RBP10.5□□□□□ -0.73
HMGCS1-201ENST00000325110 K7EM74 188 aa10.5□□□□□ -0.73
HMGCS1-201ENST00000325110 AREGP15514 252 aa10.5□□□□□ -0.73
HMGCS1-201ENST00000325110 COX7A1P24310 79 aa10.5□□□□□ -0.73
HMGCS1-201ENST00000325110 PRR20EP86478 221 aa10.5□□□□□ -0.73
HMGCS1-201ENST00000325110 PRR20CP86479 221 aa10.5□□□□□ -0.73
HMGCS1-201ENST00000325110 PRR20DP86480 221 aa10.5□□□□□ -0.73
HMGCS1-201ENST00000325110 PRR20BP86481 221 aa10.5□□□□□ -0.73
HMGCS1-201ENST00000325110 PRR20AP86496 221 aa10.5□□□□□ -0.73
HMGCS1-201ENST00000325110 WDR73Q6P4I2 378 aa10.5□□□□□ -0.73
HMGCS1-201ENST00000325110 FAM215AQ9Y5M1 114 aa10.5□□□□□ -0.73
HMGCS1-201ENST00000325110 ATRXP46100 2492 aa10.5□□□□□ -0.73
HMGCS1-201ENST00000325110 PRRG2O14669 202 aa10.5□□□□□ -0.73
HMGCS1-201ENST00000325110 SUB1P53999 127 aaKnown RBP eCLIP10.5□□□□□ -0.731e-8■■■■□ 20.9
HMGCS1-201ENST00000325110 NUTF2P61970 127 aaKnown RBP10.5□□□□□ -0.73
HMGCS1-201ENST00000325110 GUSBP1Q15486 140 aa10.5□□□□□ -0.73
HMGCS1-201ENST00000325110 RCHY1Q96PM5 261 aa10.5□□□□□ -0.73
HMGCS1-201ENST00000325110 NRN1Q9NPD7 142 aa10.5□□□□□ -0.73
HMGCS1-201ENST00000325110 ASCL3Q9NQ33 180 aa10.5□□□□□ -0.73
HMGCS1-201ENST00000325110 DLL1O00548 723 aa10.49□□□□□ -0.73
HMGCS1-201ENST00000325110 RNASE2P10153 161 aaKnown RBP10.49□□□□□ -0.73
HMGCS1-201ENST00000325110 Q56UQ5 140 aa10.49□□□□□ -0.73
HMGCS1-201ENST00000325110 LRRC10Q5BKY1 277 aa10.49□□□□□ -0.73
HMGCS1-201ENST00000325110 ZNF439Q8NDP4 499 aa10.49□□□□□ -0.73
HMGCS1-201ENST00000325110 FAM168AQ92567 244 aa10.49□□□□□ -0.73
HMGCS1-201ENST00000325110 NEUROG1Q92886 237 aa10.49□□□□□ -0.73
HMGCS1-201ENST00000325110 PPIAL4EA0A075B759 164 aa10.49□□□□□ -0.73
HMGCS1-201ENST00000325110 E7EUB6 86 aa10.49□□□□□ -0.73
HMGCS1-201ENST00000325110 PPIAL4DF5H284 164 aa10.49□□□□□ -0.73
HMGCS1-201ENST00000325110 PPIAL4FP0DN26 164 aa10.49□□□□□ -0.73
HMGCS1-201ENST00000325110 FOXA3P55318 350 aaPredicted RBP10.49□□□□□ -0.73
HMGCS1-201ENST00000325110 YPEL3P61236 119 aaPredicted RBP10.49□□□□□ -0.73
HMGCS1-201ENST00000325110 LBHQ53QV2 105 aaPredicted RBP10.49□□□□□ -0.73
HMGCS1-201ENST00000325110 DAZAP1Q96EP5 407 aaKnown RBP10.49□□□□□ -0.73
HMGCS1-201ENST00000325110 SLC25A33Q9BSK2 321 aa10.49□□□□□ -0.73
HMGCS1-201ENST00000325110 FBXL7Q9UJT9 491 aa10.49□□□□□ -0.73
HMGCS1-201ENST00000325110 PPIAL4AQ9Y536 164 aa10.49□□□□□ -0.73
HMGCS1-201ENST00000325110 PGPA6NDG6 321 aa10.49□□□□□ -0.73
HMGCS1-201ENST00000325110 MBD3L4A6NDZ8 208 aaPredicted RBP10.49□□□□□ -0.73
HMGCS1-201ENST00000325110 MBD3L3A6NE82 208 aaPredicted RBP10.49□□□□□ -0.73
HMGCS1-201ENST00000325110 MBD3L5A6NJ08 208 aaPredicted RBP10.49□□□□□ -0.73
HMGCS1-201ENST00000325110 TMPRSS3P57727 454 aa10.49□□□□□ -0.73
HMGCS1-201ENST00000325110 SPATA45Q537H7 98 aa10.49□□□□□ -0.73
HMGCS1-201ENST00000325110 Q6ZN92 141 aa10.49□□□□□ -0.73
HMGCS1-201ENST00000325110 ZNF788Q6ZQV5 615 aa10.49□□□□□ -0.73
HMGCS1-201ENST00000325110 LINC00305Q7Z4B0 112 aa10.49□□□□□ -0.73
HMGCS1-201ENST00000325110 PDPNQ86YL7 162 aa10.49□□□□□ -0.73
HMGCS1-201ENST00000325110 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.49□□□□□ -0.73
HMGCS1-201ENST00000325110 BEND2Q8NDZ0 799 aa10.49□□□□□ -0.73
HMGCS1-201ENST00000325110 MBD3L2Q8NHZ7 208 aaPredicted RBP10.49□□□□□ -0.73
HMGCS1-201ENST00000325110 GSX1Q9H4S2 264 aaPredicted RBP10.49□□□□□ -0.73
HMGCS1-201ENST00000325110 C9JCJ5 164 aa10.48□□□□□ -0.73
HMGCS1-201ENST00000325110 LCN12Q6JVE5 192 aa10.48□□□□□ -0.73
HMGCS1-201ENST00000325110 C1orf174Q8IYL3 243 aa10.48□□□□□ -0.73
HMGCS1-201ENST00000325110 SFXN3Q9BWM7 321 aa10.48□□□□□ -0.73
HMGCS1-201ENST00000325110 TP53TG3Q9ULZ0 132 aa10.48□□□□□ -0.73
HMGCS1-201ENST00000325110 ATMQ13315 3056 aa10.48□□□□□ -0.73
HMGCS1-201ENST00000325110 VMA21Q3ZAQ7 101 aa10.48□□□□□ -0.73
HMGCS1-201ENST00000325110 SLC25A48Q6ZT89 311 aaKnown RBP10.48□□□□□ -0.73
HMGCS1-201ENST00000325110 ZNF430Q9H8G1 570 aaPredicted RBP10.48□□□□□ -0.73
HMGCS1-201ENST00000325110 TPSG1Q9NRR2 321 aa10.48□□□□□ -0.73
HMGCS1-201ENST00000325110 A0A1W2PRD5 423 aa10.47□□□□□ -0.73
HMGCS1-201ENST00000325110 A0A1W2PRF3 423 aa10.47□□□□□ -0.73
HMGCS1-201ENST00000325110 A0A1W2PRM7 423 aa10.47□□□□□ -0.73
HMGCS1-201ENST00000325110 VSTM5A8MXK1 200 aa10.47□□□□□ -0.73
HMGCS1-201ENST00000325110 C16orf97H3BN30 126 aa10.47□□□□□ -0.73
HMGCS1-201ENST00000325110 AMY1AP04745 511 aa10.47□□□□□ -0.73
HMGCS1-201ENST00000325110 RPLP1P05386 114 aaKnown RBP10.47□□□□□ -0.73
HMGCS1-201ENST00000325110 LYZP61626 148 aa10.47□□□□□ -0.73
HMGCS1-201ENST00000325110 BSPH1Q075Z2 132 aa10.47□□□□□ -0.73
HMGCS1-201ENST00000325110 LYPD2Q6UXB3 125 aa10.47□□□□□ -0.73
HMGCS1-201ENST00000325110 DYSFO75923 2080 aa10.47□□□□□ -0.73
HMGCS1-201ENST00000325110 M0R2Z0 102 aa10.47□□□□□ -0.73
HMGCS1-201ENST00000325110 ISLRO14498 428 aa10.47□□□□□ -0.73
HMGCS1-201ENST00000325110 HNRNPA3P51991 378 aaKnown RBP10.47□□□□□ -0.73
HMGCS1-201ENST00000325110 OR4C13Q8NGP0 309 aa10.47□□□□□ -0.73
HMGCS1-201ENST00000325110 TNFRSF19Q9NS68 423 aa10.47□□□□□ -0.73
HMGCS1-201ENST00000325110 LYNX1G3V0Z9 82 aa10.47□□□□□ -0.73
HMGCS1-201ENST00000325110 LYNX1P0DP58 116 aa10.47□□□□□ -0.73
HMGCS1-201ENST00000325110 CD24P25063 80 aa10.47□□□□□ -0.73
HMGCS1-201ENST00000325110 ZNF124Q15973 351 aa10.47□□□□□ -0.73
HMGCS1-201ENST00000325110 ZNF503Q96F45 646 aa10.47□□□□□ -0.73
HMGCS1-201ENST00000325110 CDC42EP3Q9UKI2 254 aa10.47□□□□□ -0.73
HMGCS1-201ENST00000325110 HLA-DQA1P01909 254 aa10.46□□□□□ -0.73
HMGCS1-201ENST00000325110 MT-ND6P03923 174 aa10.46□□□□□ -0.73
HMGCS1-201ENST00000325110 CSN3P07498 182 aa10.46□□□□□ -0.73
HMGCS1-201ENST00000325110 CX3CL1P78423 397 aa10.46□□□□□ -0.73
HMGCS1-201ENST00000325110 TCF24Q7RTU0 167 aa10.46□□□□□ -0.73
HMGCS1-201ENST00000325110 KIR3DL3Q8N743 410 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms