RNA–Protein interactions for RNA: ENST00000323926.10

FN1-201, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-201ENST00000323926 TMEM42Q69YG0 159 aa10.63□□□□□ -0.71
FN1-201ENST00000323926 RRHO14718 337 aa10.62□□□□□ -0.71
FN1-201ENST00000323926 NKX2-8O15522 239 aa10.62□□□□□ -0.71
FN1-201ENST00000323926 LDLRAD2Q5SZI1 272 aa10.62□□□□□ -0.71
FN1-201ENST00000323926 OR10W1Q8NGF6 305 aa10.62□□□□□ -0.71
FN1-201ENST00000323926 NPIPB3Q92617 1050 aa10.62□□□□□ -0.71
FN1-201ENST00000323926 FBXL7Q9UJT9 491 aa10.62□□□□□ -0.71
FN1-201ENST00000323926 ST20Q9HBF5 79 aa10.62□□□□□ -0.71
FN1-201ENST00000323926 IGKV3D-15A0A087WSY6 115 aa10.62□□□□□ -0.71
FN1-201ENST00000323926 TRAV1-1A0A0B4J248 108 aa10.62□□□□□ -0.71
FN1-201ENST00000323926 HIGD1CA8MV81 97 aa10.62□□□□□ -0.71
FN1-201ENST00000323926 TMEM238C9JI98 176 aa10.62□□□□□ -0.71
FN1-201ENST00000323926 RHOGP84095 191 aa10.62□□□□□ -0.71
FN1-201ENST00000323926 RUNX1Q01196 453 aa10.62□□□□□ -0.71
FN1-201ENST00000323926 MRPL14Q6P1L8 145 aaKnown RBP10.62□□□□□ -0.71
FN1-201ENST00000323926 FOXI3A8MTJ6 420 aaPredicted RBP10.62□□□□□ -0.71
FN1-201ENST00000323926 M0R1W7 72 aa10.62□□□□□ -0.71
FN1-201ENST00000323926 LINC00114Q6XXX2 140 aa10.62□□□□□ -0.71
FN1-201ENST00000323926 HYAL3O43820 417 aaPredicted RBP10.62□□□□□ -0.71
FN1-201ENST00000323926 H2BFSP57053 126 aa10.62□□□□□ -0.71
FN1-201ENST00000323926 ICAM4Q14773 271 aa10.62□□□□□ -0.71
FN1-201ENST00000323926 FAM74A4Q5TZK3 123 aa10.62□□□□□ -0.71
FN1-201ENST00000323926 SSC4DQ8WTU2 575 aa10.62□□□□□ -0.71
FN1-201ENST00000323926 WDYHV1Q96HA8 205 aa10.62□□□□□ -0.71
FN1-201ENST00000323926 H7C2G1 150 aa10.62□□□□□ -0.71
FN1-201ENST00000323926 MS4A3Q96HJ5 214 aa10.62□□□□□ -0.71
FN1-201ENST00000323926 WDR87Q6ZQQ6 2873 aa10.62□□□□□ -0.71
FN1-201ENST00000323926 IGKV1D-33P01593 117 aa10.62□□□□□ -0.71
FN1-201ENST00000323926 IGKV1-33P01594 117 aa10.62□□□□□ -0.71
FN1-201ENST00000323926 TRBV7-9A0A0J9YWB2 115 aa10.61□□□□□ -0.71
FN1-201ENST00000323926 PGPEP1Q9NXJ5 209 aa10.61□□□□□ -0.71
FN1-201ENST00000323926 TRBV6-7A0A0A0MS04 114 aa10.61□□□□□ -0.71
FN1-201ENST00000323926 PDE6HQ13956 83 aa10.61□□□□□ -0.71
FN1-201ENST00000323926 FOXA2Q9Y261 457 aaPredicted RBP10.61□□□□□ -0.71
FN1-201ENST00000323926 A0A1B0GW64 132 aa10.61□□□□□ -0.71
FN1-201ENST00000323926 NAT1P18440 290 aa10.61□□□□□ -0.71
FN1-201ENST00000323926 MED19A0JLT2 244 aaPredicted RBP10.61□□□□□ -0.71
FN1-201ENST00000323926 LRRK2Q5S007 2527 aa10.61□□□□□ -0.71
FN1-201ENST00000323926 LTBP2Q14767 1821 aa10.61□□□□□ -0.71
FN1-201ENST00000323926 DPM2O94777 84 aa10.61□□□□□ -0.71
FN1-201ENST00000323926 Q9H3A6 140 aa10.61□□□□□ -0.71
FN1-201ENST00000323926 COLQQ9Y215 455 aaPredicted RBP10.6□□□□□ -0.71
FN1-201ENST00000323926 A0A1W2PR77 199 aa10.6□□□□□ -0.71
FN1-201ENST00000323926 A0A1W2PRD5 423 aa10.6□□□□□ -0.71
FN1-201ENST00000323926 A0A1W2PRF3 423 aa10.6□□□□□ -0.71
FN1-201ENST00000323926 A0A1W2PRM7 423 aa10.6□□□□□ -0.71
FN1-201ENST00000323926 ZIC3O60481 467 aa10.6□□□□□ -0.71
FN1-201ENST00000323926 MGST2Q99735 147 aa10.6□□□□□ -0.71
FN1-201ENST00000323926 PRADC1Q9BSG0 188 aa10.6□□□□□ -0.71
FN1-201ENST00000323926 MS4A6AQ9H2W1 248 aa10.6□□□□□ -0.71
FN1-201ENST00000323926 TMEM160Q9NX00 188 aa10.6□□□□□ -0.71
FN1-201ENST00000323926 CSRP3P50461 194 aa10.6□□□□□ -0.71
FN1-201ENST00000323926 EMP1P54849 157 aa10.6□□□□□ -0.71
FN1-201ENST00000323926 NIT1Q86X76 327 aa10.6□□□□□ -0.71
FN1-201ENST00000323926 IGKV1D-42A0A075B6H8 117 aa10.6□□□□□ -0.71
FN1-201ENST00000323926 C8orf46Q8TAG6 207 aa10.6□□□□□ -0.71
FN1-201ENST00000323926 C5orf30Q96GV9 206 aa10.6□□□□□ -0.71
FN1-201ENST00000323926 GREM1O60565 184 aa10.6□□□□□ -0.71
FN1-201ENST00000323926 C21orf62-AS1Q17RA5 79 aa10.6□□□□□ -0.71
FN1-201ENST00000323926 SPANXCQ9NY87 97 aa10.6□□□□□ -0.71
FN1-201ENST00000323926 HIVEP2P31629 2446 aa10.6□□□□□ -0.71
FN1-201ENST00000323926 TCF21O43680 179 aa10.6□□□□□ -0.71
FN1-201ENST00000323926 EIF3GO75821 320 aaKnown RBP eCLIP10.6□□□□□ -0.71
FN1-201ENST00000323926 LHX2P50458 406 aa10.6□□□□□ -0.71
FN1-201ENST00000323926 EFNB1P98172 346 aa10.6□□□□□ -0.71
FN1-201ENST00000323926 THSD7BQ9C0I4 1608 aa10.6□□□□□ -0.71
FN1-201ENST00000323926 TRGV2A0A075B6R0 118 aa10.59□□□□□ -0.71
FN1-201ENST00000323926 HBDP02042 147 aa10.59□□□□□ -0.71
FN1-201ENST00000323926 CA1P00915 261 aaPredicted RBP10.59□□□□□ -0.71
FN1-201ENST00000323926 OR9G4Q8NGQ1 327 aa10.59□□□□□ -0.71
FN1-201ENST00000323926 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.59□□□□□ -0.71
FN1-201ENST00000323926 IGFBP3P17936 291 aaPredicted RBP10.59□□□□□ -0.71
FN1-201ENST00000323926 FAM223BA6NKX1 122 aa10.59□□□□□ -0.71
FN1-201ENST00000323926 PATE3B3GLJ2 98 aa10.59□□□□□ -0.71
FN1-201ENST00000323926 AMBPP02760 352 aa10.59□□□□□ -0.71
FN1-201ENST00000323926 FAM223AQ8IWN6 122 aa10.59□□□□□ -0.71
FN1-201ENST00000323926 PLPPR1Q8TBJ4 325 aa10.59□□□□□ -0.71
FN1-201ENST00000323926 DNAJC30Q96LL9 226 aa10.59□□□□□ -0.71
FN1-201ENST00000323926 ATXN7O15265 892 aaPredicted RBP10.59□□□□□ -0.71
FN1-201ENST00000323926 RNF125Q96EQ8 232 aa10.59□□□□□ -0.71
FN1-201ENST00000323926 WNT2P09544 360 aa10.59□□□□□ -0.71
FN1-201ENST00000323926 PRCDQ00LT1 54 aa10.59□□□□□ -0.71
FN1-201ENST00000323926 C19orf48Q6RUI8 117 aa10.59□□□□□ -0.71
FN1-201ENST00000323926 LY96Q9Y6Y9 160 aa10.59□□□□□ -0.71
FN1-201ENST00000323926 SLC17A3O00476 420 aa10.59□□□□□ -0.71
FN1-201ENST00000323926 ZNF826PQ6ZT77 177 aa10.59□□□□□ -0.71
FN1-201ENST00000323926 A0A0G2JK05 382 aa10.58□□□□□ -0.72
FN1-201ENST00000323926 ZNF324BQ6AW86 544 aaPredicted RBP10.58□□□□□ -0.72
FN1-201ENST00000323926 SIGLEC5O15389 551 aa10.58□□□□□ -0.72
FN1-201ENST00000323926 TLNRD1Q9H1K6 362 aa10.58□□□□□ -0.72
FN1-201ENST00000323926 TRGV9Q99603 122 aa10.58□□□□□ -0.72
FN1-201ENST00000323926 CLDN16Q9Y5I7 305 aa10.58□□□□□ -0.72
FN1-201ENST00000323926 A8MXK9 166 aa10.58□□□□□ -0.72
FN1-201ENST00000323926 OR13C6PQ8NH95 151 aa10.58□□□□□ -0.72
FN1-201ENST00000323926 LINC01587Q99440 93 aa10.58□□□□□ -0.72
FN1-201ENST00000323926 PTPRSQ13332 1948 aa10.58□□□□□ -0.72
FN1-201ENST00000323926 TRAV14DV4A0A0A6YYC5 116 aa10.58□□□□□ -0.72
FN1-201ENST00000323926 ABHD17AQ96GS6 310 aa10.58□□□□□ -0.72
FN1-201ENST00000323926 LOC101059948A0A1B0GTJ6 334 aa10.58□□□□□ -0.72
FN1-201ENST00000323926 GGTLC3B5MD39 225 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms