RNA–Protein interactions for RNA: ENST00000323848.13

SRRM1-201, Transcript of serine and arginine repetitive matrix 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SRRM1, Length 4,011 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-201ENST00000323848 OR5B3Q8NH48 314 aa11.12□□□□□ -0.63
SRRM1-201ENST00000323848 TMEM133Q9H2Q1 129 aa11.12□□□□□ -0.63
SRRM1-201ENST00000323848 CTSZQ9UBR2 303 aa11.12□□□□□ -0.63
SRRM1-201ENST00000323848 PCSK5Q92824 1860 aa11.11□□□□□ -0.63
SRRM1-201ENST00000323848 PGPA6NDG6 321 aa11.11□□□□□ -0.63
SRRM1-201ENST00000323848 F2RL2O00254 374 aa11.11□□□□□ -0.63
SRRM1-201ENST00000323848 AREGP15514 252 aa11.11□□□□□ -0.63
SRRM1-201ENST00000323848 ZNF124Q15973 351 aa11.11□□□□□ -0.63
SRRM1-201ENST00000323848 ZNF506Q5JVG8 444 aa11.11□□□□□ -0.63
SRRM1-201ENST00000323848 GFI1BQ5VTD9 330 aa11.11□□□□□ -0.63
SRRM1-201ENST00000323848 DHRS7BQ6IAN0 325 aaPredicted RBP11.11□□□□□ -0.63
SRRM1-201ENST00000323848 HEPN1Q6WQI6 88 aa11.11□□□□□ -0.63
SRRM1-201ENST00000323848 TMEM186Q96B77 213 aa11.11□□□□□ -0.63
SRRM1-201ENST00000323848 PAXXQ9BUH6 204 aa11.11□□□□□ -0.63
SRRM1-201ENST00000323848 UPK2O00526 184 aa11.11□□□□□ -0.63
SRRM1-201ENST00000323848 PROP1O75360 226 aa11.11□□□□□ -0.63
SRRM1-201ENST00000323848 PRB1P04280 392 aa11.11□□□□□ -0.63
SRRM1-201ENST00000323848 USF1P22415 310 aaPredicted RBP11.11□□□□□ -0.63
SRRM1-201ENST00000323848 ZNF726P1Q15940 193 aa11.11□□□□□ -0.63
SRRM1-201ENST00000323848 PDPNQ86YL7 162 aa11.11□□□□□ -0.63
SRRM1-201ENST00000323848 LRBAP50851 2863 aa11.11□□□□□ -0.63
SRRM1-201ENST00000323848 IGLV3-9A0A075B6K5 115 aa11.11□□□□□ -0.63
SRRM1-201ENST00000323848 IGHV1-8P0DP01 117 aa11.11□□□□□ -0.63
SRRM1-201ENST00000323848 PMCHP20382 165 aa11.11□□□□□ -0.63
SRRM1-201ENST00000323848 GCHFRP30047 84 aa11.11□□□□□ -0.63
SRRM1-201ENST00000323848 CDPF1Q6NVV7 123 aa11.11□□□□□ -0.63
SRRM1-201ENST00000323848 IMMP2LQ96T52 175 aa11.11□□□□□ -0.63
SRRM1-201ENST00000323848 MANBALQ9NQG1 85 aa11.11□□□□□ -0.63
SRRM1-201ENST00000323848 ZNF331Q9NQX6 463 aaPredicted RBP11.11□□□□□ -0.63
SRRM1-201ENST00000323848 CA1P00915 261 aaPredicted RBP11.1□□□□□ -0.63
SRRM1-201ENST00000323848 CXCL1P09341 107 aa11.1□□□□□ -0.63
SRRM1-201ENST00000323848 CA7P43166 264 aa11.1□□□□□ -0.63
SRRM1-201ENST00000323848 LOXL3P58215 753 aa11.1□□□□□ -0.63
SRRM1-201ENST00000323848 CTAG1AP78358 180 aa11.1□□□□□ -0.63
SRRM1-201ENST00000323848 PMS2P11Q13670 270 aa11.1□□□□□ -0.63
SRRM1-201ENST00000323848 PSMG3Q9BT73 122 aaPredicted RBP11.1□□□□□ -0.63
SRRM1-201ENST00000323848 FCGR2BP31994 310 aaPredicted RBP11.1□□□□□ -0.63
SRRM1-201ENST00000323848 OR8I2Q8N0Y5 310 aa11.1□□□□□ -0.63
SRRM1-201ENST00000323848 TCTEX1D1Q8N7M0 179 aa11.1□□□□□ -0.63
SRRM1-201ENST00000323848 RBM14Q96PK6 669 aaKnown RBP11.1□□□□□ -0.63
SRRM1-201ENST00000323848 MGST2Q99735 147 aa11.1□□□□□ -0.63
SRRM1-201ENST00000323848 CBY3A6NI87 242 aa11.1□□□□□ -0.63
SRRM1-201ENST00000323848 OR2J3O76001 311 aa11.1□□□□□ -0.63
SRRM1-201ENST00000323848 CSN3P07498 182 aa11.1□□□□□ -0.63
SRRM1-201ENST00000323848 SOD3P08294 240 aa11.1□□□□□ -0.63
SRRM1-201ENST00000323848 S100A7P31151 101 aa11.1□□□□□ -0.63
SRRM1-201ENST00000323848 MC5RP33032 325 aa11.1□□□□□ -0.63
SRRM1-201ENST00000323848 GNG5P63218 68 aa11.1□□□□□ -0.63
SRRM1-201ENST00000323848 SRSF7Q16629 238 aaKnown RBP eCLIP11.1□□□□□ -0.632e-6■■■□□ 16.9
SRRM1-201ENST00000323848 BRD3OSQ6XYD6 125 aa11.1□□□□□ -0.63
SRRM1-201ENST00000323848 TMEM219Q86XT9 240 aa11.1□□□□□ -0.63
SRRM1-201ENST00000323848 GGTLC1Q9BX51 225 aa11.1□□□□□ -0.63
SRRM1-201ENST00000323848 IGHV2-26A0A0B4J1V2 119 aa11.09□□□□□ -0.63
SRRM1-201ENST00000323848 SERTM2A0A1B0GWG4 89 aa11.09□□□□□ -0.63
SRRM1-201ENST00000323848 ZNF785A8K8V0 405 aa11.09□□□□□ -0.63
SRRM1-201ENST00000323848 TCF23Q7RTU1 214 aa11.09□□□□□ -0.63
SRRM1-201ENST00000323848 LINC00305Q7Z4B0 112 aa11.09□□□□□ -0.63
SRRM1-201ENST00000323848 MMD2Q8IY49 270 aa11.09□□□□□ -0.63
SRRM1-201ENST00000323848 DNAJC4Q9NNZ3 241 aa11.09□□□□□ -0.63
SRRM1-201ENST00000323848 FOXA2Q9Y261 457 aaPredicted RBP11.09□□□□□ -0.63
SRRM1-201ENST00000323848 ADAMTS20P59510 1910 aa11.09□□□□□ -0.63
SRRM1-201ENST00000323848 CLEC3BP05452 202 aa11.09□□□□□ -0.63
SRRM1-201ENST00000323848 LINC00479Q96M42 142 aa11.09□□□□□ -0.63
SRRM1-201ENST00000323848 EFNB3Q15768 340 aa11.09□□□□□ -0.63
SRRM1-201ENST00000323848 C1orf229Q6ZS94 237 aaPredicted RBP11.09□□□□□ -0.63
SRRM1-201ENST00000323848 HIF1ANQ9NWT6 349 aa11.09□□□□□ -0.63
SRRM1-201ENST00000323848 WDR83OSQ9Y284 106 aa11.09□□□□□ -0.63
SRRM1-201ENST00000323848 AMMECR1Q9Y4X0 333 aaPredicted RBP11.09□□□□□ -0.63
SRRM1-201ENST00000323848 TGOLN2O43493 480 aa11.08□□□□□ -0.64
SRRM1-201ENST00000323848 GATCO43716 136 aaKnown RBP11.08□□□□□ -0.64
SRRM1-201ENST00000323848 OSR1Q8TAX0 266 aaPredicted RBP11.08□□□□□ -0.64
SRRM1-201ENST00000323848 NACAE9PAV3 2078 aa11.08□□□□□ -0.64
SRRM1-201ENST00000323848 TRGC1P0CF51 173 aa11.08□□□□□ -0.64
SRRM1-201ENST00000323848 PACRGQ96M98 296 aaPredicted RBP11.08□□□□□ -0.64
SRRM1-201ENST00000323848 PRRC2AP48634 2157 aaKnown RBP11.08□□□□□ -0.64
SRRM1-201ENST00000323848 COLCA2A8K830 154 aa11.08□□□□□ -0.64
SRRM1-201ENST00000323848 GPX4P36969 197 aaPredicted RBP11.08□□□□□ -0.64
SRRM1-201ENST00000323848 CD81P60033 236 aa11.08□□□□□ -0.64
SRRM1-201ENST00000323848 PNRC1Q12796 327 aaPredicted RBP11.08□□□□□ -0.64
SRRM1-201ENST00000323848 CDSNQ15517 529 aa11.08□□□□□ -0.64
SRRM1-201ENST00000323848 RITA1Q96K30 269 aa11.08□□□□□ -0.64
SRRM1-201ENST00000323848 RNASE7Q9H1E1 156 aaKnown RBP11.08□□□□□ -0.64
SRRM1-201ENST00000323848 DPM3Q9P2X0 92 aa11.08□□□□□ -0.64
SRRM1-201ENST00000323848 DDTP30046 118 aa11.07□□□□□ -0.64
SRRM1-201ENST00000323848 PRNTQ86SH4 94 aa11.07□□□□□ -0.64
SRRM1-201ENST00000323848 OR2D3Q8NGH3 330 aa11.07□□□□□ -0.64
SRRM1-201ENST00000323848 CBLN4Q9NTU7 201 aa11.07□□□□□ -0.64
SRRM1-201ENST00000323848 SNURFLB1AK76 121 aa11.07□□□□□ -0.64
SRRM1-201ENST00000323848 HYPMO75409 117 aa11.07□□□□□ -0.64
SRRM1-201ENST00000323848 IL4P05112 153 aa11.07□□□□□ -0.64
SRRM1-201ENST00000323848 CBLN1P23435 193 aa11.07□□□□□ -0.64
SRRM1-201ENST00000323848 LOXP28300 417 aaPredicted RBP11.07□□□□□ -0.64
SRRM1-201ENST00000323848 PAX5Q02548 391 aa11.07□□□□□ -0.64
SRRM1-201ENST00000323848 UNQ5815/PRO19632Q6UWF5 114 aa11.07□□□□□ -0.64
SRRM1-201ENST00000323848 SRSF12Q8WXF0 261 aaKnown RBP11.07□□□□□ -0.64
SRRM1-201ENST00000323848 SHISA9B4DS77 424 aa11.07□□□□□ -0.64
SRRM1-201ENST00000323848 H0YJW9 148 aa11.07□□□□□ -0.64
SRRM1-201ENST00000323848 KRTDAPP60985 99 aa11.07□□□□□ -0.64
SRRM1-201ENST00000323848 RPL23P62829 140 aaKnown RBP11.07□□□□□ -0.64
SRRM1-201ENST00000323848 SLC25A48Q6ZT89 311 aaKnown RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms