RNA–Protein interactions for RNA: ENST00000321027.7

GCFC2-201, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCFC2, Length 4,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-201ENST00000321027 TRAV1-1A0A0B4J248 108 aa12.81□□□□□ -0.36
GCFC2-201ENST00000321027 DUTP33316 252 aaKnown RBP12.81□□□□□ -0.36
GCFC2-201ENST00000321027 MORN2Q502X0 79 aa12.81□□□□□ -0.36
GCFC2-201ENST00000321027 CLEC2AQ6UVW9 174 aa12.81□□□□□ -0.36
GCFC2-201ENST00000321027 LINC01560Q8TB33 94 aa12.81□□□□□ -0.36
GCFC2-201ENST00000321027 METRNQ9UJH8 293 aa12.81□□□□□ -0.36
GCFC2-201ENST00000321027 SERF1AO75920 110 aa12.8□□□□□ -0.36
GCFC2-201ENST00000321027 ID1P41134 155 aa12.8□□□□□ -0.36
GCFC2-201ENST00000321027 C19orf24Q9BVV8 132 aa12.8□□□□□ -0.36
GCFC2-201ENST00000321027 PROK2Q9HC23 129 aa12.8□□□□□ -0.36
GCFC2-201ENST00000321027 PHLDA3Q9Y5J5 127 aa12.8□□□□□ -0.36
GCFC2-201ENST00000321027 KBTBD11-OT1A0A1B0GTJ5 212 aa12.8□□□□□ -0.36
GCFC2-201ENST00000321027 A0A1B0GW64 132 aa12.8□□□□□ -0.36
GCFC2-201ENST00000321027 CX3CL1P78423 397 aa12.8□□□□□ -0.36
GCFC2-201ENST00000321027 LY6EQ16553 131 aa12.8□□□□□ -0.36
GCFC2-201ENST00000321027 OR10AG1Q8NH19 301 aa12.8□□□□□ -0.36
GCFC2-201ENST00000321027 C14orf144Q96I85 54 aa12.8□□□□□ -0.36
GCFC2-201ENST00000321027 IGHV3OR16-10A0A075B7F0 116 aa12.8□□□□□ -0.36
GCFC2-201ENST00000321027 JOSD1Q15040 202 aaPredicted RBP12.8□□□□□ -0.36
GCFC2-201ENST00000321027 CHODLQ9H9P2 273 aa12.8□□□□□ -0.36
GCFC2-201ENST00000321027 TBL2Q9Y4P3 447 aaKnown RBP12.8□□□□□ -0.36
GCFC2-201ENST00000321027 ALPK3Q96L96 1907 aa12.8□□□□□ -0.36
GCFC2-201ENST00000321027 SAA2-SAA4A0A096LPE2 208 aa12.79□□□□□ -0.36
GCFC2-201ENST00000321027 DPRXA6NFQ7 191 aa12.79□□□□□ -0.36
GCFC2-201ENST00000321027 SAA2P0DJI9 122 aaPredicted RBP12.79□□□□□ -0.36
GCFC2-201ENST00000321027 PRB3Q04118 309 aaPredicted RBP12.79□□□□□ -0.36
GCFC2-201ENST00000321027 IFI27L2Q9H2X8 130 aa12.79□□□□□ -0.36
GCFC2-201ENST00000321027 RALYQ9UKM9 306 aaKnown RBP12.79□□□□□ -0.36
GCFC2-201ENST00000321027 RELQ04864 619 aaPredicted RBP12.79□□□□□ -0.36
GCFC2-201ENST00000321027 FAM90A2PQ658T7 463 aa12.79□□□□□ -0.36
GCFC2-201ENST00000321027 MDS2Q8NDY4 140 aa12.79□□□□□ -0.36
GCFC2-201ENST00000321027 MAP1LC3AQ9H492 121 aa12.79□□□□□ -0.36
GCFC2-201ENST00000321027 PCNX3Q9H6A9 2034 aa12.79□□□□□ -0.36
GCFC2-201ENST00000321027 LIPFP07098 398 aa12.79□□□□□ -0.36
GCFC2-201ENST00000321027 CCL3L1P16619 93 aa12.79□□□□□ -0.36
GCFC2-201ENST00000321027 TMEM14EPQ6UXP3 125 aa12.79□□□□□ -0.36
GCFC2-201ENST00000321027 FAM57AQ8TBR7 257 aa12.79□□□□□ -0.36
GCFC2-201ENST00000321027 FOXI3A8MTJ6 420 aaPredicted RBP12.78□□□□□ -0.36
GCFC2-201ENST00000321027 NUDT3O95989 172 aa12.78□□□□□ -0.36
GCFC2-201ENST00000321027 SRSF7Q16629 238 aaKnown RBP eCLIP12.78□□□□□ -0.36
GCFC2-201ENST00000321027 TCF24Q7RTU0 167 aa12.78□□□□□ -0.36
GCFC2-201ENST00000321027 IGHV3OR16-12A0A075B7B8 117 aa12.78□□□□□ -0.36
GCFC2-201ENST00000321027 CD33P20138 364 aa12.78□□□□□ -0.36
GCFC2-201ENST00000321027 ADMP35318 185 aa12.78□□□□□ -0.36
GCFC2-201ENST00000321027 GPX4P36969 197 aaPredicted RBP12.78□□□□□ -0.36
GCFC2-201ENST00000321027 IL15RAQ13261 267 aa12.78□□□□□ -0.36
GCFC2-201ENST00000321027 EBLN2Q6P2I7 272 aa12.78□□□□□ -0.36
GCFC2-201ENST00000321027 NDUFS6O75380 124 aaKnown RBP12.78□□□□□ -0.36
GCFC2-201ENST00000321027 PET117Q6UWS5 81 aa12.78□□□□□ -0.36
GCFC2-201ENST00000321027 C18orf15Q96N68 181 aa12.78□□□□□ -0.36
GCFC2-201ENST00000321027 MRPL32Q9BYC8 188 aaKnown RBP12.78□□□□□ -0.36
GCFC2-201ENST00000321027 TMEM242Q9NWH2 141 aa12.78□□□□□ -0.36
GCFC2-201ENST00000321027 BPTFQ12830 3046 aa12.78□□□□□ -0.36
GCFC2-201ENST00000321027 C7orf71A4D174 169 aa12.78□□□□□ -0.36
GCFC2-201ENST00000321027 RBFOX2O43251 390 aaKnown RBP eCLIP12.78□□□□□ -0.36
GCFC2-201ENST00000321027 TREML4Q6UXN2 200 aa12.78□□□□□ -0.36
GCFC2-201ENST00000321027 OSR1Q8TAX0 266 aaPredicted RBP12.78□□□□□ -0.36
GCFC2-201ENST00000321027 IGKV3-20P01619 116 aa12.77□□□□□ -0.36
GCFC2-201ENST00000321027 ZNF585BQ52M93 769 aa12.77□□□□□ -0.36
GCFC2-201ENST00000321027 FAM53AQ6NSI3 398 aaPredicted RBP12.77□□□□□ -0.36
GCFC2-201ENST00000321027 Q6P435 159 aa12.77□□□□□ -0.36
GCFC2-201ENST00000321027 NDUFAF3Q9BU61 184 aa12.77□□□□□ -0.36
GCFC2-201ENST00000321027 LOC105371242A0A075B767 164 aa12.77□□□□□ -0.37
GCFC2-201ENST00000321027 LINC00473A8K010 186 aa12.77□□□□□ -0.37
GCFC2-201ENST00000321027 NPIPB11E5RHQ5 1161 aa12.77□□□□□ -0.37
GCFC2-201ENST00000321027 SNAI2O43623 268 aa12.77□□□□□ -0.37
GCFC2-201ENST00000321027 FABP2P12104 132 aa12.77□□□□□ -0.37
GCFC2-201ENST00000321027 PLP1P60201 277 aa12.77□□□□□ -0.37
GCFC2-201ENST00000321027 HBBP68871 147 aa12.77□□□□□ -0.37
GCFC2-201ENST00000321027 EFNB3Q15768 340 aa12.77□□□□□ -0.37
GCFC2-201ENST00000321027 FAM74A4Q5TZK3 123 aa12.77□□□□□ -0.37
GCFC2-201ENST00000321027 MRPL20Q9BYC9 149 aaKnown RBP12.77□□□□□ -0.37
GCFC2-201ENST00000321027 PARD6GQ9BYG4 376 aaPredicted RBP12.77□□□□□ -0.37
GCFC2-201ENST00000321027 TMEM106BQ9NUM4 274 aa12.77□□□□□ -0.37
GCFC2-201ENST00000321027 CRIM1Q9NZV1 1036 aa12.77□□□□□ -0.37
GCFC2-201ENST00000321027 HIST1H4GQ99525 98 aa12.77□□□□□ -0.37
GCFC2-201ENST00000321027 OBSL1O75147 1896 aa12.77□□□□□ -0.37
GCFC2-201ENST00000321027 TRAV3A0A0B4J244 114 aa12.76□□□□□ -0.37
GCFC2-201ENST00000321027 IGHV3-23P01764 117 aa12.76□□□□□ -0.37
GCFC2-201ENST00000321027 C10orf91Q5T1B1 145 aa12.76□□□□□ -0.37
GCFC2-201ENST00000321027 PCDH15Q96QU1 1955 aa12.76□□□□□ -0.37
GCFC2-201ENST00000321027 A0A1W2PS18 150 aa12.76□□□□□ -0.37
GCFC2-201ENST00000321027 YPEL1O60688 119 aa12.76□□□□□ -0.37
GCFC2-201ENST00000321027 TEX38Q6PEX7 206 aa12.76□□□□□ -0.37
GCFC2-201ENST00000321027 ST6GALNAC6Q969X2 333 aa12.76□□□□□ -0.37
GCFC2-201ENST00000321027 YPEL2Q96QA6 119 aa12.76□□□□□ -0.37
GCFC2-201ENST00000321027 ZGRF1Q86YA3 2104 aa12.76□□□□□ -0.37
GCFC2-201ENST00000321027 TRAV30A0A087WSZ9 112 aa12.76□□□□□ -0.37
GCFC2-201ENST00000321027 CA1P00915 261 aaPredicted RBP12.76□□□□□ -0.37
GCFC2-201ENST00000321027 PAX9P55771 341 aa12.76□□□□□ -0.37
GCFC2-201ENST00000321027 TAS2R60P59551 318 aa12.76□□□□□ -0.37
GCFC2-201ENST00000321027 SPATA31B1PQ5VZV4 182 aa12.76□□□□□ -0.37
GCFC2-201ENST00000321027 LINC01551Q86U37 167 aa12.76□□□□□ -0.37
GCFC2-201ENST00000321027 MIEN1Q9BRT3 115 aa12.76□□□□□ -0.37
GCFC2-201ENST00000321027 YLPM1P49750 1951 aaKnown RBP12.76□□□□□ -0.37
GCFC2-201ENST00000321027 STAG3L2P0CL84 134 aa12.76□□□□□ -0.37
GCFC2-201ENST00000321027 TMEM136Q6ZRR5 245 aa12.76□□□□□ -0.37
GCFC2-201ENST00000321027 TMEM144Q7Z5S9 345 aa12.76□□□□□ -0.37
GCFC2-201ENST00000321027 GGTLC1Q9BX51 225 aa12.76□□□□□ -0.37
GCFC2-201ENST00000321027 GPX1P07203 203 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms