RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 S100GP29377 79 aa10.66□□□□□ -0.7
CPNE1-201ENST00000317677 S100A7P31151 101 aa10.66□□□□□ -0.7
CPNE1-201ENST00000317677 ZNF672Q499Z4 452 aaPredicted RBP10.66□□□□□ -0.7
CPNE1-201ENST00000317677 LYPD2Q6UXB3 125 aa10.66□□□□□ -0.7
CPNE1-201ENST00000317677 C19orf35Q6ZS72 473 aa10.66□□□□□ -0.7
CPNE1-201ENST00000317677 ZNF295-AS1Q8N0V1 137 aa10.66□□□□□ -0.7
CPNE1-201ENST00000317677 RPP25LQ8N5L8 163 aaKnown RBP10.66□□□□□ -0.7
CPNE1-201ENST00000317677 OR4F5Q8NH21 305 aa10.66□□□□□ -0.7
CPNE1-201ENST00000317677 CCL17Q92583 94 aa10.66□□□□□ -0.7
CPNE1-201ENST00000317677 NINJ1Q92982 152 aa10.66□□□□□ -0.7
CPNE1-201ENST00000317677 LEAP2Q969E1 77 aa10.66□□□□□ -0.7
CPNE1-201ENST00000317677 FAM234AQ9H0X4 552 aa10.66□□□□□ -0.7
CPNE1-201ENST00000317677 LIN7CQ9NUP9 197 aaKnown RBP10.66□□□□□ -0.7
CPNE1-201ENST00000317677 RNF24Q9Y225 148 aa10.66□□□□□ -0.7
CPNE1-201ENST00000317677 CTXND1A0A1B0GTU2 59 aa10.66□□□□□ -0.7
CPNE1-201ENST00000317677 C17orf98A8MV24 154 aa10.66□□□□□ -0.7
CPNE1-201ENST00000317677 VSTM5A8MXK1 200 aa10.66□□□□□ -0.7
CPNE1-201ENST00000317677 SERPINE2P07093 398 aa10.66□□□□□ -0.7
CPNE1-201ENST00000317677 OR10J3Q5JRS4 329 aa10.66□□□□□ -0.7
CPNE1-201ENST00000317677 ZBTB34Q8NCN2 500 aa10.66□□□□□ -0.7
CPNE1-201ENST00000317677 WDR61Q9GZS3 305 aaKnown RBP10.66□□□□□ -0.7
CPNE1-201ENST00000317677 IFI27L2Q9H2X8 130 aa10.66□□□□□ -0.7
CPNE1-201ENST00000317677 RNF114Q9Y508 228 aa10.66□□□□□ -0.7
CPNE1-201ENST00000317677 DCHS2Q6V1P9 2916 aa10.65□□□□□ -0.7
CPNE1-201ENST00000317677 CENPEQ02224 2701 aa10.65□□□□□ -0.7
CPNE1-201ENST00000317677 PPIAL4EA0A075B759 164 aa10.65□□□□□ -0.7
CPNE1-201ENST00000317677 A6NJY4 79 aa10.65□□□□□ -0.7
CPNE1-201ENST00000317677 LRRC30A6NM36 301 aa10.65□□□□□ -0.7
CPNE1-201ENST00000317677 C17orf112F2Z3M2 114 aa10.65□□□□□ -0.7
CPNE1-201ENST00000317677 PPIAL4DF5H284 164 aa10.65□□□□□ -0.7
CPNE1-201ENST00000317677 PDE6DO43924 150 aa10.65□□□□□ -0.7
CPNE1-201ENST00000317677 PPIAL4FP0DN26 164 aa10.65□□□□□ -0.7
CPNE1-201ENST00000317677 PSG1P11464 419 aa10.65□□□□□ -0.7
CPNE1-201ENST00000317677 HBG1P69891 147 aa10.65□□□□□ -0.7
CPNE1-201ENST00000317677 HBG2P69892 147 aa10.65□□□□□ -0.7
CPNE1-201ENST00000317677 OR4P4Q8NGL7 312 aa10.65□□□□□ -0.7
CPNE1-201ENST00000317677 MRPL18Q9H0U6 180 aaKnown RBP10.65□□□□□ -0.7
CPNE1-201ENST00000317677 MS4A5Q9H3V2 200 aa10.65□□□□□ -0.7
CPNE1-201ENST00000317677 GNG12Q9UBI6 72 aa10.65□□□□□ -0.7
CPNE1-201ENST00000317677 CTSZQ9UBR2 303 aa10.65□□□□□ -0.7
CPNE1-201ENST00000317677 TRAV38-1A0A0B4J264 116 aa10.65□□□□□ -0.71
CPNE1-201ENST00000317677 KBTBD11-OT1A0A1B0GTJ5 212 aa10.65□□□□□ -0.71
CPNE1-201ENST00000317677 TAX1BP3O14907 124 aa10.65□□□□□ -0.71
CPNE1-201ENST00000317677 CLDN14O95500 239 aa10.65□□□□□ -0.71
CPNE1-201ENST00000317677 P0C879 139 aa10.65□□□□□ -0.71
CPNE1-201ENST00000317677 SCGB1A1P11684 91 aa10.65□□□□□ -0.71
CPNE1-201ENST00000317677 TMEM249Q2WGJ8 235 aa10.65□□□□□ -0.71
CPNE1-201ENST00000317677 LSM10Q969L4 123 aaKnown RBP10.65□□□□□ -0.71
CPNE1-201ENST00000317677 SFRP2Q96HF1 295 aa10.65□□□□□ -0.71
CPNE1-201ENST00000317677 UNC79Q9P2D8 2635 aa10.65□□□□□ -0.71
CPNE1-201ENST00000317677 TBL2Q9Y4P3 447 aaKnown RBP10.65□□□□□ -0.71
CPNE1-201ENST00000317677 LRBAP50851 2863 aa10.64□□□□□ -0.71
CPNE1-201ENST00000317677 NBPF19A0A087WUL8 3843 aa10.64□□□□□ -0.71
CPNE1-201ENST00000317677 ABCA4P78363 2273 aa10.64□□□□□ -0.71
CPNE1-201ENST00000317677 LYNX1G3V0Z9 82 aa10.64□□□□□ -0.71
CPNE1-201ENST00000317677 LYNX1P0DP58 116 aa10.64□□□□□ -0.71
CPNE1-201ENST00000317677 NPPCP23582 126 aa10.64□□□□□ -0.71
CPNE1-201ENST00000317677 ZNF439Q8NDP4 499 aa10.64□□□□□ -0.71
CPNE1-201ENST00000317677 LINC00574Q9H8X3 128 aa10.64□□□□□ -0.71
CPNE1-201ENST00000317677 NOTCH2Q04721 2471 aa10.64□□□□□ -0.71
CPNE1-201ENST00000317677 TRAV9-2A0A087WT02 112 aa10.63□□□□□ -0.71
CPNE1-201ENST00000317677 A0A1W2PPR1 153 aa10.63□□□□□ -0.71
CPNE1-201ENST00000317677 GAGE12BA1L429 117 aa10.63□□□□□ -0.71
CPNE1-201ENST00000317677 ZG16O60844 167 aa10.63□□□□□ -0.71
CPNE1-201ENST00000317677 S1PR2O95136 353 aa10.63□□□□□ -0.71
CPNE1-201ENST00000317677 CLDN1O95832 211 aa10.63□□□□□ -0.71
CPNE1-201ENST00000317677 RHOBP62745 196 aa10.63□□□□□ -0.71
CPNE1-201ENST00000317677 ZNF816Q0VGE8 651 aaPredicted RBP10.63□□□□□ -0.71
CPNE1-201ENST00000317677 RPL39P5Q59GN2 51 aa10.63□□□□□ -0.71
CPNE1-201ENST00000317677 CT45A1Q5HYN5 189 aa10.63□□□□□ -0.71
CPNE1-201ENST00000317677 DEFB125Q8N687 156 aa10.63□□□□□ -0.71
CPNE1-201ENST00000317677 CT45A3Q8NHU0 189 aa10.63□□□□□ -0.71
CPNE1-201ENST00000317677 ITLN2Q8WWU7 325 aaPredicted RBP10.63□□□□□ -0.71
CPNE1-201ENST00000317677 TAF15Q92804 592 aaKnown RBP eCLIP10.63□□□□□ -0.717e-7■□□□□ 11
CPNE1-201ENST00000317677 GNB1LQ9BYB4 327 aa10.63□□□□□ -0.71
CPNE1-201ENST00000317677 MEGF9Q9H1U4 602 aa10.63□□□□□ -0.71
CPNE1-201ENST00000317677 SLC25A10Q9UBX3 287 aaPredicted RBP10.63□□□□□ -0.71
CPNE1-201ENST00000317677 CACNG5Q9UF02 275 aa10.63□□□□□ -0.71
CPNE1-201ENST00000317677 SMPXQ9UHP9 88 aa10.63□□□□□ -0.71
CPNE1-201ENST00000317677 TRGV10A0A0A0MS01 117 aa10.63□□□□□ -0.71
CPNE1-201ENST00000317677 C3orf79P0CE67 100 aa10.63□□□□□ -0.71
CPNE1-201ENST00000317677 COL8A2P25067 703 aa10.63□□□□□ -0.71
CPNE1-201ENST00000317677 DUTP33316 252 aaKnown RBP10.63□□□□□ -0.71
CPNE1-201ENST00000317677 PSG3Q16557 428 aa10.63□□□□□ -0.71
CPNE1-201ENST00000317677 HLA-DRB5Q30154 266 aa10.63□□□□□ -0.71
CPNE1-201ENST00000317677 PRAMEF5Q5TYX0 476 aa10.63□□□□□ -0.71
CPNE1-201ENST00000317677 OR4A47Q6IF82 309 aa10.63□□□□□ -0.71
CPNE1-201ENST00000317677 A0A1W2PS18 150 aa10.62□□□□□ -0.71
CPNE1-201ENST00000317677 CYSRT1A8MQ03 144 aa10.62□□□□□ -0.71
CPNE1-201ENST00000317677 G3V4G9 280 aa10.62□□□□□ -0.71
CPNE1-201ENST00000317677 IGKV1D-33P01593 117 aa10.62□□□□□ -0.71
CPNE1-201ENST00000317677 IGKV1-33P01594 117 aa10.62□□□□□ -0.71
CPNE1-201ENST00000317677 PAX2Q02962 417 aa10.62□□□□□ -0.71
CPNE1-201ENST00000317677 COX19Q49B96 90 aa10.62□□□□□ -0.71
CPNE1-201ENST00000317677 ZNF596Q8TC21 504 aa10.62□□□□□ -0.71
CPNE1-201ENST00000317677 KCNS1Q96KK3 526 aa10.62□□□□□ -0.71
CPNE1-201ENST00000317677 TXNDC17Q9BRA2 123 aa10.62□□□□□ -0.71
CPNE1-201ENST00000317677 IDI2-AS1Q9NZ38 188 aa10.62□□□□□ -0.71
CPNE1-201ENST00000317677 IL36BQ9NZH7 164 aa10.62□□□□□ -0.71
CPNE1-201ENST00000317677 TRAV34A0A0B4J273 112 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms