RNA–Protein interactions for RNA: ENST00000317201.6

HOXA3-201, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXA3, Length 2,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-201ENST00000317201 CITED1Q99966 193 aa12.07□□□□□ -0.48
HOXA3-201ENST00000317201 PRR14LQ5THK1 2151 aa12.07□□□□□ -0.48
HOXA3-201ENST00000317201 MDFIC2A0A1B0GVS7 189 aa12.07□□□□□ -0.48
HOXA3-201ENST00000317201 SHISA9B4DS77 424 aa12.07□□□□□ -0.48
HOXA3-201ENST00000317201 SRIP30626 198 aa12.07□□□□□ -0.48
HOXA3-201ENST00000317201 GCSAMQ8N6F7 178 aa12.07□□□□□ -0.48
HOXA3-201ENST00000317201 OR5D13Q8NGL4 314 aa12.07□□□□□ -0.48
HOXA3-201ENST00000317201 TSKUQ8WUA8 353 aa12.07□□□□□ -0.48
HOXA3-201ENST00000317201 ITLN1Q8WWA0 313 aa12.07□□□□□ -0.48
HOXA3-201ENST00000317201 TRBV7-9A0A0J9YWB2 115 aa12.07□□□□□ -0.48
HOXA3-201ENST00000317201 IGHV3-64DA0A0J9YX35 117 aa12.07□□□□□ -0.48
HOXA3-201ENST00000317201 H0YJW9 148 aa12.07□□□□□ -0.48
HOXA3-201ENST00000317201 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.07□□□□□ -0.48
HOXA3-201ENST00000317201 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.07□□□□□ -0.48
HOXA3-201ENST00000317201 ID1P41134 155 aa12.07□□□□□ -0.48
HOXA3-201ENST00000317201 C12orf54Q6X4T0 127 aa12.07□□□□□ -0.48
HOXA3-201ENST00000317201 CCDC71LQ8N9Z2 235 aa12.07□□□□□ -0.48
HOXA3-201ENST00000317201 NEIL1Q96FI4 390 aaPredicted RBP12.07□□□□□ -0.48
HOXA3-201ENST00000317201 MCRIP2Q9BUT9 160 aaKnown RBP12.07□□□□□ -0.48
HOXA3-201ENST00000317201 IGKV1-6A0A0C4DH72 117 aa12.06□□□□□ -0.48
HOXA3-201ENST00000317201 PSPNO60542 156 aa12.06□□□□□ -0.48
HOXA3-201ENST00000317201 TNFRSF1AP19438 455 aa12.06□□□□□ -0.48
HOXA3-201ENST00000317201 EFNB3Q15768 340 aa12.06□□□□□ -0.48
HOXA3-201ENST00000317201 MOGAT3Q86VF5 341 aa12.06□□□□□ -0.48
HOXA3-201ENST00000317201 ZNF695Q8IW36 515 aa12.06□□□□□ -0.48
HOXA3-201ENST00000317201 QTRT1Q9BXR0 403 aaKnown RBP12.06□□□□□ -0.48
HOXA3-201ENST00000317201 GCM1Q9NP62 436 aa12.06□□□□□ -0.48
HOXA3-201ENST00000317201 RNF7Q9UBF6 113 aa12.06□□□□□ -0.48
HOXA3-201ENST00000317201 TRAPPC2LQ9UL33 140 aa12.06□□□□□ -0.48
HOXA3-201ENST00000317201 PSG8Q9UQ74 426 aa12.06□□□□□ -0.48
HOXA3-201ENST00000317201 UBE2J1Q9Y385 318 aaPredicted RBP12.06□□□□□ -0.48
HOXA3-201ENST00000317201 HILPDAQ9Y5L2 63 aa12.06□□□□□ -0.48
HOXA3-201ENST00000317201 FAM90A27PA6NNH2 459 aa12.06□□□□□ -0.48
HOXA3-201ENST00000317201 C17orf100A8MU93 164 aa12.06□□□□□ -0.48
HOXA3-201ENST00000317201 APOA2P02652 100 aa12.06□□□□□ -0.48
HOXA3-201ENST00000317201 CD3EP07766 207 aa12.06□□□□□ -0.48
HOXA3-201ENST00000317201 SLC25A6P12236 298 aa12.06□□□□□ -0.48
HOXA3-201ENST00000317201 IGFBP2P18065 325 aa12.06□□□□□ -0.48
HOXA3-201ENST00000317201 VDAC1P21796 283 aa12.06□□□□□ -0.48
HOXA3-201ENST00000317201 USF1P22415 310 aaPredicted RBP12.06□□□□□ -0.48
HOXA3-201ENST00000317201 PRDX2P32119 198 aa12.06□□□□□ -0.48
HOXA3-201ENST00000317201 ARL16Q0P5N6 197 aa12.06□□□□□ -0.48
HOXA3-201ENST00000317201 TMEM249Q2WGJ8 235 aa12.06□□□□□ -0.48
HOXA3-201ENST00000317201 TRAT1Q6PIZ9 186 aa12.06□□□□□ -0.48
HOXA3-201ENST00000317201 PPP1R35Q8TAP8 253 aa12.06□□□□□ -0.48
HOXA3-201ENST00000317201 MRAP2Q96G30 205 aa12.06□□□□□ -0.48
HOXA3-201ENST00000317201 SERTAD4Q9NUC0 356 aa12.06□□□□□ -0.48
HOXA3-201ENST00000317201 C3orf80F5H4A9 247 aa12.05□□□□□ -0.48
HOXA3-201ENST00000317201 IAPPP10997 89 aa12.05□□□□□ -0.48
HOXA3-201ENST00000317201 PSG2P11465 335 aa12.05□□□□□ -0.48
HOXA3-201ENST00000317201 PAX9P55771 341 aa12.05□□□□□ -0.48
HOXA3-201ENST00000317201 CD300EQ496F6 205 aaPredicted RBP12.05□□□□□ -0.48
HOXA3-201ENST00000317201 SMIM20Q8N5G0 67 aa12.05□□□□□ -0.48
HOXA3-201ENST00000317201 PLPPR2Q96GM1 343 aa12.05□□□□□ -0.48
HOXA3-201ENST00000317201 POLEQ07864 2286 aa12.05□□□□□ -0.48
HOXA3-201ENST00000317201 NCOR2Q9Y618 2525 aa12.05□□□□□ -0.48
HOXA3-201ENST00000317201 C11orf94C9JXX5 98 aa12.05□□□□□ -0.48
HOXA3-201ENST00000317201 CRYGCP07315 174 aa12.05□□□□□ -0.48
HOXA3-201ENST00000317201 SLC25A34Q6PIV7 304 aa12.05□□□□□ -0.48
HOXA3-201ENST00000317201 LRTM2Q8N967 370 aa12.05□□□□□ -0.48
HOXA3-201ENST00000317201 OR2K2Q8NGT1 345 aa12.05□□□□□ -0.48
HOXA3-201ENST00000317201 NEU4Q8WWR8 484 aaPredicted RBP12.05□□□□□ -0.48
HOXA3-201ENST00000317201 KCNIP1Q9NZI2 227 aa12.05□□□□□ -0.48
HOXA3-201ENST00000317201 OOEPA6NGQ2 149 aa12.04□□□□□ -0.48
HOXA3-201ENST00000317201 GNB1P62873 340 aa12.04□□□□□ -0.48
HOXA3-201ENST00000317201 ATP5G2Q06055 141 aa12.04□□□□□ -0.48
HOXA3-201ENST00000317201 ZNF808Q8N4W9 903 aaPredicted RBP12.04□□□□□ -0.48
HOXA3-201ENST00000317201 CD177Q8N6Q3 437 aa12.04□□□□□ -0.48
HOXA3-201ENST00000317201 NINJ1Q92982 152 aa12.04□□□□□ -0.48
HOXA3-201ENST00000317201 RNF183Q96D59 192 aa12.04□□□□□ -0.48
HOXA3-201ENST00000317201 IGKV1D-17A0A075B6S4 117 aa12.04□□□□□ -0.48
HOXA3-201ENST00000317201 K7EP34 96 aa12.04□□□□□ -0.48
HOXA3-201ENST00000317201 VENTXO95231 258 aa12.04□□□□□ -0.48
HOXA3-201ENST00000317201 STAG3L2P0CL84 134 aa12.04□□□□□ -0.48
HOXA3-201ENST00000317201 CD1BP29016 333 aa12.04□□□□□ -0.48
HOXA3-201ENST00000317201 ATP5G3P48201 142 aa12.04□□□□□ -0.48
HOXA3-201ENST00000317201 OR2W1Q9Y3N9 320 aa12.04□□□□□ -0.48
HOXA3-201ENST00000317201 TFF3Q07654 80 aa12.03□□□□□ -0.48
HOXA3-201ENST00000317201 SPRNQ5BIV9 151 aa12.03□□□□□ -0.48
HOXA3-201ENST00000317201 TEX36Q5VZQ5 186 aa12.03□□□□□ -0.48
HOXA3-201ENST00000317201 OR10G8Q8NGN5 311 aa12.03□□□□□ -0.48
HOXA3-201ENST00000317201 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.03□□□□□ -0.48
HOXA3-201ENST00000317201 E7EQL1 145 aa12.03□□□□□ -0.48
HOXA3-201ENST00000317201 H0Y8G0 127 aa12.03□□□□□ -0.48
HOXA3-201ENST00000317201 F2RL2O00254 374 aa12.03□□□□□ -0.48
HOXA3-201ENST00000317201 CR1LQ2VPA4 569 aa12.03□□□□□ -0.48
HOXA3-201ENST00000317201 RP1L1Q8IWN7 2480 aaPredicted RBP12.03□□□□□ -0.48
HOXA3-201ENST00000317201 COQ2Q96H96 371 aa12.03□□□□□ -0.48
HOXA3-201ENST00000317201 SSBP4Q9BWG4 385 aaPredicted RBP12.03□□□□□ -0.48
HOXA3-201ENST00000317201 C3orf85A0A1B0GTC6 90 aa12.02□□□□□ -0.48
HOXA3-201ENST00000317201 UBE2L5PA0A1B0GUS4 154 aa12.02□□□□□ -0.48
HOXA3-201ENST00000317201 OR4C46A6NHA9 309 aa12.02□□□□□ -0.48
HOXA3-201ENST00000317201 B9A039 149 aa12.02□□□□□ -0.48
HOXA3-201ENST00000317201 J3QR06 171 aa12.02□□□□□ -0.48
HOXA3-201ENST00000317201 MGST3O14880 152 aa12.02□□□□□ -0.48
HOXA3-201ENST00000317201 TSPAN13O95857 204 aa12.02□□□□□ -0.48
HOXA3-201ENST00000317201 TCL1AP56279 114 aa12.02□□□□□ -0.48
HOXA3-201ENST00000317201 MS4A5Q9H3V2 200 aa12.02□□□□□ -0.48
HOXA3-201ENST00000317201 ZZEF1O43149 2961 aa12.02□□□□□ -0.49
HOXA3-201ENST00000317201 TRBV20OR9-2A0A075B6H5 130 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms