RNA–Protein interactions for RNA: ENST00000316105.6

PCDHB9-201, Transcript of protocadherin beta 9, humanhuman

APPRIS P1 BASIC

Gene PCDHB9, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-201ENST00000316105 FAM90A2PQ658T7 463 aa11.03□□□□□ -0.64
PCDHB9-201ENST00000316105 LEMD1Q68G75 181 aa11.03□□□□□ -0.64
PCDHB9-201ENST00000316105 NUP37Q8NFH4 326 aa11.03□□□□□ -0.64
PCDHB9-201ENST00000316105 SSBP3Q9BWW4 388 aaPredicted RBP11.03□□□□□ -0.64
PCDHB9-201ENST00000316105 PLA2G2EQ9NZK7 142 aa11.03□□□□□ -0.64
PCDHB9-201ENST00000316105 NAGKQ9UJ70 344 aa11.03□□□□□ -0.64
PCDHB9-201ENST00000316105 PIEZO2Q9H5I5 2752 aa11.03□□□□□ -0.64
PCDHB9-201ENST00000316105 K7ERU9 68 aa11.02□□□□□ -0.64
PCDHB9-201ENST00000316105 HAPLN4Q86UW8 402 aa11.02□□□□□ -0.64
PCDHB9-201ENST00000316105 NDUFAF3Q9BU61 184 aa11.02□□□□□ -0.64
PCDHB9-201ENST00000316105 SFTPCP11686 197 aa11.02□□□□□ -0.65
PCDHB9-201ENST00000316105 ZNF137PP52743 207 aa11.02□□□□□ -0.65
PCDHB9-201ENST00000316105 LCN2P80188 198 aa11.02□□□□□ -0.65
PCDHB9-201ENST00000316105 PRR30Q53SZ7 412 aaPredicted RBP11.02□□□□□ -0.65
PCDHB9-201ENST00000316105 J3QR89 54 aa11.02□□□□□ -0.65
PCDHB9-201ENST00000316105 IGKV1-16P04430 117 aa11.02□□□□□ -0.65
PCDHB9-201ENST00000316105 SPATA31B1PQ5VZV4 182 aa11.02□□□□□ -0.65
PCDHB9-201ENST00000316105 TMEM183AQ8IXX5 376 aa11.02□□□□□ -0.65
PCDHB9-201ENST00000316105 ATG2AQ2TAZ0 1938 aa11.02□□□□□ -0.65
PCDHB9-201ENST00000316105 MT-ND6P03923 174 aa11.02□□□□□ -0.65
PCDHB9-201ENST00000316105 CSN3P07498 182 aa11.02□□□□□ -0.65
PCDHB9-201ENST00000316105 STAG3L2P0CL84 134 aa11.02□□□□□ -0.65
PCDHB9-201ENST00000316105 STAG3L3P0CL85 134 aa11.02□□□□□ -0.65
PCDHB9-201ENST00000316105 NEUROG1Q92886 237 aa11.02□□□□□ -0.65
PCDHB9-201ENST00000316105 SEPSECSQ9HD40 501 aaKnown RBP11.02□□□□□ -0.65
PCDHB9-201ENST00000316105 C15orf65H3BRN8 121 aa11.01□□□□□ -0.65
PCDHB9-201ENST00000316105 IGFL2Q6UWQ7 119 aa11.01□□□□□ -0.65
PCDHB9-201ENST00000316105 Q6ZPA2 131 aa11.01□□□□□ -0.65
PCDHB9-201ENST00000316105 ZNF738Q8NE65 137 aa11.01□□□□□ -0.65
PCDHB9-201ENST00000316105 RNASEH2CQ8TDP1 164 aaKnown RBP11.01□□□□□ -0.65
PCDHB9-201ENST00000316105 PARD6GQ9BYG4 376 aaPredicted RBP11.01□□□□□ -0.65
PCDHB9-201ENST00000316105 ZNF257Q9Y2Q1 563 aa11.01□□□□□ -0.65
PCDHB9-201ENST00000316105 DERL1Q9BUN8 251 aa11.01□□□□□ -0.65
PCDHB9-201ENST00000316105 DPM3Q9P2X0 92 aa11.01□□□□□ -0.65
PCDHB9-201ENST00000316105 DKK4Q9UBT3 224 aa11.01□□□□□ -0.65
PCDHB9-201ENST00000316105 COMPP49747 757 aaPredicted RBP11.01□□□□□ -0.65
PCDHB9-201ENST00000316105 PYY3Q5JQD4 70 aa11.01□□□□□ -0.65
PCDHB9-201ENST00000316105 BPIFA4PQ86YQ2 179 aa11.01□□□□□ -0.65
PCDHB9-201ENST00000316105 HSPB9Q9BQS6 159 aa11.01□□□□□ -0.65
PCDHB9-201ENST00000316105 K7EM74 188 aa11□□□□□ -0.65
PCDHB9-201ENST00000316105 ZNF726P1Q15940 193 aa11□□□□□ -0.65
PCDHB9-201ENST00000316105 FA2HQ7L5A8 372 aa11□□□□□ -0.65
PCDHB9-201ENST00000316105 S4R3C0 116 aa11□□□□□ -0.65
PCDHB9-201ENST00000316105 A8MWL6 223 aa11□□□□□ -0.65
PCDHB9-201ENST00000316105 ISLRO14498 428 aa11□□□□□ -0.65
PCDHB9-201ENST00000316105 FCGR2BP31994 310 aaPredicted RBP11□□□□□ -0.65
PCDHB9-201ENST00000316105 CEACAM8P31997 349 aaPredicted RBP11□□□□□ -0.65
PCDHB9-201ENST00000316105 LYPD2Q6UXB3 125 aa11□□□□□ -0.65
PCDHB9-201ENST00000316105 SLC25A48Q6ZT89 311 aaKnown RBP11□□□□□ -0.65
PCDHB9-201ENST00000316105 OR4A5Q8NH83 315 aa11□□□□□ -0.65
PCDHB9-201ENST00000316105 C14orf144Q96I85 54 aa11□□□□□ -0.65
PCDHB9-201ENST00000316105 IMMP2LQ96T52 175 aa11□□□□□ -0.65
PCDHB9-201ENST00000316105 TMEM242Q9NWH2 141 aa11□□□□□ -0.65
PCDHB9-201ENST00000316105 ANKHD1Q8IWZ3 2542 aaKnown RBP11□□□□□ -0.65
PCDHB9-201ENST00000316105 TMSB15BA0A087X1C1 80 aa11□□□□□ -0.65
PCDHB9-201ENST00000316105 M0R2Z0 102 aa11□□□□□ -0.65
PCDHB9-201ENST00000316105 OCC1Q8TAD7 63 aa11□□□□□ -0.65
PCDHB9-201ENST00000316105 ZNF134P52741 427 aa11□□□□□ -0.65
PCDHB9-201ENST00000316105 TRANK1O15050 2925 aa10.99□□□□□ -0.65
PCDHB9-201ENST00000316105 TRBV24-1A0A075B6N3 115 aa10.99□□□□□ -0.65
PCDHB9-201ENST00000316105 IGHV2-70P01814 119 aa10.99□□□□□ -0.65
PCDHB9-201ENST00000316105 HLA-DQA1P01909 254 aa10.99□□□□□ -0.65
PCDHB9-201ENST00000316105 NBEAP1P0C6P0 100 aa10.99□□□□□ -0.65
PCDHB9-201ENST00000316105 GBGT1Q8N5D6 347 aa10.99□□□□□ -0.65
PCDHB9-201ENST00000316105 LYPD6BQ8NI32 183 aa10.99□□□□□ -0.65
PCDHB9-201ENST00000316105 IL36BQ9NZH7 164 aa10.99□□□□□ -0.65
PCDHB9-201ENST00000316105 IGKV1D-33P01593 117 aa10.99□□□□□ -0.65
PCDHB9-201ENST00000316105 IGKV1-33P01594 117 aa10.99□□□□□ -0.65
PCDHB9-201ENST00000316105 GATA4P43694 442 aa10.99□□□□□ -0.65
PCDHB9-201ENST00000316105 SONP18583 2426 aaKnown RBP10.99□□□□□ -0.65
PCDHB9-201ENST00000316105 PYYP10082 97 aa10.99□□□□□ -0.65
PCDHB9-201ENST00000316105 CFHR2P36980 270 aa10.99□□□□□ -0.65
PCDHB9-201ENST00000316105 SLC25A33Q9BSK2 321 aa10.99□□□□□ -0.65
PCDHB9-201ENST00000316105 IGLV3-9A0A075B6K5 115 aa10.98□□□□□ -0.65
PCDHB9-201ENST00000316105 IGHV1-8P0DP01 117 aa10.98□□□□□ -0.65
PCDHB9-201ENST00000316105 CD24P25063 80 aa10.98□□□□□ -0.65
PCDHB9-201ENST00000316105 PRSS3P2Q8NHM4 247 aa10.98□□□□□ -0.65
PCDHB9-201ENST00000316105 UNC80Q8N2C7 3258 aa10.98□□□□□ -0.65
PCDHB9-201ENST00000316105 IGHV3-35A0A0C4DH35 117 aa10.98□□□□□ -0.65
PCDHB9-201ENST00000316105 IL4P05112 153 aa10.98□□□□□ -0.65
PCDHB9-201ENST00000316105 FAM106CPP0CH98 169 aa10.98□□□□□ -0.65
PCDHB9-201ENST00000316105 HINT1P49773 126 aaPredicted RBP10.98□□□□□ -0.65
PCDHB9-201ENST00000316105 C17orf58Q2M2W7 97 aa10.98□□□□□ -0.65
PCDHB9-201ENST00000316105 TMEM177Q53S58 311 aa10.98□□□□□ -0.65
PCDHB9-201ENST00000316105 GFI1BQ5VTD9 330 aa10.98□□□□□ -0.65
PCDHB9-201ENST00000316105 TCF23Q7RTU1 214 aa10.98□□□□□ -0.65
PCDHB9-201ENST00000316105 PPP1R27Q86WC6 154 aa10.98□□□□□ -0.65
PCDHB9-201ENST00000316105 H0YJW9 148 aa10.98□□□□□ -0.65
PCDHB9-201ENST00000316105 MFAP4P55083 255 aa10.98□□□□□ -0.65
PCDHB9-201ENST00000316105 C2orf83Q53S99 150 aa10.98□□□□□ -0.65
PCDHB9-201ENST00000316105 LINC01551Q86U37 167 aa10.98□□□□□ -0.65
PCDHB9-201ENST00000316105 SRIP30626 198 aa10.98□□□□□ -0.65
PCDHB9-201ENST00000316105 RPL24P83731 157 aaKnown RBP10.98□□□□□ -0.65
PCDHB9-201ENST00000316105 MLANAQ16655 118 aa10.98□□□□□ -0.65
PCDHB9-201ENST00000316105 C1QL4Q86Z23 238 aa10.98□□□□□ -0.65
PCDHB9-201ENST00000316105 SRSF12Q8WXF0 261 aaKnown RBP10.98□□□□□ -0.65
PCDHB9-201ENST00000316105 AGMATQ9BSE5 352 aa10.98□□□□□ -0.65
PCDHB9-201ENST00000316105 RNASE7Q9H1E1 156 aaKnown RBP10.98□□□□□ -0.65
PCDHB9-201ENST00000316105 PEX7O00628 323 aa10.97□□□□□ -0.65
PCDHB9-201ENST00000316105 FOXH1O75593 365 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms