RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 HBG1P69891 147 aa6.17□□□□□ -1.42
CNOT4-201ENST00000315544 HBG2P69892 147 aa6.17□□□□□ -1.42
CNOT4-201ENST00000315544 CD69Q07108 199 aa6.17□□□□□ -1.42
CNOT4-201ENST00000315544 LCN15Q6UWW0 184 aa6.17□□□□□ -1.42
CNOT4-201ENST00000315544 POM121L12Q8N7R1 296 aa6.17□□□□□ -1.42
CNOT4-201ENST00000315544 C18orf32Q8TCD1 76 aa6.17□□□□□ -1.42
CNOT4-201ENST00000315544 ALKBH7Q9BT30 221 aaPredicted RBP6.17□□□□□ -1.42
CNOT4-201ENST00000315544 MALRD1Q5VYJ5 2156 aa6.17□□□□□ -1.42
CNOT4-201ENST00000315544 LYZL6O75951 148 aa6.17□□□□□ -1.42
CNOT4-201ENST00000315544 CXorf1O96002 111 aa6.17□□□□□ -1.42
CNOT4-201ENST00000315544 SSTP61278 116 aa6.17□□□□□ -1.42
CNOT4-201ENST00000315544 C9orf135Q5VTT2 229 aa6.17□□□□□ -1.42
CNOT4-201ENST00000315544 MIC13Q5XKP0 118 aa6.17□□□□□ -1.42
CNOT4-201ENST00000315544 DTX2Q86UW9 622 aa6.17□□□□□ -1.42
CNOT4-201ENST00000315544 CIB3Q96Q77 187 aaPredicted RBP6.17□□□□□ -1.42
CNOT4-201ENST00000315544 FOXC2Q99958 501 aa6.17□□□□□ -1.42
CNOT4-201ENST00000315544 TMEM14CQ9P0S9 112 aa6.17□□□□□ -1.42
CNOT4-201ENST00000315544 LAMP3Q9UQV4 416 aa6.17□□□□□ -1.42
CNOT4-201ENST00000315544 DNAH6Q9C0G6 4158 aa6.17□□□□□ -1.42
CNOT4-201ENST00000315544 RBP4P02753 201 aa6.16□□□□□ -1.42
CNOT4-201ENST00000315544 FABP4P15090 132 aa6.16□□□□□ -1.42
CNOT4-201ENST00000315544 FGF7P21781 194 aa6.16□□□□□ -1.42
CNOT4-201ENST00000315544 FCGR2BP31994 310 aaPredicted RBP6.16□□□□□ -1.42
CNOT4-201ENST00000315544 NDUFA6P56556 154 aa6.16□□□□□ -1.42
CNOT4-201ENST00000315544 RPL31P62899 125 aaKnown RBP6.16□□□□□ -1.42
CNOT4-201ENST00000315544 TMEM200BQ69YZ2 307 aa6.16□□□□□ -1.42
CNOT4-201ENST00000315544 C2orf91Q6ZV80 131 aa6.16□□□□□ -1.42
CNOT4-201ENST00000315544 STX12Q86Y82 276 aa6.16□□□□□ -1.42
CNOT4-201ENST00000315544 PIFOQ8TCI5 191 aa6.16□□□□□ -1.42
CNOT4-201ENST00000315544 LINC00312Q9Y6C7 94 aa6.16□□□□□ -1.42
CNOT4-201ENST00000315544 A0A1W2PPI3 338 aa6.16□□□□□ -1.42
CNOT4-201ENST00000315544 CHRNB4P30926 498 aa6.16□□□□□ -1.42
CNOT4-201ENST00000315544 KIR2DS2P43631 304 aa6.16□□□□□ -1.42
CNOT4-201ENST00000315544 HSPE1P61604 102 aaKnown RBP6.16□□□□□ -1.42
CNOT4-201ENST00000315544 RHOGP84095 191 aa6.16□□□□□ -1.42
CNOT4-201ENST00000315544 TMEM183BQ1AE95 376 aa6.16□□□□□ -1.42
CNOT4-201ENST00000315544 UBALD1Q8TB05 177 aa6.16□□□□□ -1.42
CNOT4-201ENST00000315544 TRIB1Q96RU8 372 aa6.16□□□□□ -1.42
CNOT4-201ENST00000315544 ZNF492Q9P255 531 aa6.16□□□□□ -1.42
CNOT4-201ENST00000315544 BMP5P22003 454 aa6.16□□□□□ -1.42
CNOT4-201ENST00000315544 CDC34P49427 236 aaPredicted RBP6.16□□□□□ -1.42
CNOT4-201ENST00000315544 RHOBP62745 196 aa6.16□□□□□ -1.42
CNOT4-201ENST00000315544 PRSS57Q6UWY2 283 aa6.16□□□□□ -1.42
CNOT4-201ENST00000315544 BCL6BQ8N143 479 aaPredicted RBP6.16□□□□□ -1.42
CNOT4-201ENST00000315544 TSKUQ8WUA8 353 aa6.16□□□□□ -1.42
CNOT4-201ENST00000315544 C19orf24Q9BVV8 132 aa6.16□□□□□ -1.42
CNOT4-201ENST00000315544 DPRXA6NFQ7 191 aa6.15□□□□□ -1.42
CNOT4-201ENST00000315544 RNF212BA8MTL3 300 aa6.15□□□□□ -1.42
CNOT4-201ENST00000315544 HSPA12AO43301 675 aa6.15□□□□□ -1.42
CNOT4-201ENST00000315544 SAA1P0DJI8 122 aaPredicted RBP6.15□□□□□ -1.42
CNOT4-201ENST00000315544 HNF4GQ14541 408 aa6.15□□□□□ -1.42
CNOT4-201ENST00000315544 KLF17Q5JT82 389 aaPredicted RBP6.15□□□□□ -1.42
CNOT4-201ENST00000315544 SPANXN5Q5MJ07 72 aa6.15□□□□□ -1.42
CNOT4-201ENST00000315544 AKR1C8PQ5T2L2 129 aa6.15□□□□□ -1.42
CNOT4-201ENST00000315544 OR2T10Q8NGZ9 312 aa6.15□□□□□ -1.42
CNOT4-201ENST00000315544 PRM3Q9NNZ6 103 aa6.15□□□□□ -1.42
CNOT4-201ENST00000315544 DUSP13Q9UII6 198 aa6.15□□□□□ -1.42
CNOT4-201ENST00000315544 A6NNC1 897 aa6.15□□□□□ -1.42
CNOT4-201ENST00000315544 RPS10P46783 165 aaKnown RBP6.15□□□□□ -1.42
CNOT4-201ENST00000315544 SAPCD1Q5SSQ6 148 aa6.15□□□□□ -1.42
CNOT4-201ENST00000315544 FAM180AQ6UWF9 173 aa6.15□□□□□ -1.42
CNOT4-201ENST00000315544 NPBQ8NG41 125 aa6.15□□□□□ -1.42
CNOT4-201ENST00000315544 TMEM160Q9NX00 188 aa6.15□□□□□ -1.42
CNOT4-201ENST00000315544 TMEM178BH3BS89 294 aa6.15□□□□□ -1.43
CNOT4-201ENST00000315544 SERF1AO75920 110 aa6.15□□□□□ -1.43
CNOT4-201ENST00000315544 KRASP01116 189 aa6.15□□□□□ -1.43
CNOT4-201ENST00000315544 IGLC3P0DOY3 106 aa6.15□□□□□ -1.43
CNOT4-201ENST00000315544 CD33P20138 364 aa6.15□□□□□ -1.43
CNOT4-201ENST00000315544 CACNG8Q8WXS5 425 aa6.15□□□□□ -1.43
CNOT4-201ENST00000315544 RNASE6Q93091 150 aaKnown RBP6.15□□□□□ -1.43
CNOT4-201ENST00000315544 SMIM7Q9BQ49 75 aa6.15□□□□□ -1.43
CNOT4-201ENST00000315544 NPVFQ9HCQ7 196 aa6.15□□□□□ -1.43
CNOT4-201ENST00000315544 DNAJC4Q9NNZ3 241 aa6.15□□□□□ -1.43
CNOT4-201ENST00000315544 PPP1R14DQ9NXH3 145 aa6.15□□□□□ -1.43
CNOT4-201ENST00000315544 SMAD5-AS1Q9Y6J3 95 aa6.15□□□□□ -1.43
CNOT4-201ENST00000315544 URGCP-MRPS24S4R325 110 aa6.15□□□□□ -1.43
CNOT4-201ENST00000315544 PLAUP00749 431 aa6.14□□□□□ -1.43
CNOT4-201ENST00000315544 MEF2CQ06413 473 aaPredicted RBP6.14□□□□□ -1.43
CNOT4-201ENST00000315544 MMDQ15546 238 aa6.14□□□□□ -1.43
CNOT4-201ENST00000315544 OR10W1Q8NGF6 305 aa6.14□□□□□ -1.43
CNOT4-201ENST00000315544 NCOR2Q9Y618 2525 aa6.14□□□□□ -1.43
CNOT4-201ENST00000315544 IGF2RP11717 2491 aa6.14□□□□□ -1.43
CNOT4-201ENST00000315544 K7EP13 123 aa6.14□□□□□ -1.43
CNOT4-201ENST00000315544 GABRA2P47869 451 aa6.14□□□□□ -1.43
CNOT4-201ENST00000315544 SRSF2Q01130 221 aaKnown RBP6.14□□□□□ -1.43
CNOT4-201ENST00000315544 OR9G1Q8NH87 305 aa6.14□□□□□ -1.43
CNOT4-201ENST00000315544 GFRA4Q9GZZ7 299 aa6.14□□□□□ -1.43
CNOT4-201ENST00000315544 C12orf49Q9H741 205 aa6.14□□□□□ -1.43
CNOT4-201ENST00000315544 AMMECR1Q9Y4X0 333 aaPredicted RBP6.14□□□□□ -1.43
CNOT4-201ENST00000315544 BRI3O95415 125 aa6.14□□□□□ -1.43
CNOT4-201ENST00000315544 CRIP2P52943 208 aaPredicted RBP6.14□□□□□ -1.43
CNOT4-201ENST00000315544 RBX1P62877 108 aa6.14□□□□□ -1.43
CNOT4-201ENST00000315544 PSG5Q15238 335 aa6.14□□□□□ -1.43
CNOT4-201ENST00000315544 OR5B3Q8NH48 314 aa6.14□□□□□ -1.43
CNOT4-201ENST00000315544 LHX4Q969G2 390 aa6.14□□□□□ -1.43
CNOT4-201ENST00000315544 IGHV2-26A0A0B4J1V2 119 aa6.13□□□□□ -1.43
CNOT4-201ENST00000315544 XKRY2A2RUG3 117 aa6.13□□□□□ -1.43
CNOT4-201ENST00000315544 CEACAM3P40198 252 aa6.13□□□□□ -1.43
CNOT4-201ENST00000315544 ZNF124Q15973 351 aa6.13□□□□□ -1.43
CNOT4-201ENST00000315544 FAM201AQ5SY85 155 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms