RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 MT-CO2P00403 227 aa14.63□□□□□ -0.07
CCDC43-201ENST00000315286 OR5G3P0C626 314 aa14.63□□□□□ -0.07
CCDC43-201ENST00000315286 RAB5AP20339 215 aa14.63□□□□□ -0.07
CCDC43-201ENST00000315286 ADIRFQ15847 76 aa14.63□□□□□ -0.07
CCDC43-201ENST00000315286 ZNF343Q6P1L6 599 aa14.63□□□□□ -0.07
CCDC43-201ENST00000315286 C19orf24Q9BVV8 132 aa14.63□□□□□ -0.07
CCDC43-201ENST00000315286 DMRT1Q9Y5R6 373 aa14.63□□□□□ -0.07
CCDC43-201ENST00000315286 F11RQ9Y624 299 aaKnown RBP14.63□□□□□ -0.07
CCDC43-201ENST00000315286 TCRBV4S1A1TA0A5B7 111 aa14.62□□□□□ -0.07
CCDC43-201ENST00000315286 NDUFA3O95167 84 aa14.62□□□□□ -0.07
CCDC43-201ENST00000315286 CNIH1O95406 144 aa14.62□□□□□ -0.07
CCDC43-201ENST00000315286 PDLIM4P50479 330 aa14.62□□□□□ -0.07
CCDC43-201ENST00000315286 RPL23P62829 140 aaKnown RBP14.62□□□□□ -0.07
CCDC43-201ENST00000315286 MINOS1Q5TGZ0 78 aa14.62□□□□□ -0.07
CCDC43-201ENST00000315286 ETFRF1Q6IPR1 90 aa14.62□□□□□ -0.07
CCDC43-201ENST00000315286 ZFP82Q8N141 532 aa14.62□□□□□ -0.07
CCDC43-201ENST00000315286 TBX15Q96SF7 602 aa14.62□□□□□ -0.07
CCDC43-201ENST00000315286 MINOS1-NBL1R4GNA1 71 aa14.62□□□□□ -0.07
CCDC43-201ENST00000315286 SPG11Q96JI7 2443 aa14.62□□□□□ -0.07
CCDC43-201ENST00000315286 IGHV3-21A0A0B4J1V1 117 aa14.62□□□□□ -0.07
CCDC43-201ENST00000315286 CLN5O75503 358 aa14.62□□□□□ -0.07
CCDC43-201ENST00000315286 CCDC144NLQ6NUI1 221 aa14.62□□□□□ -0.07
CCDC43-201ENST00000315286 ZNF503Q96F45 646 aa14.62□□□□□ -0.07
CCDC43-201ENST00000315286 CCL19Q99731 98 aa14.62□□□□□ -0.07
CCDC43-201ENST00000315286 TECRQ9NZ01 308 aaKnown RBP14.62□□□□□ -0.07
CCDC43-201ENST00000315286 URGCP-MRPS24S4R325 110 aa14.62□□□□□ -0.07
CCDC43-201ENST00000315286 CXorf65A6NEN9 183 aa14.61□□□□□ -0.07
CCDC43-201ENST00000315286 NDUFB4O95168 129 aa14.61□□□□□ -0.07
CCDC43-201ENST00000315286 GOSR1O95249 250 aa14.61□□□□□ -0.07
CCDC43-201ENST00000315286 ELOBQ15370 118 aa14.61□□□□□ -0.07
CCDC43-201ENST00000315286 OR2T10Q8NGZ9 312 aa14.61□□□□□ -0.07
CCDC43-201ENST00000315286 TXNDC17Q9BRA2 123 aa14.61□□□□□ -0.07
CCDC43-201ENST00000315286 DNAJC4Q9NNZ3 241 aa14.61□□□□□ -0.07
CCDC43-201ENST00000315286 UTP20O75691 2785 aaKnown RBP14.61□□□□□ -0.07
CCDC43-201ENST00000315286 OOSP1A8MZH6 123 aa14.61□□□□□ -0.07
CCDC43-201ENST00000315286 F6UZH7 168 aa14.61□□□□□ -0.07
CCDC43-201ENST00000315286 Q8WTZ3 238 aa14.61□□□□□ -0.07
CCDC43-201ENST00000315286 DERL1Q9BUN8 251 aa14.61□□□□□ -0.07
CCDC43-201ENST00000315286 TMEM242Q9NWH2 141 aa14.61□□□□□ -0.07
CCDC43-201ENST00000315286 DOK5Q9P104 306 aa14.61□□□□□ -0.07
CCDC43-201ENST00000315286 ZNF462Q96JM2 2506 aa14.6□□□□□ -0.07
CCDC43-201ENST00000315286 VPS13CQ709C8 3753 aa14.6□□□□□ -0.07
CCDC43-201ENST00000315286 CORTO00230 105 aa14.6□□□□□ -0.07
CCDC43-201ENST00000315286 C5orf64Q2M2E5 130 aa14.6□□□□□ -0.07
CCDC43-201ENST00000315286 MORN5Q5VZ52 161 aa14.6□□□□□ -0.07
CCDC43-201ENST00000315286 C2CD4CQ8TF44 421 aa14.6□□□□□ -0.07
CCDC43-201ENST00000315286 LPAR2Q9HBW0 351 aa14.6□□□□□ -0.07
CCDC43-201ENST00000315286 TNFRSF19Q9NS68 423 aa14.6□□□□□ -0.07
CCDC43-201ENST00000315286 CSMD1Q96PZ7 3565 aa14.6□□□□□ -0.07
CCDC43-201ENST00000315286 PATE2Q6UY27 113 aa14.59□□□□□ -0.07
CCDC43-201ENST00000315286 TMEM116Q8NCL8 245 aa14.59□□□□□ -0.07
CCDC43-201ENST00000315286 SSX3Q99909 188 aa14.59□□□□□ -0.07
CCDC43-201ENST00000315286 SRSF8Q9BRL6 282 aaKnown RBP14.59□□□□□ -0.07
CCDC43-201ENST00000315286 WNT10AQ9GZT5 417 aa14.59□□□□□ -0.07
CCDC43-201ENST00000315286 ABCA2Q9BZC7 2435 aa14.59□□□□□ -0.07
CCDC43-201ENST00000315286 TRAV5A0A0B4J249 113 aa14.59□□□□□ -0.07
CCDC43-201ENST00000315286 SCO2A0A1W2PP80 73 aa14.59□□□□□ -0.07
CCDC43-201ENST00000315286 OR7C2O60412 319 aa14.59□□□□□ -0.07
CCDC43-201ENST00000315286 CXCL1P09341 107 aa14.59□□□□□ -0.07
CCDC43-201ENST00000315286 C8orf88P0DMB2 117 aa14.59□□□□□ -0.07
CCDC43-201ENST00000315286 UBE2E1P51965 193 aa14.59□□□□□ -0.07
CCDC43-201ENST00000315286 TAS2R45P59539 299 aa14.59□□□□□ -0.07
CCDC43-201ENST00000315286 SELENOTP62341 195 aa14.59□□□□□ -0.07
CCDC43-201ENST00000315286 FXYD3Q14802 87 aa14.59□□□□□ -0.07
CCDC43-201ENST00000315286 PQLC2Q6ZP29 291 aa14.59□□□□□ -0.07
CCDC43-201ENST00000315286 OR4X1Q8NH49 305 aa14.59□□□□□ -0.07
CCDC43-201ENST00000315286 FAM103A1Q9BTL3 118 aaKnown RBP14.59□□□□□ -0.07
CCDC43-201ENST00000315286 TMEM167BQ9NRX6 74 aa14.59□□□□□ -0.07
CCDC43-201ENST00000315286 C1orf196B1AJZ1 125 aa14.58□□□□□ -0.08
CCDC43-201ENST00000315286 CLDN34H7C241 214 aa14.58□□□□□ -0.08
CCDC43-201ENST00000315286 COX7A2P2O60397 106 aa14.58□□□□□ -0.08
CCDC43-201ENST00000315286 Q8N6K4 173 aa14.58□□□□□ -0.08
CCDC43-201ENST00000315286 AJUBAQ96IF1 538 aa14.58□□□□□ -0.08
CCDC43-201ENST00000315286 FAM167A-AS1Q96KT0 104 aa14.58□□□□□ -0.08
CCDC43-201ENST00000315286 MRPL32Q9BYC8 188 aaKnown RBP14.58□□□□□ -0.08
CCDC43-201ENST00000315286 CRYBG3Q68DQ2 2970 aa14.58□□□□□ -0.08
CCDC43-201ENST00000315286 TGIF2-C20orf24A0A0A6YYL0 155 aa14.57□□□□□ -0.08
CCDC43-201ENST00000315286 OR10J4P0C629 311 aa14.57□□□□□ -0.08
CCDC43-201ENST00000315286 CTRB1P17538 263 aa14.57□□□□□ -0.08
CCDC43-201ENST00000315286 EBI3Q14213 229 aa14.57□□□□□ -0.08
CCDC43-201ENST00000315286 CTRB2Q6GPI1 263 aa14.57□□□□□ -0.08
CCDC43-201ENST00000315286 C22orf15Q8WYQ4 148 aa14.57□□□□□ -0.08
CCDC43-201ENST00000315286 FAM168AQ92567 244 aa14.57□□□□□ -0.08
CCDC43-201ENST00000315286 MALSU1Q96EH3 234 aa14.57□□□□□ -0.08
CCDC43-201ENST00000315286 RNF2Q99496 336 aa14.57□□□□□ -0.08
CCDC43-201ENST00000315286 TRGV9Q99603 122 aa14.57□□□□□ -0.08
CCDC43-201ENST00000315286 SPOCK3Q9BQ16 436 aa14.57□□□□□ -0.08
CCDC43-201ENST00000315286 CTDSP1Q9GZU7 261 aa14.57□□□□□ -0.08
CCDC43-201ENST00000315286 TBL2Q9Y4P3 447 aaKnown RBP14.57□□□□□ -0.08
CCDC43-201ENST00000315286 NCBP2LA6PVI3 153 aaKnown RBP14.57□□□□□ -0.08
CCDC43-201ENST00000315286 RAB5BP61020 215 aa14.57□□□□□ -0.08
CCDC43-201ENST00000315286 SMUG1Q53HV7 270 aa14.57□□□□□ -0.08
CCDC43-201ENST00000315286 C10orf113Q5VZT2 155 aa14.57□□□□□ -0.08
CCDC43-201ENST00000315286 OR1L4Q8NGR5 311 aa14.57□□□□□ -0.08
CCDC43-201ENST00000315286 UHRF2Q96PU4 802 aa14.57□□□□□ -0.08
CCDC43-201ENST00000315286 PFDN5Q99471 154 aa14.57□□□□□ -0.08
CCDC43-201ENST00000315286 SLC25A2Q9BXI2 301 aa14.57□□□□□ -0.08
CCDC43-201ENST00000315286 GSX1Q9H4S2 264 aaPredicted RBP14.57□□□□□ -0.08
CCDC43-201ENST00000315286 KLF2Q9Y5W3 355 aaPredicted RBP14.57□□□□□ -0.08
CCDC43-201ENST00000315286 I3L2K1 104 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms