RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 CDX4O14627 284 aaPredicted RBP11.26□□□□□ -0.61
MKS1-201ENST00000313863 MFAP2P55001 183 aa11.26□□□□□ -0.61
MKS1-201ENST00000313863 RPL8P62917 257 aaKnown RBP11.26□□□□□ -0.61
MKS1-201ENST00000313863 TNFAIP6P98066 277 aaPredicted RBP11.26□□□□□ -0.61
MKS1-201ENST00000313863 UTF1Q5T230 341 aa11.26□□□□□ -0.61
MKS1-201ENST00000313863 ZNF788Q6ZQV5 615 aa11.26□□□□□ -0.61
MKS1-201ENST00000313863 C11orf42Q8N5U0 333 aa11.26□□□□□ -0.61
MKS1-201ENST00000313863 ASCL3Q9NQ33 180 aa11.26□□□□□ -0.61
MKS1-201ENST00000313863 LINC00312Q9Y6C7 94 aa11.26□□□□□ -0.61
MKS1-201ENST00000313863 MBD3L4A6NDZ8 208 aaPredicted RBP11.25□□□□□ -0.61
MKS1-201ENST00000313863 MBD3L3A6NE82 208 aaPredicted RBP11.25□□□□□ -0.61
MKS1-201ENST00000313863 MBD3L5A6NJ08 208 aaPredicted RBP11.25□□□□□ -0.61
MKS1-201ENST00000313863 NKX6-3A6NJ46 265 aa11.25□□□□□ -0.61
MKS1-201ENST00000313863 SRRM4A7MD48 611 aaKnown RBP11.25□□□□□ -0.61
MKS1-201ENST00000313863 OR2J3O76001 311 aa11.25□□□□□ -0.61
MKS1-201ENST00000313863 IGKV1-16P04430 117 aa11.25□□□□□ -0.61
MKS1-201ENST00000313863 MMDQ15546 238 aa11.25□□□□□ -0.61
MKS1-201ENST00000313863 ZNF329Q86UD4 541 aa11.25□□□□□ -0.61
MKS1-201ENST00000313863 FDCSPQ8NFU4 85 aa11.25□□□□□ -0.61
MKS1-201ENST00000313863 MBD3L2Q8NHZ7 208 aaPredicted RBP11.25□□□□□ -0.61
MKS1-201ENST00000313863 HARBI1Q96MB7 349 aa11.25□□□□□ -0.61
MKS1-201ENST00000313863 TCRBV4S1A1TA0A5B7 111 aa11.24□□□□□ -0.61
MKS1-201ENST00000313863 SP9P0CG40 484 aa11.24□□□□□ -0.61
MKS1-201ENST00000313863 SLAQ13239 276 aa11.24□□□□□ -0.61
MKS1-201ENST00000313863 TMEM177Q53S58 311 aa11.24□□□□□ -0.61
MKS1-201ENST00000313863 SPRNQ5BIV9 151 aa11.24□□□□□ -0.61
MKS1-201ENST00000313863 ORAOV1Q8WV07 137 aa11.24□□□□□ -0.61
MKS1-201ENST00000313863 ZNF355PQ9NSJ1 428 aa11.24□□□□□ -0.61
MKS1-201ENST00000313863 M0R2Z0 102 aa11.24□□□□□ -0.61
MKS1-201ENST00000313863 SIAH2O43255 324 aa11.24□□□□□ -0.61
MKS1-201ENST00000313863 CA7P43166 264 aa11.24□□□□□ -0.61
MKS1-201ENST00000313863 UBE2G1P62253 170 aa11.24□□□□□ -0.61
MKS1-201ENST00000313863 MEF2CQ06413 473 aaPredicted RBP11.24□□□□□ -0.61
MKS1-201ENST00000313863 NUP35Q8NFH5 326 aa11.24□□□□□ -0.61
MKS1-201ENST00000313863 NUDT10Q8NFP7 164 aa11.24□□□□□ -0.61
MKS1-201ENST00000313863 TMEM167AQ8TBQ9 72 aa11.24□□□□□ -0.61
MKS1-201ENST00000313863 NUDT11Q96G61 164 aa11.24□□□□□ -0.61
MKS1-201ENST00000313863 GUCD1Q96NT3 240 aa11.24□□□□□ -0.61
MKS1-201ENST00000313863 CCL13Q99616 98 aa11.24□□□□□ -0.61
MKS1-201ENST00000313863 SOX21Q9Y651 276 aaPredicted RBP11.24□□□□□ -0.61
MKS1-201ENST00000313863 TNRC18O15417 2968 aaPredicted RBP11.23□□□□□ -0.61
MKS1-201ENST00000313863 TRAV9-2A0A087WT02 112 aa11.23□□□□□ -0.61
MKS1-201ENST00000313863 FAM181BA6NEQ2 426 aa11.23□□□□□ -0.61
MKS1-201ENST00000313863 FAM201AQ5SY85 155 aa11.23□□□□□ -0.61
MKS1-201ENST00000313863 FAM71F2Q6NXP2 309 aa11.23□□□□□ -0.61
MKS1-201ENST00000313863 VHLLQ6RSH7 139 aa11.23□□□□□ -0.61
MKS1-201ENST00000313863 SPACA3Q8IXA5 215 aa11.23□□□□□ -0.61
MKS1-201ENST00000313863 FAM19A2Q8N3H0 131 aa11.23□□□□□ -0.61
MKS1-201ENST00000313863 THAP8Q8NA92 274 aa11.23□□□□□ -0.61
MKS1-201ENST00000313863 FLYWCH2Q96CP2 140 aaKnown RBP11.23□□□□□ -0.61
MKS1-201ENST00000313863 SNRNP40Q96DI7 357 aaKnown RBP11.23□□□□□ -0.61
MKS1-201ENST00000313863 DMDP11532 3685 aa11.23□□□□□ -0.61
MKS1-201ENST00000313863 TRAV5A0A0B4J249 113 aa11.23□□□□□ -0.61
MKS1-201ENST00000313863 TEX36Q5VZQ5 186 aa11.23□□□□□ -0.61
MKS1-201ENST00000313863 ETFRF1Q6IPR1 90 aa11.23□□□□□ -0.61
MKS1-201ENST00000313863 ALKBH2Q6NS38 261 aa11.23□□□□□ -0.61
MKS1-201ENST00000313863 PDPNQ86YL7 162 aa11.23□□□□□ -0.61
MKS1-201ENST00000313863 RBMXL3Q8N7X1 1067 aaKnown RBP11.23□□□□□ -0.61
MKS1-201ENST00000313863 NHLRC2Q8NBF2 726 aa11.23□□□□□ -0.61
MKS1-201ENST00000313863 DEFB108BQ8NET1 73 aa11.23□□□□□ -0.61
MKS1-201ENST00000313863 OR10W1Q8NGF6 305 aa11.23□□□□□ -0.61
MKS1-201ENST00000313863 OR8B3Q8NGG8 313 aa11.23□□□□□ -0.61
MKS1-201ENST00000313863 OR2T6Q8NHC8 308 aa11.23□□□□□ -0.61
MKS1-201ENST00000313863 OR8B2Q96RD0 313 aa11.23□□□□□ -0.61
MKS1-201ENST00000313863 ALKBH7Q9BT30 221 aaPredicted RBP11.23□□□□□ -0.61
MKS1-201ENST00000313863 SSBP3Q9BWW4 388 aaPredicted RBP11.23□□□□□ -0.61
MKS1-201ENST00000313863 CLEC7AQ9BXN2 247 aa11.23□□□□□ -0.61
MKS1-201ENST00000313863 WNT10AQ9GZT5 417 aa11.23□□□□□ -0.61
MKS1-201ENST00000313863 DYSFO75923 2080 aa11.22□□□□□ -0.61
MKS1-201ENST00000313863 NKX2-8O15522 239 aa11.22□□□□□ -0.61
MKS1-201ENST00000313863 CA1P00915 261 aaPredicted RBP11.22□□□□□ -0.61
MKS1-201ENST00000313863 IGHV1-46P01743 117 aa11.22□□□□□ -0.61
MKS1-201ENST00000313863 TSPOP30536 169 aa11.22□□□□□ -0.61
MKS1-201ENST00000313863 TFPI2P48307 235 aa11.22□□□□□ -0.61
MKS1-201ENST00000313863 MLANAQ16655 118 aa11.22□□□□□ -0.61
MKS1-201ENST00000313863 DMRTA1Q5VZB9 504 aa11.22□□□□□ -0.61
MKS1-201ENST00000313863 OR5AN1Q8NGI8 311 aa11.22□□□□□ -0.61
MKS1-201ENST00000313863 OR4C13Q8NGP0 309 aa11.22□□□□□ -0.61
MKS1-201ENST00000313863 PERPQ96FX8 193 aa11.22□□□□□ -0.61
MKS1-201ENST00000313863 MRPL20Q9BYC9 149 aaKnown RBP11.22□□□□□ -0.61
MKS1-201ENST00000313863 SSUH2Q9Y2M2 353 aa11.22□□□□□ -0.61
MKS1-201ENST00000313863 H0YJW9 148 aa11.21□□□□□ -0.61
MKS1-201ENST00000313863 COL8A2P25067 703 aa11.21□□□□□ -0.61
MKS1-201ENST00000313863 TNXAQ16473 311 aa11.21□□□□□ -0.61
MKS1-201ENST00000313863 C21orf62-AS1Q17RA5 79 aa11.21□□□□□ -0.61
MKS1-201ENST00000313863 CT83Q5H943 113 aa11.21□□□□□ -0.61
MKS1-201ENST00000313863 FAM216BQ8N7L0 139 aa11.21□□□□□ -0.61
MKS1-201ENST00000313863 FAM168AQ92567 244 aa11.21□□□□□ -0.61
MKS1-201ENST00000313863 TNFRSF19Q9NS68 423 aa11.21□□□□□ -0.61
MKS1-201ENST00000313863 PYYP10082 97 aa11.21□□□□□ -0.62
MKS1-201ENST00000313863 RNASEKQ6P5S7 137 aaKnown RBP11.21□□□□□ -0.62
MKS1-201ENST00000313863 DUX4L9Q6RFH8 374 aaPredicted RBP11.21□□□□□ -0.62
MKS1-201ENST00000313863 STPG4Q8N801 248 aa11.21□□□□□ -0.62
MKS1-201ENST00000313863 C22orf15Q8WYQ4 148 aa11.21□□□□□ -0.62
MKS1-201ENST00000313863 RND1Q92730 232 aa11.21□□□□□ -0.62
MKS1-201ENST00000313863 FXYD5Q96DB9 178 aa11.21□□□□□ -0.62
MKS1-201ENST00000313863 FRYQ5TBA9 3013 aa11.21□□□□□ -0.62
MKS1-201ENST00000313863 GPR179Q6PRD1 2367 aa11.2□□□□□ -0.62
MKS1-201ENST00000313863 IGHV2-26A0A0B4J1V2 119 aa11.2□□□□□ -0.62
MKS1-201ENST00000313863 HIGD1CA8MV81 97 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms