RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 NUPL2O15504 423 aaKnown RBP10.86□□□□□ -0.67
PPP1CA-201ENST00000312989 TMEM50AO95807 157 aa10.86□□□□□ -0.67
PPP1CA-201ENST00000312989 RELQ04864 619 aaPredicted RBP10.86□□□□□ -0.67
PPP1CA-201ENST00000312989 PYDC2Q56P42 97 aa10.86□□□□□ -0.67
PPP1CA-201ENST00000312989 TOMM20LQ6UXN7 152 aa10.86□□□□□ -0.67
PPP1CA-201ENST00000312989 LYZL2Q7Z4W2 148 aa10.86□□□□□ -0.67
PPP1CA-201ENST00000312989 LILRB2Q8N423 598 aa10.86□□□□□ -0.67
PPP1CA-201ENST00000312989 OR52B4Q8NGK2 314 aa10.86□□□□□ -0.67
PPP1CA-201ENST00000312989 MUC7Q8TAX7 377 aa10.86□□□□□ -0.67
PPP1CA-201ENST00000312989 RNF2Q99496 336 aa10.86□□□□□ -0.67
PPP1CA-201ENST00000312989 SHPKQ9UHJ6 478 aa10.86□□□□□ -0.67
PPP1CA-201ENST00000312989 C3orf84H3BNL1 204 aa10.85□□□□□ -0.67
PPP1CA-201ENST00000312989 IGKV1-17P01599 117 aa10.85□□□□□ -0.67
PPP1CA-201ENST00000312989 APOHP02749 345 aaPredicted RBP10.85□□□□□ -0.67
PPP1CA-201ENST00000312989 SNCAP37840 140 aa10.85□□□□□ -0.67
PPP1CA-201ENST00000312989 BAK1Q16611 211 aa10.85□□□□□ -0.67
PPP1CA-201ENST00000312989 C2orf83Q53S99 150 aa10.85□□□□□ -0.67
PPP1CA-201ENST00000312989 SLC16A13Q7RTY0 426 aa10.85□□□□□ -0.67
PPP1CA-201ENST00000312989 TOMM5Q8N4H5 51 aa10.85□□□□□ -0.67
PPP1CA-201ENST00000312989 OR4X1Q8NH49 305 aa10.85□□□□□ -0.67
PPP1CA-201ENST00000312989 PDCD10Q9BUL8 212 aa10.85□□□□□ -0.67
PPP1CA-201ENST00000312989 HYDINQ4G0P3 5121 aa10.84□□□□□ -0.67
PPP1CA-201ENST00000312989 IGHV3-49A0A0A0MS15 119 aa10.84□□□□□ -0.67
PPP1CA-201ENST00000312989 CORTO00230 105 aa10.84□□□□□ -0.67
PPP1CA-201ENST00000312989 GNG7O60262 68 aa10.84□□□□□ -0.67
PPP1CA-201ENST00000312989 PITX3O75364 302 aa10.84□□□□□ -0.67
PPP1CA-201ENST00000312989 CLN5O75503 358 aa10.84□□□□□ -0.67
PPP1CA-201ENST00000312989 NXPH3O95157 252 aa10.84□□□□□ -0.67
PPP1CA-201ENST00000312989 AKR1C4P17516 323 aa10.84□□□□□ -0.67
PPP1CA-201ENST00000312989 NPBWR1P48145 328 aa10.84□□□□□ -0.67
PPP1CA-201ENST00000312989 ANKRD55Q3KP44 614 aa10.84□□□□□ -0.67
PPP1CA-201ENST00000312989 CASC10Q5T4H9 136 aa10.84□□□□□ -0.67
PPP1CA-201ENST00000312989 RBPMS2Q6ZRY4 209 aaKnown RBP10.84□□□□□ -0.67
PPP1CA-201ENST00000312989 DUSP18Q8NEJ0 188 aa10.84□□□□□ -0.67
PPP1CA-201ENST00000312989 RNASE11Q8TAA1 199 aaKnown RBP10.84□□□□□ -0.67
PPP1CA-201ENST00000312989 DEDD2Q8WXF8 326 aa10.84□□□□□ -0.67
PPP1CA-201ENST00000312989 SCGB3A2Q96PL1 93 aa10.84□□□□□ -0.67
PPP1CA-201ENST00000312989 RHPN1-AS1Q9BWJ2 59 aa10.84□□□□□ -0.67
PPP1CA-201ENST00000312989 VSIRQ9H7M9 311 aa10.84□□□□□ -0.67
PPP1CA-201ENST00000312989 HSPB7Q9UBY9 170 aa10.84□□□□□ -0.67
PPP1CA-201ENST00000312989 SULT1A3P0DMM9 295 aa10.83□□□□□ -0.68
PPP1CA-201ENST00000312989 SULT1A4P0DMN0 295 aa10.83□□□□□ -0.68
PPP1CA-201ENST00000312989 ZNF600Q6ZNG1 722 aa10.83□□□□□ -0.68
PPP1CA-201ENST00000312989 LRTM2Q8N967 370 aa10.83□□□□□ -0.68
PPP1CA-201ENST00000312989 TMEM116Q8NCL8 245 aa10.83□□□□□ -0.68
PPP1CA-201ENST00000312989 SLC24A4Q8NFF2 622 aa10.83□□□□□ -0.68
PPP1CA-201ENST00000312989 FAM110AQ9BQ89 295 aa10.83□□□□□ -0.68
PPP1CA-201ENST00000312989 PUS1Q9Y606 427 aaKnown RBP eCLIP10.83□□□□□ -0.68
PPP1CA-201ENST00000312989 IGHV3OR16-13A0A075B7E8 117 aa10.82□□□□□ -0.68
PPP1CA-201ENST00000312989 IGHV3-74A0A0B4J1X5 117 aa10.82□□□□□ -0.68
PPP1CA-201ENST00000312989 IGLC1P0CG04 106 aa10.82□□□□□ -0.68
PPP1CA-201ENST00000312989 S100A5P33763 92 aa10.82□□□□□ -0.68
PPP1CA-201ENST00000312989 BTCP35070 178 aa10.82□□□□□ -0.68
PPP1CA-201ENST00000312989 HTR2BP41595 481 aa10.82□□□□□ -0.68
PPP1CA-201ENST00000312989 AP3S2P59780 193 aa10.82□□□□□ -0.68
PPP1CA-201ENST00000312989 TNFRSF9Q07011 255 aa10.82□□□□□ -0.68
PPP1CA-201ENST00000312989 TMEM128Q5BJH2 165 aa10.82□□□□□ -0.68
PPP1CA-201ENST00000312989 PRSS54Q6PEW0 395 aa10.82□□□□□ -0.68
PPP1CA-201ENST00000312989 ST8SIA2Q92186 375 aa10.82□□□□□ -0.68
PPP1CA-201ENST00000312989 UBQLN2Q9UHD9 624 aa10.82□□□□□ -0.68
PPP1CA-201ENST00000312989 KCNIP3Q9Y2W7 256 aa10.82□□□□□ -0.68
PPP1CA-201ENST00000312989 TRAV14DV4A0A0A6YYC5 116 aa10.81□□□□□ -0.68
PPP1CA-201ENST00000312989 YIF1AO95070 293 aa10.81□□□□□ -0.68
PPP1CA-201ENST00000312989 FAUP35544 74 aaKnown RBP10.81□□□□□ -0.68
PPP1CA-201ENST00000312989 OPRK1P41145 380 aa10.81□□□□□ -0.68
PPP1CA-201ENST00000312989 CCR6P51684 374 aa10.81□□□□□ -0.68
PPP1CA-201ENST00000312989 SUB1P53999 127 aaKnown RBP eCLIP10.81□□□□□ -0.681e-12■■□□□ 11.6
PPP1CA-201ENST00000312989 PPP1R1AQ13522 171 aa10.81□□□□□ -0.68
PPP1CA-201ENST00000312989 SMCO1Q147U7 214 aa10.81□□□□□ -0.68
PPP1CA-201ENST00000312989 TMED4Q7Z7H5 227 aa10.81□□□□□ -0.68
PPP1CA-201ENST00000312989 LGI3Q8N145 548 aa10.81□□□□□ -0.68
PPP1CA-201ENST00000312989 RNASEH2CQ8TDP1 164 aaKnown RBP10.81□□□□□ -0.68
PPP1CA-201ENST00000312989 SLC25A21Q9BQT8 299 aaPredicted RBP10.81□□□□□ -0.68
PPP1CA-201ENST00000312989 GGTLC1Q9BX51 225 aa10.81□□□□□ -0.68
PPP1CA-201ENST00000312989 ZNF124Q15973 351 aa10.8□□□□□ -0.68
PPP1CA-201ENST00000312989 TIGITQ495A1 244 aa10.8□□□□□ -0.68
PPP1CA-201ENST00000312989 RBKSQ9H477 322 aa10.8□□□□□ -0.68
PPP1CA-201ENST00000312989 ENY2Q9NPA8 101 aa10.8□□□□□ -0.68
PPP1CA-201ENST00000312989 HEYLQ9NQ87 328 aaPredicted RBP10.8□□□□□ -0.68
PPP1CA-201ENST00000312989 U3KQE9 123 aa10.8□□□□□ -0.68
PPP1CA-201ENST00000312989 ALMS1Q8TCU4 4167 aa10.8□□□□□ -0.68
PPP1CA-201ENST00000312989 LOC102724200A0A096LPH7 203 aaPredicted RBP10.79□□□□□ -0.68
PPP1CA-201ENST00000312989 DUXBA0A1W2PPF3 345 aa10.79□□□□□ -0.68
PPP1CA-201ENST00000312989 CEBPZOSA8MTT3 80 aa10.79□□□□□ -0.68
PPP1CA-201ENST00000312989 SFT2D2O95562 160 aa10.79□□□□□ -0.68
PPP1CA-201ENST00000312989 NPY1RP25929 384 aa10.79□□□□□ -0.68
PPP1CA-201ENST00000312989 CRYBB3P26998 211 aa10.79□□□□□ -0.68
PPP1CA-201ENST00000312989 SRPXP78539 464 aa10.79□□□□□ -0.68
PPP1CA-201ENST00000312989 LAMTOR1Q6IAA8 161 aa10.79□□□□□ -0.68
PPP1CA-201ENST00000312989 FAM24BQ8N5W8 94 aa10.79□□□□□ -0.68
PPP1CA-201ENST00000312989 OVOL2Q9BRP0 275 aa10.79□□□□□ -0.68
PPP1CA-201ENST00000312989 TENM2Q9NT68 2774 aa10.79□□□□□ -0.68
PPP1CA-201ENST00000312989 IGHV3-66A0A0C4DH42 116 aa10.78□□□□□ -0.68
PPP1CA-201ENST00000312989 OR4C46A6NHA9 309 aa10.78□□□□□ -0.68
PPP1CA-201ENST00000312989 RND2P52198 227 aa10.78□□□□□ -0.68
PPP1CA-201ENST00000312989 SPANXN2Q5MJ10 180 aa10.78□□□□□ -0.68
PPP1CA-201ENST00000312989 DTD1Q8TEA8 209 aa10.78□□□□□ -0.68
PPP1CA-201ENST00000312989 IGKV1D-37A0A075B6S9 117 aa10.77□□□□□ -0.68
PPP1CA-201ENST00000312989 DFFBO76075 338 aa10.77□□□□□ -0.68
PPP1CA-201ENST00000312989 NDUFB6O95139 128 aa10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms