RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 A0A0U1RQK1 487 aa13.25□□□□□ -0.29
CLCF1-201ENST00000312438 TCRBV4S1A1TA0A5B7 111 aa13.25□□□□□ -0.29
CLCF1-201ENST00000312438 NPIPB5A8MRT5 1133 aa13.25□□□□□ -0.29
CLCF1-201ENST00000312438 J3QLI3 93 aa13.25□□□□□ -0.29
CLCF1-201ENST00000312438 SNAPINO95295 136 aa13.25□□□□□ -0.29
CLCF1-201ENST00000312438 STAG3L2P0CL84 134 aa13.25□□□□□ -0.29
CLCF1-201ENST00000312438 STAG3L3P0CL85 134 aa13.25□□□□□ -0.29
CLCF1-201ENST00000312438 PSMB3P49720 205 aa13.25□□□□□ -0.29
CLCF1-201ENST00000312438 SELENOTP62341 195 aa13.25□□□□□ -0.29
CLCF1-201ENST00000312438 SOHLH1Q5JUK2 328 aa13.25□□□□□ -0.29
CLCF1-201ENST00000312438 ATRAIDQ6UW56 229 aa13.25□□□□□ -0.29
CLCF1-201ENST00000312438 PRSS57Q6UWY2 283 aa13.25□□□□□ -0.29
CLCF1-201ENST00000312438 TTC9CQ8N5M4 171 aa13.25□□□□□ -0.29
CLCF1-201ENST00000312438 TMPRSS5Q9H3S3 457 aa13.25□□□□□ -0.29
CLCF1-201ENST00000312438 SEPSECSQ9HD40 501 aaKnown RBP13.25□□□□□ -0.29
CLCF1-201ENST00000312438 IGKV1D-37A0A075B6S9 117 aa13.24□□□□□ -0.29
CLCF1-201ENST00000312438 RNF223E7ERA6 249 aa13.24□□□□□ -0.29
CLCF1-201ENST00000312438 GATA2P23769 480 aaPredicted RBP13.24□□□□□ -0.29
CLCF1-201ENST00000312438 NKX6-2Q9C056 277 aaPredicted RBP13.24□□□□□ -0.29
CLCF1-201ENST00000312438 MANBALQ9NQG1 85 aa13.24□□□□□ -0.29
CLCF1-201ENST00000312438 MRPL36Q9P0J6 103 aaKnown RBP13.24□□□□□ -0.29
CLCF1-201ENST00000312438 WNK2Q9Y3S1 2297 aa13.23□□□□□ -0.29
CLCF1-201ENST00000312438 I3L2K1 104 aa13.23□□□□□ -0.29
CLCF1-201ENST00000312438 CXorf1O96002 111 aa13.23□□□□□ -0.29
CLCF1-201ENST00000312438 TGFAP01135 160 aa13.23□□□□□ -0.29
CLCF1-201ENST00000312438 AVPP01185 164 aa13.23□□□□□ -0.29
CLCF1-201ENST00000312438 Q5PR19 223 aa13.23□□□□□ -0.29
CLCF1-201ENST00000312438 NANPQ8TBE9 248 aa13.23□□□□□ -0.29
CLCF1-201ENST00000312438 PIFOQ8TCI5 191 aa13.23□□□□□ -0.29
CLCF1-201ENST00000312438 UTP20O75691 2785 aaKnown RBP13.23□□□□□ -0.29
CLCF1-201ENST00000312438 TACC2O95359 2948 aa13.23□□□□□ -0.29
CLCF1-201ENST00000312438 NDPQ00604 133 aa13.23□□□□□ -0.29
CLCF1-201ENST00000312438 KLF17Q5JT82 389 aaPredicted RBP13.23□□□□□ -0.29
CLCF1-201ENST00000312438 ASPHD1Q5U4P2 390 aa13.23□□□□□ -0.29
CLCF1-201ENST00000312438 FAM78BQ5VT40 261 aa13.23□□□□□ -0.29
CLCF1-201ENST00000312438 IQCF2Q8IXL9 164 aa13.23□□□□□ -0.29
CLCF1-201ENST00000312438 GATAD1Q8WUU5 269 aa13.23□□□□□ -0.29
CLCF1-201ENST00000312438 RBM14Q96PK6 669 aaKnown RBP13.23□□□□□ -0.29
CLCF1-201ENST00000312438 TRGV9Q99603 122 aa13.23□□□□□ -0.29
CLCF1-201ENST00000312438 TNFRSF19Q9NS68 423 aa13.23□□□□□ -0.29
CLCF1-201ENST00000312438 FBP1P09467 338 aa13.22□□□□□ -0.29
CLCF1-201ENST00000312438 EGR2P11161 476 aaPredicted RBP13.22□□□□□ -0.29
CLCF1-201ENST00000312438 BPIFB3P59826 476 aa13.22□□□□□ -0.29
CLCF1-201ENST00000312438 ZNF90Q03938 601 aa13.22□□□□□ -0.29
CLCF1-201ENST00000312438 OR4X1Q8NH49 305 aa13.22□□□□□ -0.29
CLCF1-201ENST00000312438 RNF2Q99496 336 aa13.22□□□□□ -0.29
CLCF1-201ENST00000312438 SSX3Q99909 188 aa13.22□□□□□ -0.29
CLCF1-201ENST00000312438 FUT9Q9Y231 359 aa13.22□□□□□ -0.29
CLCF1-201ENST00000312438 IGHV3-21A0A0B4J1V1 117 aa13.21□□□□□ -0.29
CLCF1-201ENST00000312438 NDUFS6O75380 124 aaKnown RBP13.21□□□□□ -0.29
CLCF1-201ENST00000312438 BTN1A1Q13410 526 aa13.21□□□□□ -0.29
CLCF1-201ENST00000312438 DNAJC4Q9NNZ3 241 aa13.21□□□□□ -0.29
CLCF1-201ENST00000312438 CHD6Q8TD26 2715 aa13.21□□□□□ -0.29
CLCF1-201ENST00000312438 OR5G3P0C626 314 aa13.2□□□□□ -0.3
CLCF1-201ENST00000312438 MEF2BQ02080 365 aaPredicted RBP13.2□□□□□ -0.3
CLCF1-201ENST00000312438 SPNS3Q6ZMD2 512 aa13.2□□□□□ -0.3
CLCF1-201ENST00000312438 C5orf56Q8N8D9 126 aa13.2□□□□□ -0.3
CLCF1-201ENST00000312438 CYB561D1Q8N8Q1 229 aa13.2□□□□□ -0.3
CLCF1-201ENST00000312438 CLRN3Q8NCR9 226 aa13.2□□□□□ -0.3
CLCF1-201ENST00000312438 MAPK1IP1LQ8NDC0 245 aa13.2□□□□□ -0.3
CLCF1-201ENST00000312438 OR1L4Q8NGR5 311 aa13.2□□□□□ -0.3
CLCF1-201ENST00000312438 SGMS2Q8NHU3 365 aa13.2□□□□□ -0.3
CLCF1-201ENST00000312438 TMEM37Q8WXS4 190 aa13.2□□□□□ -0.3
CLCF1-201ENST00000312438 THYN1Q9P016 225 aa13.2□□□□□ -0.3
CLCF1-201ENST00000312438 MOB4Q9Y3A3 225 aa13.2□□□□□ -0.3
CLCF1-201ENST00000312438 USP9YO00507 2555 aaPredicted RBP13.2□□□□□ -0.3
CLCF1-201ENST00000312438 K7EIM0 57 aa13.2□□□□□ -0.3
CLCF1-201ENST00000312438 ARL14EPLP0DKL9 152 aa13.2□□□□□ -0.3
CLCF1-201ENST00000312438 CEBPGP53567 150 aa13.2□□□□□ -0.3
CLCF1-201ENST00000312438 SPATA31B1PQ5VZV4 182 aa13.2□□□□□ -0.3
CLCF1-201ENST00000312438 TMEM68Q96MH6 324 aa13.2□□□□□ -0.3
CLCF1-201ENST00000312438 PFDN5Q99471 154 aa13.2□□□□□ -0.3
CLCF1-201ENST00000312438 HSPB9Q9BQS6 159 aa13.2□□□□□ -0.3
CLCF1-201ENST00000312438 TECRQ9NZ01 308 aaKnown RBP13.2□□□□□ -0.3
CLCF1-201ENST00000312438 FBN2P35556 2912 aa13.19□□□□□ -0.3
CLCF1-201ENST00000312438 PLXNB1O43157 2135 aa13.19□□□□□ -0.3
CLCF1-201ENST00000312438 IGLV11-55A0A075B6I3 123 aa13.19□□□□□ -0.3
CLCF1-201ENST00000312438 PSMB11A5LHX3 300 aa13.19□□□□□ -0.3
CLCF1-201ENST00000312438 PAGE4O60829 102 aa13.19□□□□□ -0.3
CLCF1-201ENST00000312438 IGHV4-31P0DP07 118 aa13.19□□□□□ -0.3
CLCF1-201ENST00000312438 TAS2R45P59539 299 aa13.19□□□□□ -0.3
CLCF1-201ENST00000312438 MIR17HGQ75NE6 70 aa13.19□□□□□ -0.3
CLCF1-201ENST00000312438 Q96MF0 132 aa13.19□□□□□ -0.3
CLCF1-201ENST00000312438 FANCD2OSQ96PS1 177 aa13.19□□□□□ -0.3
CLCF1-201ENST00000312438 MRPL32Q9BYC8 188 aaKnown RBP13.19□□□□□ -0.3
CLCF1-201ENST00000312438 ELOA3CA0A087WX78 387 aaPredicted RBP13.18□□□□□ -0.3
CLCF1-201ENST00000312438 NPBWR1P48145 328 aa13.18□□□□□ -0.3
CLCF1-201ENST00000312438 CD81P60033 236 aa13.18□□□□□ -0.3
CLCF1-201ENST00000312438 HIST2H2BCQ6DN03 193 aa13.18□□□□□ -0.3
CLCF1-201ENST00000312438 OR5T1Q8NG75 326 aa13.18□□□□□ -0.3
CLCF1-201ENST00000312438 SOX21Q9Y651 276 aaPredicted RBP13.18□□□□□ -0.3
CLCF1-201ENST00000312438 ASH1LQ9NR48 2969 aaKnown RBP13.18□□□□□ -0.3
CLCF1-201ENST00000312438 ABCA2Q9BZC7 2435 aa13.18□□□□□ -0.3
CLCF1-201ENST00000312438 COX7A2P2O60397 106 aa13.18□□□□□ -0.3
CLCF1-201ENST00000312438 CLN5O75503 358 aa13.18□□□□□ -0.3
CLCF1-201ENST00000312438 IGLC1P0CG04 106 aa13.18□□□□□ -0.3
CLCF1-201ENST00000312438 GCHFRP30047 84 aa13.18□□□□□ -0.3
CLCF1-201ENST00000312438 TMEM219Q86XT9 240 aa13.18□□□□□ -0.3
CLCF1-201ENST00000312438 TXNDC17Q9BRA2 123 aa13.18□□□□□ -0.3
CLCF1-201ENST00000312438 TMEM250H0YL14 139 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms