RNA–Protein interactions for RNA: ENST00000310190.8

CCS-201, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5 BASIC

Gene CCS, Length 942 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-201ENST00000310190 ZC4H2Q9NQZ6 224 aa13.52□□□□□ -0.25
CCS-201ENST00000310190 LSM4Q9Y4Z0 139 aaKnown RBP13.52□□□□□ -0.25
CCS-201ENST00000310190 DNAH9Q9NYC9 4486 aa13.51□□□□□ -0.25
CCS-201ENST00000310190 RPS10-NUDT3A0A1W2PQS6 291 aa13.51□□□□□ -0.25
CCS-201ENST00000310190 WI2-2373I1.2A0A1W2PRP0 233 aa13.51□□□□□ -0.25
CCS-201ENST00000310190 IFNA21P01568 189 aa13.51□□□□□ -0.25
CCS-201ENST00000310190 HOXB5P09067 269 aa13.51□□□□□ -0.25
CCS-201ENST00000310190 SLC25A4P12235 298 aa13.51□□□□□ -0.25
CCS-201ENST00000310190 NPY1RP25929 384 aa13.51□□□□□ -0.25
CCS-201ENST00000310190 RELQ04864 619 aaPredicted RBP13.51□□□□□ -0.25
CCS-201ENST00000310190 OR4D5Q8NGN0 318 aa13.51□□□□□ -0.25
CCS-201ENST00000310190 ZNF431Q8TF32 576 aaPredicted RBP13.51□□□□□ -0.25
CCS-201ENST00000310190 OR10C1Q96KK4 312 aa13.51□□□□□ -0.25
CCS-201ENST00000310190 UFC1Q9Y3C8 167 aa13.51□□□□□ -0.25
CCS-201ENST00000310190 C15orf62A8K5M9 175 aa13.5□□□□□ -0.25
CCS-201ENST00000310190 NUPL2O15504 423 aaKnown RBP13.5□□□□□ -0.25
CCS-201ENST00000310190 TMEM50AO95807 157 aa13.5□□□□□ -0.25
CCS-201ENST00000310190 CBLN1P23435 193 aa13.5□□□□□ -0.25
CCS-201ENST00000310190 ETFRF1Q6IPR1 90 aa13.5□□□□□ -0.25
CCS-201ENST00000310190 MRPL27Q9P0M9 148 aaKnown RBP13.5□□□□□ -0.25
CCS-201ENST00000310190 TRAV30A0A087WSZ9 112 aa13.49□□□□□ -0.25
CCS-201ENST00000310190 SYNGR2O43760 224 aa13.49□□□□□ -0.25
CCS-201ENST00000310190 CLN5O75503 358 aa13.49□□□□□ -0.25
CCS-201ENST00000310190 ADAP1O75689 374 aa13.49□□□□□ -0.25
CCS-201ENST00000310190 FOLR2P14207 255 aa13.49□□□□□ -0.25
CCS-201ENST00000310190 GPX4P36969 197 aaPredicted RBP13.49□□□□□ -0.25
CCS-201ENST00000310190 DEFB114Q30KQ6 69 aa13.49□□□□□ -0.25
CCS-201ENST00000310190 Q56UQ5 140 aa13.49□□□□□ -0.25
CCS-201ENST00000310190 UNQ9165/PRO28630Q6UXU0 137 aa13.49□□□□□ -0.25
CCS-201ENST00000310190 CACNG8Q8WXS5 425 aa13.49□□□□□ -0.25
CCS-201ENST00000310190 MARVELD1Q9BSK0 173 aa13.49□□□□□ -0.25
CCS-201ENST00000310190 DAZ1Q9NQZ3 744 aaKnown RBP13.49□□□□□ -0.25
CCS-201ENST00000310190 TRAV6A0A075B6T7 132 aa13.48□□□□□ -0.25
CCS-201ENST00000310190 IGHV3-21A0A0B4J1V1 117 aa13.48□□□□□ -0.25
CCS-201ENST00000310190 GNG7O60262 68 aa13.48□□□□□ -0.25
CCS-201ENST00000310190 PRB2P02812 416 aaPredicted RBP13.48□□□□□ -0.25
CCS-201ENST00000310190 SPNP16150 400 aa13.48□□□□□ -0.25
CCS-201ENST00000310190 DEFA1P59665 94 aa13.48□□□□□ -0.25
CCS-201ENST00000310190 DEFA3P59666 94 aa13.48□□□□□ -0.25
CCS-201ENST00000310190 LCN12Q6JVE5 192 aa13.48□□□□□ -0.25
CCS-201ENST00000310190 MRAPQ8TCY5 172 aa13.48□□□□□ -0.25
CCS-201ENST00000310190 PINX1Q96BK5 328 aaKnown RBP13.48□□□□□ -0.25
CCS-201ENST00000310190 TRAV25A0A0B4J276 109 aa13.47□□□□□ -0.25
CCS-201ENST00000310190 PRAF2O60831 178 aa13.47□□□□□ -0.25
CCS-201ENST00000310190 GP9P14770 177 aa13.47□□□□□ -0.25
CCS-201ENST00000310190 OPRK1P41145 380 aa13.47□□□□□ -0.25
CCS-201ENST00000310190 CD69Q07108 199 aa13.47□□□□□ -0.25
CCS-201ENST00000310190 PRSS54Q6PEW0 395 aa13.47□□□□□ -0.25
CCS-201ENST00000310190 ZNF600Q6ZNG1 722 aa13.47□□□□□ -0.25
CCS-201ENST00000310190 NRARPQ7Z6K4 114 aa13.47□□□□□ -0.25
CCS-201ENST00000310190 OR52B4Q8NGK2 314 aa13.47□□□□□ -0.25
CCS-201ENST00000310190 ENKURQ8TC29 256 aa13.47□□□□□ -0.25
CCS-201ENST00000310190 MPTX1A8MV57 137 aa13.46□□□□□ -0.25
CCS-201ENST00000310190 SNRPGP15A8MWD9 76 aa13.46□□□□□ -0.25
CCS-201ENST00000310190 A8MZ25 164 aa13.46□□□□□ -0.25
CCS-201ENST00000310190 SCGB2A1O75556 95 aa13.46□□□□□ -0.25
CCS-201ENST00000310190 IFNA10P01566 189 aa13.46□□□□□ -0.25
CCS-201ENST00000310190 IGKV1-17P01599 117 aa13.46□□□□□ -0.25
CCS-201ENST00000310190 TAS2R30P59541 319 aa13.46□□□□□ -0.25
CCS-201ENST00000310190 RPP30P78346 268 aaKnown RBP13.46□□□□□ -0.25
CCS-201ENST00000310190 C12orf45Q8N5I9 185 aaPredicted RBP13.46□□□□□ -0.25
CCS-201ENST00000310190 ZBTB8BQ8NAP8 495 aaPredicted RBP13.46□□□□□ -0.25
CCS-201ENST00000310190 MRPL36Q9P0J6 103 aaKnown RBP13.46□□□□□ -0.25
CCS-201ENST00000310190 ZNF320A2RRD8 509 aa13.45□□□□□ -0.26
CCS-201ENST00000310190 PRSS46E5RG02 174 aa13.45□□□□□ -0.26
CCS-201ENST00000310190 NKX2-1P43699 371 aaPredicted RBP13.45□□□□□ -0.26
CCS-201ENST00000310190 YPEL3P61236 119 aaPredicted RBP13.45□□□□□ -0.26
CCS-201ENST00000310190 RAB11AP62491 216 aa13.45□□□□□ -0.26
CCS-201ENST00000310190 MLANAQ16655 118 aa13.45□□□□□ -0.26
CCS-201ENST00000310190 TM4SF20Q53R12 229 aa13.45□□□□□ -0.26
CCS-201ENST00000310190 Q8N1Y9 231 aa13.45□□□□□ -0.26
CCS-201ENST00000310190 UBAC2Q8NBM4 344 aa13.45□□□□□ -0.26
CCS-201ENST00000310190 SMIM8Q96KF7 97 aa13.45□□□□□ -0.26
CCS-201ENST00000310190 SEC22CQ9BRL7 303 aa13.45□□□□□ -0.26
CCS-201ENST00000310190 ZNF785A8K8V0 405 aa13.44□□□□□ -0.26
CCS-201ENST00000310190 NXPH3O95157 252 aa13.44□□□□□ -0.26
CCS-201ENST00000310190 IGLC1P0CG04 106 aa13.44□□□□□ -0.26
CCS-201ENST00000310190 IL15RAQ13261 267 aa13.44□□□□□ -0.26
CCS-201ENST00000310190 IAH1Q2TAA2 248 aaPredicted RBP13.44□□□□□ -0.26
CCS-201ENST00000310190 CD300EQ496F6 205 aaPredicted RBP13.44□□□□□ -0.26
CCS-201ENST00000310190 UXS1Q8NBZ7 420 aa13.44□□□□□ -0.26
CCS-201ENST00000310190 OR1S2Q8NGQ3 325 aa13.44□□□□□ -0.26
CCS-201ENST00000310190 PRR25Q96S07 402 aa13.44□□□□□ -0.26
CCS-201ENST00000310190 ZFAND3Q9H8U3 227 aa13.44□□□□□ -0.26
CCS-201ENST00000310190 IGHV3-48P01763 117 aa13.43□□□□□ -0.26
CCS-201ENST00000310190 C11orf87Q6NUJ2 197 aa13.43□□□□□ -0.26
CCS-201ENST00000310190 TOMM20LQ6UXN7 152 aa13.43□□□□□ -0.26
CCS-201ENST00000310190 RAB40CQ96S21 281 aa13.43□□□□□ -0.26
CCS-201ENST00000310190 GPN1Q9HCN4 374 aaPredicted RBP13.43□□□□□ -0.26
CCS-201ENST00000310190 MLXQ9UH92 298 aa13.43□□□□□ -0.26
CCS-201ENST00000310190 SMPXQ9UHP9 88 aa13.43□□□□□ -0.26
CCS-201ENST00000310190 IGHV3-35A0A0C4DH35 117 aa13.42□□□□□ -0.26
CCS-201ENST00000310190 INMT-MINDY4F8WBC2 141 aa13.42□□□□□ -0.26
CCS-201ENST00000310190 SCAF4O95104 1147 aaKnown RBP13.42□□□□□ -0.26
CCS-201ENST00000310190 CD5P06127 495 aa13.42□□□□□ -0.26
CCS-201ENST00000310190 PAX9P55771 341 aa13.42□□□□□ -0.26
CCS-201ENST00000310190 SLC16A13Q7RTY0 426 aa13.42□□□□□ -0.26
CCS-201ENST00000310190 DYNLRB2Q8TF09 96 aa13.42□□□□□ -0.26
CCS-201ENST00000310190 B9D2Q9BPU9 175 aa13.42□□□□□ -0.26
CCS-201ENST00000310190 GINS3Q9BRX5 216 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms