RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 MORN5Q5VZ52 161 aa11.98□□□□□ -0.49
PTPN9-201ENST00000306726 SLC35E4Q6ICL7 350 aa11.98□□□□□ -0.49
PTPN9-201ENST00000306726 SLC45A2Q9UMX9 530 aa11.98□□□□□ -0.49
PTPN9-201ENST00000306726 C3orf79P0CE67 100 aa11.98□□□□□ -0.49
PTPN9-201ENST00000306726 SAP30LQ9HAJ7 183 aa11.98□□□□□ -0.49
PTPN9-201ENST00000306726 PTPN13Q12923 2485 aa11.97□□□□□ -0.49
PTPN9-201ENST00000306726 COX7A1P24310 79 aa11.97□□□□□ -0.49
PTPN9-201ENST00000306726 Q6ZS92 163 aa11.97□□□□□ -0.49
PTPN9-201ENST00000306726 hDV102S1A0JD36 115 aa11.97□□□□□ -0.49
PTPN9-201ENST00000306726 PGPA6NDG6 321 aa11.97□□□□□ -0.49
PTPN9-201ENST00000306726 FAM90A26D6RGX4 464 aa11.97□□□□□ -0.49
PTPN9-201ENST00000306726 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.97□□□□□ -0.49
PTPN9-201ENST00000306726 CHEK1O14757 476 aa11.97□□□□□ -0.49
PTPN9-201ENST00000306726 SLC25A17O43808 307 aa11.97□□□□□ -0.49
PTPN9-201ENST00000306726 VENTXO95231 258 aa11.97□□□□□ -0.49
PTPN9-201ENST00000306726 PROCRQ9UNN8 238 aa11.97□□□□□ -0.49
PTPN9-201ENST00000306726 PROP1O75360 226 aa11.97□□□□□ -0.49
PTPN9-201ENST00000306726 LCN2P80188 198 aa11.97□□□□□ -0.49
PTPN9-201ENST00000306726 SSBP2P81877 361 aaPredicted RBP11.97□□□□□ -0.49
PTPN9-201ENST00000306726 GABRA6Q16445 453 aa11.97□□□□□ -0.49
PTPN9-201ENST00000306726 TNXAQ16473 311 aa11.97□□□□□ -0.49
PTPN9-201ENST00000306726 Q8TCH9 128 aa11.97□□□□□ -0.49
PTPN9-201ENST00000306726 RBP4P02753 201 aa11.96□□□□□ -0.49
PTPN9-201ENST00000306726 STAG3L2P0CL84 134 aa11.96□□□□□ -0.49
PTPN9-201ENST00000306726 STAG3L3P0CL85 134 aa11.96□□□□□ -0.49
PTPN9-201ENST00000306726 AMMECR1Q9Y4X0 333 aaPredicted RBP11.96□□□□□ -0.49
PTPN9-201ENST00000306726 LYZP61626 148 aa11.96□□□□□ -0.49
PTPN9-201ENST00000306726 TNFAIP6P98066 277 aaPredicted RBP11.96□□□□□ -0.49
PTPN9-201ENST00000306726 HES4Q9HCC6 221 aa11.96□□□□□ -0.49
PTPN9-201ENST00000306726 WNT2P09544 360 aa11.96□□□□□ -0.5
PTPN9-201ENST00000306726 HSPE1P61604 102 aaKnown RBP11.96□□□□□ -0.5
PTPN9-201ENST00000306726 OR1L4Q8NGR5 311 aa11.96□□□□□ -0.5
PTPN9-201ENST00000306726 RAB37Q96AX2 223 aa11.96□□□□□ -0.5
PTPN9-201ENST00000306726 TMEM45BQ96B21 275 aa11.96□□□□□ -0.5
PTPN9-201ENST00000306726 RPL15P61313 204 aaKnown RBP11.95□□□□□ -0.5
PTPN9-201ENST00000306726 FAM27E3Q08E93 113 aa11.95□□□□□ -0.5
PTPN9-201ENST00000306726 SLAQ13239 276 aa11.95□□□□□ -0.5
PTPN9-201ENST00000306726 ZNF146Q15072 292 aa11.95□□□□□ -0.5
PTPN9-201ENST00000306726 LINC00596Q86U02 117 aa11.95□□□□□ -0.5
PTPN9-201ENST00000306726 RBM14Q96PK6 669 aaKnown RBP11.95□□□□□ -0.5
PTPN9-201ENST00000306726 LAMTOR2Q9Y2Q5 125 aa11.95□□□□□ -0.5
PTPN9-201ENST00000306726 CBY1Q9Y3M2 126 aa11.95□□□□□ -0.5
PTPN9-201ENST00000306726 TIMM9Q9Y5J7 89 aa11.95□□□□□ -0.5
PTPN9-201ENST00000306726 IGKV1D-17A0A075B6S4 117 aa11.95□□□□□ -0.5
PTPN9-201ENST00000306726 hADV38S2A0JD32 116 aa11.95□□□□□ -0.5
PTPN9-201ENST00000306726 HSBP1L1C9JCN9 74 aa11.95□□□□□ -0.5
PTPN9-201ENST00000306726 CT45A1Q5HYN5 189 aa11.95□□□□□ -0.5
PTPN9-201ENST00000306726 C1orf229Q6ZS94 237 aaPredicted RBP11.95□□□□□ -0.5
PTPN9-201ENST00000306726 CT45A3Q8NHU0 189 aa11.95□□□□□ -0.5
PTPN9-201ENST00000306726 LINC00470Q9BZP3 86 aa11.95□□□□□ -0.5
PTPN9-201ENST00000306726 ZZEF1O43149 2961 aa11.95□□□□□ -0.5
PTPN9-201ENST00000306726 BMPR1BO00238 502 aa11.95□□□□□ -0.5
PTPN9-201ENST00000306726 TAS2R45P59539 299 aa11.95□□□□□ -0.5
PTPN9-201ENST00000306726 RTL8BQ17RB0 113 aa11.95□□□□□ -0.5
PTPN9-201ENST00000306726 CORO2AQ92828 525 aa11.95□□□□□ -0.5
PTPN9-201ENST00000306726 HIGD1CA8MV81 97 aa11.94□□□□□ -0.5
PTPN9-201ENST00000306726 ERHP84090 104 aaKnown RBP11.94□□□□□ -0.5
PTPN9-201ENST00000306726 DIAPH2-AS1Q14236 149 aa11.94□□□□□ -0.5
PTPN9-201ENST00000306726 PRORYQ9H606 182 aa11.94□□□□□ -0.5
PTPN9-201ENST00000306726 KLF3P57682 345 aaPredicted RBP11.94□□□□□ -0.5
PTPN9-201ENST00000306726 PAFAH1B2P68402 229 aa11.94□□□□□ -0.5
PTPN9-201ENST00000306726 PRNTQ86SH4 94 aa11.94□□□□□ -0.5
PTPN9-201ENST00000306726 OR8A1Q8NGG7 326 aa11.94□□□□□ -0.5
PTPN9-201ENST00000306726 PAXXQ9BUH6 204 aa11.94□□□□□ -0.5
PTPN9-201ENST00000306726 CLEC7AQ9BXN2 247 aa11.94□□□□□ -0.5
PTPN9-201ENST00000306726 GP6Q9HCN6 339 aa11.94□□□□□ -0.5
PTPN9-201ENST00000306726 CDC42EP3Q9UKI2 254 aa11.94□□□□□ -0.5
PTPN9-201ENST00000306726 CACNA1AO00555 2505 aa11.94□□□□□ -0.5
PTPN9-201ENST00000306726 ISLRO14498 428 aa11.94□□□□□ -0.5
PTPN9-201ENST00000306726 TNFSF13O75888 250 aa11.94□□□□□ -0.5
PTPN9-201ENST00000306726 NUDT3O95989 172 aa11.94□□□□□ -0.5
PTPN9-201ENST00000306726 OR52E5Q8NH55 327 aa11.94□□□□□ -0.5
PTPN9-201ENST00000306726 MBNL3Q9NUK0 354 aaKnown RBP11.94□□□□□ -0.5
PTPN9-201ENST00000306726 IGKV3D-15A0A087WSY6 115 aa11.93□□□□□ -0.5
PTPN9-201ENST00000306726 A0A1W2PS18 150 aa11.93□□□□□ -0.5
PTPN9-201ENST00000306726 PMS2P5A8MQ11 134 aa11.93□□□□□ -0.5
PTPN9-201ENST00000306726 GPX1P07203 203 aa11.93□□□□□ -0.5
PTPN9-201ENST00000306726 GMPPAQ96IJ6 420 aaPredicted RBP11.93□□□□□ -0.5
PTPN9-201ENST00000306726 AP1S3Q96PC3 154 aa11.93□□□□□ -0.5
PTPN9-201ENST00000306726 TP53TG3Q9ULZ0 132 aa11.93□□□□□ -0.5
PTPN9-201ENST00000306726 ADH4P08319 380 aa11.93□□□□□ -0.5
PTPN9-201ENST00000306726 TPTE2P1Q5T6R2 138 aa11.93□□□□□ -0.5
PTPN9-201ENST00000306726 TCTEX1D1Q8N7M0 179 aa11.93□□□□□ -0.5
PTPN9-201ENST00000306726 OR8B3Q8NGG8 313 aa11.93□□□□□ -0.5
PTPN9-201ENST00000306726 RNASEH2CQ8TDP1 164 aaKnown RBP11.93□□□□□ -0.5
PTPN9-201ENST00000306726 KCNS1Q96KK3 526 aa11.93□□□□□ -0.5
PTPN9-201ENST00000306726 BET1LQ9NYM9 111 aa11.93□□□□□ -0.5
PTPN9-201ENST00000306726 GGTLC3B5MD39 225 aa11.93□□□□□ -0.5
PTPN9-201ENST00000306726 CNIH1O95406 144 aa11.93□□□□□ -0.5
PTPN9-201ENST00000306726 CA7P43166 264 aa11.93□□□□□ -0.5
PTPN9-201ENST00000306726 BEND2Q8NDZ0 799 aa11.93□□□□□ -0.5
PTPN9-201ENST00000306726 DEFB104AQ8WTQ1 72 aa11.93□□□□□ -0.5
PTPN9-201ENST00000306726 LYNX1G3V0Z9 82 aa11.92□□□□□ -0.5
PTPN9-201ENST00000306726 LYNX1P0DP58 116 aa11.92□□□□□ -0.5
PTPN9-201ENST00000306726 LBHQ53QV2 105 aaPredicted RBP11.92□□□□□ -0.5
PTPN9-201ENST00000306726 C10orf113Q5VZT2 155 aa11.92□□□□□ -0.5
PTPN9-201ENST00000306726 Q6ZS49 121 aa11.92□□□□□ -0.5
PTPN9-201ENST00000306726 LINC00173Q6ZV60 143 aa11.92□□□□□ -0.5
PTPN9-201ENST00000306726 GCSAMQ8N6F7 178 aa11.92□□□□□ -0.5
PTPN9-201ENST00000306726 MGST3O14880 152 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms