RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 ACY3Q96HD9 319 aa5.23□□□□□ -1.57
USP47-201ENST00000305481 SMIM7Q9BQ49 75 aa5.23□□□□□ -1.57
USP47-201ENST00000305481 PARLQ9H300 379 aa5.23□□□□□ -1.57
USP47-201ENST00000305481 CELSR1Q9NYQ6 3014 aa5.23□□□□□ -1.57
USP47-201ENST00000305481 CELSR2Q9HCU4 2923 aa5.23□□□□□ -1.57
USP47-201ENST00000305481 MYO18BQ8IUG5 2567 aa5.23□□□□□ -1.57
USP47-201ENST00000305481 PSMB11A5LHX3 300 aa5.22□□□□□ -1.57
USP47-201ENST00000305481 ACTL6BO94805 426 aa5.22□□□□□ -1.57
USP47-201ENST00000305481 RPL27AP46776 148 aaKnown RBP5.22□□□□□ -1.57
USP47-201ENST00000305481 LMO4P61968 165 aa5.22□□□□□ -1.57
USP47-201ENST00000305481 RHOBP62745 196 aa5.22□□□□□ -1.57
USP47-201ENST00000305481 GNB1P62873 340 aa5.22□□□□□ -1.57
USP47-201ENST00000305481 KIAA0141Q14154 515 aaPredicted RBP5.22□□□□□ -1.57
USP47-201ENST00000305481 ZNF674Q2M3X9 581 aa5.22□□□□□ -1.57
USP47-201ENST00000305481 NPIPB3Q92617 1050 aa5.22□□□□□ -1.57
USP47-201ENST00000305481 ZNF503Q96F45 646 aa5.22□□□□□ -1.57
USP47-201ENST00000305481 SLC35E1Q96K37 410 aa5.22□□□□□ -1.57
USP47-201ENST00000305481 BPESC1Q9GZL8 116 aa5.22□□□□□ -1.57
USP47-201ENST00000305481 SIRPDQ9H106 197 aa5.22□□□□□ -1.57
USP47-201ENST00000305481 PPP1R14DQ9NXH3 145 aa5.22□□□□□ -1.57
USP47-201ENST00000305481 YTHDF2Q9Y5A9 579 aaKnown RBP5.22□□□□□ -1.57
USP47-201ENST00000305481 CRYGCP07315 174 aa5.22□□□□□ -1.57
USP47-201ENST00000305481 RAB5AP20339 215 aa5.22□□□□□ -1.57
USP47-201ENST00000305481 GCHFRP30047 84 aa5.22□□□□□ -1.57
USP47-201ENST00000305481 ZNF90Q03938 601 aa5.22□□□□□ -1.57
USP47-201ENST00000305481 PNRC1Q12796 327 aaPredicted RBP5.22□□□□□ -1.57
USP47-201ENST00000305481 FAM78BQ5VT40 261 aa5.22□□□□□ -1.57
USP47-201ENST00000305481 CYP2G1PQ6ZSU1 146 aa5.22□□□□□ -1.57
USP47-201ENST00000305481 KIR3DL3Q8N743 410 aa5.22□□□□□ -1.57
USP47-201ENST00000305481 ZNF114Q8NC26 417 aa5.22□□□□□ -1.57
USP47-201ENST00000305481 SSX3Q99909 188 aa5.22□□□□□ -1.57
USP47-201ENST00000305481 RNF5Q99942 180 aa5.22□□□□□ -1.57
USP47-201ENST00000305481 MLXQ9UH92 298 aa5.22□□□□□ -1.57
USP47-201ENST00000305481 FUT9Q9Y231 359 aa5.22□□□□□ -1.57
USP47-201ENST00000305481 WNK2Q9Y3S1 2297 aa5.22□□□□□ -1.57
USP47-201ENST00000305481 B4DEV8 164 aa5.22□□□□□ -1.57
USP47-201ENST00000305481 IGHV4-39P01824 125 aa5.22□□□□□ -1.57
USP47-201ENST00000305481 HOXB4P17483 251 aaPredicted RBP5.22□□□□□ -1.57
USP47-201ENST00000305481 SUB1P53999 127 aaKnown RBP eCLIP5.22□□□□□ -1.57
USP47-201ENST00000305481 FLI1Q01543 452 aaPredicted RBP5.22□□□□□ -1.57
USP47-201ENST00000305481 ELOBQ15370 118 aa5.22□□□□□ -1.57
USP47-201ENST00000305481 TMEM241Q24JQ0 296 aa5.22□□□□□ -1.57
USP47-201ENST00000305481 RNF212Q495C1 297 aa5.22□□□□□ -1.57
USP47-201ENST00000305481 MORN5Q5VZ52 161 aa5.22□□□□□ -1.57
USP47-201ENST00000305481 CST9LP1Q5W188 147 aa5.22□□□□□ -1.57
USP47-201ENST00000305481 ZFP82Q8N141 532 aa5.22□□□□□ -1.57
USP47-201ENST00000305481 Q8WTZ3 238 aa5.22□□□□□ -1.57
USP47-201ENST00000305481 DERL1Q9BUN8 251 aa5.22□□□□□ -1.57
USP47-201ENST00000305481 NAT8Q9UHE5 227 aa5.22□□□□□ -1.57
USP47-201ENST00000305481 GATCO43716 136 aaKnown RBP5.21□□□□□ -1.57
USP47-201ENST00000305481 PRB1P04280 392 aa5.21□□□□□ -1.57
USP47-201ENST00000305481 CXCL1P09341 107 aa5.21□□□□□ -1.57
USP47-201ENST00000305481 RPL23P62829 140 aaKnown RBP5.21□□□□□ -1.57
USP47-201ENST00000305481 SSX2Q16385 188 aa5.21□□□□□ -1.57
USP47-201ENST00000305481 THAP8Q8NA92 274 aa5.21□□□□□ -1.57
USP47-201ENST00000305481 C2CD4CQ8TF44 421 aa5.21□□□□□ -1.57
USP47-201ENST00000305481 AJUBAQ96IF1 538 aa5.21□□□□□ -1.57
USP47-201ENST00000305481 BBC3Q96PG8 261 aaPredicted RBP5.21□□□□□ -1.57
USP47-201ENST00000305481 SLC25A33Q9BSK2 321 aa5.21□□□□□ -1.57
USP47-201ENST00000305481 MAP1AP78559 2803 aaPredicted RBP5.21□□□□□ -1.58
USP47-201ENST00000305481 NDUFB4O95168 129 aa5.21□□□□□ -1.58
USP47-201ENST00000305481 OR5G3P0C626 314 aa5.21□□□□□ -1.58
USP47-201ENST00000305481 CEACAM3P40198 252 aa5.21□□□□□ -1.58
USP47-201ENST00000305481 RND2P52198 227 aa5.21□□□□□ -1.58
USP47-201ENST00000305481 PATE2Q6UY27 113 aa5.21□□□□□ -1.58
USP47-201ENST00000305481 NPBQ8NG41 125 aa5.21□□□□□ -1.58
USP47-201ENST00000305481 SRSF12Q8WXF0 261 aaKnown RBP5.21□□□□□ -1.58
USP47-201ENST00000305481 MISP3Q96FF7 219 aa5.21□□□□□ -1.58
USP47-201ENST00000305481 EAF1Q96JC9 268 aaPredicted RBP5.21□□□□□ -1.58
USP47-201ENST00000305481 TMEM242Q9NWH2 141 aa5.21□□□□□ -1.58
USP47-201ENST00000305481 URGCP-MRPS24S4R325 110 aa5.21□□□□□ -1.58
USP47-201ENST00000305481 ZNF462Q96JM2 2506 aa5.21□□□□□ -1.58
USP47-201ENST00000305481 ABCA1O95477 2261 aa5.21□□□□□ -1.58
USP47-201ENST00000305481 IGHV2-70DA0A0C4DH43 119 aa5.21□□□□□ -1.58
USP47-201ENST00000305481 CXorf65A6NEN9 183 aa5.21□□□□□ -1.58
USP47-201ENST00000305481 PDE6DO43924 150 aa5.21□□□□□ -1.58
USP47-201ENST00000305481 NDUFA3O95167 84 aa5.21□□□□□ -1.58
USP47-201ENST00000305481 MMDQ15546 238 aa5.21□□□□□ -1.58
USP47-201ENST00000305481 OR1P1Q8NH06 330 aa5.21□□□□□ -1.58
USP47-201ENST00000305481 TBX15Q96SF7 602 aa5.21□□□□□ -1.58
USP47-201ENST00000305481 F11RQ9Y624 299 aaKnown RBP5.21□□□□□ -1.58
USP47-201ENST00000305481 TRBV20OR9-2A0A075B6H5 130 aa5.2□□□□□ -1.58
USP47-201ENST00000305481 TGIF2-C20orf24A0A0A6YYL0 155 aa5.2□□□□□ -1.58
USP47-201ENST00000305481 IGHV3-21A0A0B4J1V1 117 aa5.2□□□□□ -1.58
USP47-201ENST00000305481 TRAV5A0A0B4J249 113 aa5.2□□□□□ -1.58
USP47-201ENST00000305481 TCRBV4S1A1TA0A5B7 111 aa5.2□□□□□ -1.58
USP47-201ENST00000305481 NBR2O15453 112 aa5.2□□□□□ -1.58
USP47-201ENST00000305481 MOSP00540 346 aa5.2□□□□□ -1.58
USP47-201ENST00000305481 ADIRFQ15847 76 aa5.2□□□□□ -1.58
USP47-201ENST00000305481 C9orf152Q5JTZ5 239 aa5.2□□□□□ -1.58
USP47-201ENST00000305481 MALSU1Q96EH3 234 aa5.2□□□□□ -1.58
USP47-201ENST00000305481 FAM167A-AS1Q96KT0 104 aa5.2□□□□□ -1.58
USP47-201ENST00000305481 ABCA2Q9BZC7 2435 aa5.2□□□□□ -1.58
USP47-201ENST00000305481 SCO2A0A1W2PP80 73 aa5.2□□□□□ -1.58
USP47-201ENST00000305481 TMEM116Q8NCL8 245 aa5.2□□□□□ -1.58
USP47-201ENST00000305481 DNAJC4Q9NNZ3 241 aa5.2□□□□□ -1.58
USP47-201ENST00000305481 SPG11Q96JI7 2443 aa5.2□□□□□ -1.58
USP47-201ENST00000305481 PGPEP1LA6NFU8 196 aa5.2□□□□□ -1.58
USP47-201ENST00000305481 TOX4O94842 621 aa5.2□□□□□ -1.58
USP47-201ENST00000305481 PLGLAQ15195 96 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms