RNA–Protein interactions for RNA: ENST00000301717.8

SPSB3-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-201ENST00000301717 ASCL2Q99929 193 aa13.75□□□□□ -0.21
SPSB3-201ENST00000301717 MAGT1Q9H0U3 335 aa13.75□□□□□ -0.21
SPSB3-201ENST00000301717 DUXBA0A1W2PPF3 345 aa13.74□□□□□ -0.21
SPSB3-201ENST00000301717 NUPL2O15504 423 aaKnown RBP13.74□□□□□ -0.21
SPSB3-201ENST00000301717 GNG7O60262 68 aa13.74□□□□□ -0.21
SPSB3-201ENST00000301717 YIF1AO95070 293 aa13.74□□□□□ -0.21
SPSB3-201ENST00000301717 TCRBP04435 133 aa13.74□□□□□ -0.21
SPSB3-201ENST00000301717 HTR2BP41595 481 aa13.74□□□□□ -0.21
SPSB3-201ENST00000301717 IFITM3Q01628 133 aa13.74□□□□□ -0.21
SPSB3-201ENST00000301717 Q8N1Y9 231 aa13.74□□□□□ -0.21
SPSB3-201ENST00000301717 IGHV3-49A0A0A0MS15 119 aa13.73□□□□□ -0.21
SPSB3-201ENST00000301717 ZNF785A8K8V0 405 aa13.73□□□□□ -0.21
SPSB3-201ENST00000301717 NDUFA4O00483 81 aa13.73□□□□□ -0.21
SPSB3-201ENST00000301717 NPY1RP25929 384 aa13.73□□□□□ -0.21
SPSB3-201ENST00000301717 FCGR2BP31994 310 aaPredicted RBP13.73□□□□□ -0.21
SPSB3-201ENST00000301717 CD69Q07108 199 aa13.73□□□□□ -0.21
SPSB3-201ENST00000301717 C2orf83Q53S99 150 aa13.73□□□□□ -0.21
SPSB3-201ENST00000301717 LCN12Q6JVE5 192 aa13.73□□□□□ -0.21
SPSB3-201ENST00000301717 TMEM61Q8N0U2 210 aa13.73□□□□□ -0.21
SPSB3-201ENST00000301717 DUSP18Q8NEJ0 188 aa13.73□□□□□ -0.21
SPSB3-201ENST00000301717 ATP6V0BQ99437 205 aa13.73□□□□□ -0.21
SPSB3-201ENST00000301717 B9D2Q9BPU9 175 aa13.73□□□□□ -0.21
SPSB3-201ENST00000301717 UFC1Q9Y3C8 167 aa13.73□□□□□ -0.21
SPSB3-201ENST00000301717 TMED3Q9Y3Q3 217 aa13.73□□□□□ -0.21
SPSB3-201ENST00000301717 SMAD5-AS1Q9Y6J3 95 aa13.73□□□□□ -0.21
SPSB3-201ENST00000301717 SCAF4O95104 1147 aaKnown RBP13.73□□□□□ -0.21
SPSB3-201ENST00000301717 IFNA10P01566 189 aa13.73□□□□□ -0.21
SPSB3-201ENST00000301717 ZNF846Q147U1 533 aa13.73□□□□□ -0.21
SPSB3-201ENST00000301717 TXN2Q99757 166 aa13.73□□□□□ -0.21
SPSB3-201ENST00000301717 SEC22CQ9BRL7 303 aa13.73□□□□□ -0.21
SPSB3-201ENST00000301717 HIPK2Q9H2X6 1198 aa13.73□□□□□ -0.21
SPSB3-201ENST00000301717 PALMDQ9NP74 551 aa13.73□□□□□ -0.21
SPSB3-201ENST00000301717 NUDT15Q9NV35 164 aa13.73□□□□□ -0.21
SPSB3-201ENST00000301717 IGHV3OR16-13A0A075B7E8 117 aa13.72□□□□□ -0.21
SPSB3-201ENST00000301717 IGHV3-74A0A0B4J1X5 117 aa13.72□□□□□ -0.21
SPSB3-201ENST00000301717 CORTO00230 105 aa13.72□□□□□ -0.21
SPSB3-201ENST00000301717 TMEM50AO95807 157 aa13.72□□□□□ -0.21
SPSB3-201ENST00000301717 CD7P09564 240 aa13.72□□□□□ -0.21
SPSB3-201ENST00000301717 C8orf88P0DMB2 117 aa13.72□□□□□ -0.21
SPSB3-201ENST00000301717 NPBWR1P48145 328 aa13.72□□□□□ -0.21
SPSB3-201ENST00000301717 GUCA2BQ16661 112 aa13.72□□□□□ -0.21
SPSB3-201ENST00000301717 WFDC10AQ9H1F0 79 aa13.72□□□□□ -0.21
SPSB3-201ENST00000301717 UPK1BO75841 260 aa13.71□□□□□ -0.22
SPSB3-201ENST00000301717 TOMM20LQ6UXN7 152 aa13.71□□□□□ -0.22
SPSB3-201ENST00000301717 COQ8AQ8NI60 647 aa13.71□□□□□ -0.22
SPSB3-201ENST00000301717 WDR12Q9GZL7 423 aaKnown RBP13.71□□□□□ -0.22
SPSB3-201ENST00000301717 DAZ1Q9NQZ3 744 aaKnown RBP13.71□□□□□ -0.22
SPSB3-201ENST00000301717 CCSO14618 274 aa13.7□□□□□ -0.22
SPSB3-201ENST00000301717 CLN5O75503 358 aa13.7□□□□□ -0.22
SPSB3-201ENST00000301717 IGHV4-30-4P0DP06 118 aa13.7□□□□□ -0.22
SPSB3-201ENST00000301717 SLC25A6P12236 298 aa13.7□□□□□ -0.22
SPSB3-201ENST00000301717 RND2P52198 227 aa13.7□□□□□ -0.22
SPSB3-201ENST00000301717 RELQ04864 619 aaPredicted RBP13.7□□□□□ -0.22
SPSB3-201ENST00000301717 ASAH1Q13510 395 aa13.7□□□□□ -0.22
SPSB3-201ENST00000301717 TIGITQ495A1 244 aa13.7□□□□□ -0.22
SPSB3-201ENST00000301717 PRSS54Q6PEW0 395 aa13.7□□□□□ -0.22
SPSB3-201ENST00000301717 OR2K2Q8NGT1 345 aa13.7□□□□□ -0.22
SPSB3-201ENST00000301717 OR4X1Q8NH49 305 aa13.7□□□□□ -0.22
SPSB3-201ENST00000301717 RNASEH2CQ8TDP1 164 aaKnown RBP13.7□□□□□ -0.22
SPSB3-201ENST00000301717 GAR1Q9NY12 217 aaKnown RBP13.7□□□□□ -0.22
SPSB3-201ENST00000301717 TECRQ9NZ01 308 aaKnown RBP13.7□□□□□ -0.22
SPSB3-201ENST00000301717 MRPL27Q9P0M9 148 aaKnown RBP13.7□□□□□ -0.22
SPSB3-201ENST00000301717 PUS1Q9Y606 427 aaKnown RBP eCLIP13.7□□□□□ -0.22
SPSB3-201ENST00000301717 HUWE1Q7Z6Z7 4374 aaKnown RBP13.69□□□□□ -0.22
SPSB3-201ENST00000301717 FAM240BA0A1B0GVZ2 78 aa13.69□□□□□ -0.22
SPSB3-201ENST00000301717 WRBO00258 174 aa13.69□□□□□ -0.22
SPSB3-201ENST00000301717 FRMD6-AS1P0C7T7 363 aa13.69□□□□□ -0.22
SPSB3-201ENST00000301717 ELLP55199 621 aaPredicted RBP13.69□□□□□ -0.22
SPSB3-201ENST00000301717 CD81P60033 236 aa13.69□□□□□ -0.22
SPSB3-201ENST00000301717 MITD1Q8WV92 249 aa13.69□□□□□ -0.22
SPSB3-201ENST00000301717 ACY3Q96HD9 319 aa13.69□□□□□ -0.22
SPSB3-201ENST00000301717 OR10C1Q96KK4 312 aa13.69□□□□□ -0.22
SPSB3-201ENST00000301717 PAIP2BQ9ULR5 123 aaKnown RBP13.69□□□□□ -0.22
SPSB3-201ENST00000301717 IGHV3-66A0A0C4DH42 116 aa13.68□□□□□ -0.22
SPSB3-201ENST00000301717 C15orf62A8K5M9 175 aa13.68□□□□□ -0.22
SPSB3-201ENST00000301717 H3BP45 60 aa13.68□□□□□ -0.22
SPSB3-201ENST00000301717 IGKV1-17P01599 117 aa13.68□□□□□ -0.22
SPSB3-201ENST00000301717 APOHP02749 345 aaPredicted RBP13.68□□□□□ -0.22
SPSB3-201ENST00000301717 H2AFB2P0C5Z0 115 aa13.68□□□□□ -0.22
SPSB3-201ENST00000301717 POLR2GP62487 172 aaKnown RBP eCLIP13.68□□□□□ -0.22
SPSB3-201ENST00000301717 DCTN2Q13561 401 aaKnown RBP13.68□□□□□ -0.22
SPSB3-201ENST00000301717 SBSPONQ8IVN8 264 aa13.68□□□□□ -0.22
SPSB3-201ENST00000301717 MARC2Q969Z3 335 aa13.68□□□□□ -0.22
SPSB3-201ENST00000301717 ZFAND3Q9H8U3 227 aa13.68□□□□□ -0.22
SPSB3-201ENST00000301717 CACFD1Q9UGQ2 172 aa13.68□□□□□ -0.22
SPSB3-201ENST00000301717 U3KQ87 197 aa13.68□□□□□ -0.22
SPSB3-201ENST00000301717 PIGBOS1A0A0B4J2F0 54 aa13.67□□□□□ -0.22
SPSB3-201ENST00000301717 RPS10-NUDT3A0A1W2PQS6 291 aa13.67□□□□□ -0.22
SPSB3-201ENST00000301717 SYNGR2O43760 224 aa13.67□□□□□ -0.22
SPSB3-201ENST00000301717 IFNA4P05014 189 aa13.67□□□□□ -0.22
SPSB3-201ENST00000301717 IGLC1P0CG04 106 aa13.67□□□□□ -0.22
SPSB3-201ENST00000301717 SLC16A13Q7RTY0 426 aa13.67□□□□□ -0.22
SPSB3-201ENST00000301717 GTSCR1Q86UQ5 136 aa13.67□□□□□ -0.22
SPSB3-201ENST00000301717 NPIPB3Q92617 1050 aa13.67□□□□□ -0.22
SPSB3-201ENST00000301717 NEURL2Q9BR09 285 aa13.67□□□□□ -0.22
SPSB3-201ENST00000301717 SMPXQ9UHP9 88 aa13.67□□□□□ -0.22
SPSB3-201ENST00000301717 IGHV7-4-1A0A0J9YVY3 117 aa13.66□□□□□ -0.22
SPSB3-201ENST00000301717 FAM90A26D6RGX4 464 aa13.66□□□□□ -0.22
SPSB3-201ENST00000301717 K7EMT4 169 aa13.66□□□□□ -0.22
SPSB3-201ENST00000301717 IFNA21P01568 189 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms