RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 C20orf144Q9BQM9 153 aa17.79■□□□□ 0.44
TPM4-201ENST00000300933 SAMD10Q9BYL1 202 aa17.79■□□□□ 0.44
TPM4-201ENST00000300933 FOXA2Q9Y261 457 aaPredicted RBP17.79■□□□□ 0.44
TPM4-201ENST00000300933 SLC17A3O00476 420 aa17.78■□□□□ 0.44
TPM4-201ENST00000300933 FRMD6-AS1P0C7T7 363 aa17.78■□□□□ 0.44
TPM4-201ENST00000300933 CD99P14209 185 aa17.78■□□□□ 0.44
TPM4-201ENST00000300933 BAGE3Q86Y29 109 aa17.78■□□□□ 0.44
TPM4-201ENST00000300933 BAGE2Q86Y30 109 aa17.78■□□□□ 0.44
TPM4-201ENST00000300933 WNK2Q9Y3S1 2297 aa17.78■□□□□ 0.44
TPM4-201ENST00000300933 C17orf112F2Z3M2 114 aa17.78■□□□□ 0.44
TPM4-201ENST00000300933 RPP30P78346 268 aaKnown RBP17.78■□□□□ 0.44
TPM4-201ENST00000300933 ZNF90Q03938 601 aa17.78■□□□□ 0.44
TPM4-201ENST00000300933 A0A1W2PPV4 95 aa17.77■□□□□ 0.44
TPM4-201ENST00000300933 B9A039 149 aa17.77■□□□□ 0.44
TPM4-201ENST00000300933 PDLIM3Q53GG5 364 aaPredicted RBP17.77■□□□□ 0.44
TPM4-201ENST00000300933 ZNF833PQ6ZTB9 187 aa17.77■□□□□ 0.44
TPM4-201ENST00000300933 TEX50A0A1B0GTY4 177 aa17.77■□□□□ 0.44
TPM4-201ENST00000300933 UPK2O00526 184 aa17.77■□□□□ 0.44
TPM4-201ENST00000300933 TCF21O43680 179 aa17.77■□□□□ 0.44
TPM4-201ENST00000300933 C10orf55Q5SWW7 151 aa17.77■□□□□ 0.44
TPM4-201ENST00000300933 OR5AU1Q8NGC0 362 aa17.77■□□□□ 0.44
TPM4-201ENST00000300933 MRPL18Q9H0U6 180 aaKnown RBP17.77■□□□□ 0.44
TPM4-201ENST00000300933 MAP1AP78559 2803 aaPredicted RBP17.76■□□□□ 0.43
TPM4-201ENST00000300933 SCO2A0A1W2PP80 73 aa17.76■□□□□ 0.43
TPM4-201ENST00000300933 H0YJW9 148 aa17.76■□□□□ 0.43
TPM4-201ENST00000300933 UCNP55089 124 aa17.76■□□□□ 0.43
TPM4-201ENST00000300933 OCC1Q8TAD7 63 aa17.76■□□□□ 0.43
TPM4-201ENST00000300933 FAM216AQ8WUB2 273 aa17.76■□□□□ 0.43
TPM4-201ENST00000300933 GGTLC1Q9BX51 225 aa17.76■□□□□ 0.43
TPM4-201ENST00000300933 IGHV3-48P01763 117 aa17.76■□□□□ 0.43
TPM4-201ENST00000300933 RNF114Q9Y508 228 aa17.76■□□□□ 0.43
TPM4-201ENST00000300933 IL6RP08887 468 aaPredicted RBP17.75■□□□□ 0.43
TPM4-201ENST00000300933 LINC00614P0C842 121 aa17.75■□□□□ 0.43
TPM4-201ENST00000300933 KRTDAPP60985 99 aa17.75■□□□□ 0.43
TPM4-201ENST00000300933 YPEL3P61236 119 aaPredicted RBP17.75■□□□□ 0.43
TPM4-201ENST00000300933 PAFAH1B2P68402 229 aa17.75■□□□□ 0.43
TPM4-201ENST00000300933 HLA-DRB5Q30154 266 aa17.75■□□□□ 0.43
TPM4-201ENST00000300933 PLEKHA3Q9HB20 300 aa17.75■□□□□ 0.43
TPM4-201ENST00000300933 GATA2P23769 480 aaPredicted RBP17.75■□□□□ 0.43
TPM4-201ENST00000300933 C11orf42Q8N5U0 333 aa17.75■□□□□ 0.43
TPM4-201ENST00000300933 OR10G8Q8NGN5 311 aa17.75■□□□□ 0.43
TPM4-201ENST00000300933 BTF3L4Q96K17 158 aa17.75■□□□□ 0.43
TPM4-201ENST00000300933 KCNIP2Q9NS61 270 aa17.75■□□□□ 0.43
TPM4-201ENST00000300933 IGFBPL1Q8WX77 278 aa17.75■□□□□ 0.43
TPM4-201ENST00000300933 PKD1L2Q7Z442 2459 aa17.74■□□□□ 0.43
TPM4-201ENST00000300933 ENSAO43768 121 aaKnown RBP17.74■□□□□ 0.43
TPM4-201ENST00000300933 ARL14EPLP0DKL9 152 aa17.74■□□□□ 0.43
TPM4-201ENST00000300933 APELAP0DMC3 54 aa17.74■□□□□ 0.43
TPM4-201ENST00000300933 IGFBP2P18065 325 aa17.74■□□□□ 0.43
TPM4-201ENST00000300933 IER3P46695 156 aa17.74■□□□□ 0.43
TPM4-201ENST00000300933 MMDQ15546 238 aa17.74■□□□□ 0.43
TPM4-201ENST00000300933 SPATA31B1PQ5VZV4 182 aa17.74■□□□□ 0.43
TPM4-201ENST00000300933 ST6GALNAC3Q8NDV1 305 aa17.74■□□□□ 0.43
TPM4-201ENST00000300933 FCN1O00602 326 aa17.74■□□□□ 0.43
TPM4-201ENST00000300933 SPINK4O60575 86 aa17.74■□□□□ 0.43
TPM4-201ENST00000300933 FLYWCH2Q96CP2 140 aaKnown RBP17.74■□□□□ 0.43
TPM4-201ENST00000300933 TPSG1Q9NRR2 321 aa17.74■□□□□ 0.43
TPM4-201ENST00000300933 APOA2P02652 100 aa17.73■□□□□ 0.43
TPM4-201ENST00000300933 IGHV1-8P0DP01 117 aa17.73■□□□□ 0.43
TPM4-201ENST00000300933 DLX6P56179 175 aa17.73■□□□□ 0.43
TPM4-201ENST00000300933 EFNB3Q15768 340 aa17.73■□□□□ 0.43
TPM4-201ENST00000300933 TMEM155Q4W5P6 130 aa17.73■□□□□ 0.43
TPM4-201ENST00000300933 NPVFQ9HCQ7 196 aa17.73■□□□□ 0.43
TPM4-201ENST00000300933 PRNDQ9UKY0 176 aa17.73■□□□□ 0.43
TPM4-201ENST00000300933 ACTL6BO94805 426 aa17.73■□□□□ 0.43
TPM4-201ENST00000300933 SELENOTP62341 195 aa17.73■□□□□ 0.43
TPM4-201ENST00000300933 SSX8Q7RTT4 187 aa17.73■□□□□ 0.43
TPM4-201ENST00000300933 OR1L6Q8NGR2 347 aa17.73■□□□□ 0.43
TPM4-201ENST00000300933 SEPSECSQ9HD40 501 aaKnown RBP17.73■□□□□ 0.43
TPM4-201ENST00000300933 DNAJC4Q9NNZ3 241 aa17.73■□□□□ 0.43
TPM4-201ENST00000300933 VPS13CQ709C8 3753 aa17.73■□□□□ 0.43
TPM4-201ENST00000300933 COMPP49747 757 aaPredicted RBP17.72■□□□□ 0.43
TPM4-201ENST00000300933 RANP62826 216 aaKnown RBP17.72■□□□□ 0.43
TPM4-201ENST00000300933 POU2AF1Q16633 256 aa17.72■□□□□ 0.43
TPM4-201ENST00000300933 OR5AN1Q8NGI8 311 aa17.72■□□□□ 0.43
TPM4-201ENST00000300933 NABP2Q9BQ15 211 aa17.72■□□□□ 0.43
TPM4-201ENST00000300933 FBXL7Q9UJT9 491 aa17.72■□□□□ 0.43
TPM4-201ENST00000300933 PRCDQ00LT1 54 aa17.72■□□□□ 0.43
TPM4-201ENST00000300933 ZNF672Q499Z4 452 aaPredicted RBP17.72■□□□□ 0.43
TPM4-201ENST00000300933 COX7A1P24310 79 aa17.71■□□□□ 0.43
TPM4-201ENST00000300933 COL5A1-AS1Q5SY13 56 aa17.71■□□□□ 0.43
TPM4-201ENST00000300933 SNURFLB1AK76 121 aa17.71■□□□□ 0.43
TPM4-201ENST00000300933 FOXH1O75593 365 aa17.71■□□□□ 0.43
TPM4-201ENST00000300933 REG1AP05451 166 aa17.71■□□□□ 0.43
TPM4-201ENST00000300933 TEPPQ6URK8 271 aa17.71■□□□□ 0.43
TPM4-201ENST00000300933 STPG3Q8N7X2 389 aa17.71■□□□□ 0.43
TPM4-201ENST00000300933 KAAG1Q9UBP8 84 aa17.71■□□□□ 0.43
TPM4-201ENST00000300933 LSM4Q9Y4Z0 139 aaKnown RBP17.71■□□□□ 0.43
TPM4-201ENST00000300933 IGKV1OR2-108A0A075B7D4 117 aa17.7■□□□□ 0.42
TPM4-201ENST00000300933 SLC25A17O43808 307 aa17.7■□□□□ 0.42
TPM4-201ENST00000300933 OPRK1P41145 380 aa17.7■□□□□ 0.42
TPM4-201ENST00000300933 MRPL52Q86TS9 123 aaKnown RBP17.7■□□□□ 0.42
TPM4-201ENST00000300933 SIGLECL1Q8N7X8 197 aa17.7■□□□□ 0.42
TPM4-201ENST00000300933 COMMD5Q9GZQ3 224 aa17.7■□□□□ 0.42
TPM4-201ENST00000300933 K7EN84 100 aa17.7■□□□□ 0.42
TPM4-201ENST00000300933 ST6GALNAC6Q969X2 333 aa17.7■□□□□ 0.42
TPM4-201ENST00000300933 CNTFRP26992 372 aa17.69■□□□□ 0.42
TPM4-201ENST00000300933 KIAA1644Q3SXP7 199 aa17.69■□□□□ 0.42
TPM4-201ENST00000300933 DIRC3C9JPN6 131 aa17.69■□□□□ 0.42
TPM4-201ENST00000300933 RPL8P62917 257 aaKnown RBP17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms