RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 METRNQ9UJH8 293 aa12.27□□□□□ -0.44
SPIDR-201ENST00000297423 MRPS16Q9Y3D3 137 aaKnown RBP12.27□□□□□ -0.44
SPIDR-201ENST00000297423 IGHV2-26A0A0B4J1V2 119 aa12.27□□□□□ -0.45
SPIDR-201ENST00000297423 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.27□□□□□ -0.45
SPIDR-201ENST00000297423 HTR1DP28221 377 aa12.27□□□□□ -0.45
SPIDR-201ENST00000297423 Q8NFD4 153 aa12.27□□□□□ -0.45
SPIDR-201ENST00000297423 OR52E5Q8NH55 327 aa12.27□□□□□ -0.45
SPIDR-201ENST00000297423 IGLC7A0M8Q6 106 aa12.27□□□□□ -0.45
SPIDR-201ENST00000297423 AGFG2O95081 481 aa12.27□□□□□ -0.45
SPIDR-201ENST00000297423 MAGEA5P43359 124 aa12.27□□□□□ -0.45
SPIDR-201ENST00000297423 MEOX1P50221 254 aa12.27□□□□□ -0.45
SPIDR-201ENST00000297423 GTF2H5Q6ZYL4 71 aa12.27□□□□□ -0.45
SPIDR-201ENST00000297423 WFDC3Q8IUB2 231 aa12.27□□□□□ -0.45
SPIDR-201ENST00000297423 TMEM238C9JI98 176 aa12.26□□□□□ -0.45
SPIDR-201ENST00000297423 PLP1P60201 277 aa12.26□□□□□ -0.45
SPIDR-201ENST00000297423 Q6ZS49 121 aa12.26□□□□□ -0.45
SPIDR-201ENST00000297423 AMMECR1Q9Y4X0 333 aaPredicted RBP12.26□□□□□ -0.45
SPIDR-201ENST00000297423 FOXF2Q12947 444 aa12.26□□□□□ -0.45
SPIDR-201ENST00000297423 MPDU1O75352 247 aa12.26□□□□□ -0.45
SPIDR-201ENST00000297423 SP1P08047 785 aa12.26□□□□□ -0.45
SPIDR-201ENST00000297423 CTRLP40313 264 aa12.26□□□□□ -0.45
SPIDR-201ENST00000297423 TXNDC17Q9BRA2 123 aa12.26□□□□□ -0.45
SPIDR-201ENST00000297423 AHRRA9YTQ3 701 aa12.25□□□□□ -0.45
SPIDR-201ENST00000297423 FCER1GP30273 86 aa12.25□□□□□ -0.45
SPIDR-201ENST00000297423 NMUP48645 174 aa12.25□□□□□ -0.45
SPIDR-201ENST00000297423 ARF6P62330 175 aa12.25□□□□□ -0.45
SPIDR-201ENST00000297423 VWC2Q2TAL6 325 aa12.25□□□□□ -0.45
SPIDR-201ENST00000297423 Q6P435 159 aa12.25□□□□□ -0.45
SPIDR-201ENST00000297423 OR9G1Q8NH87 305 aa12.25□□□□□ -0.45
SPIDR-201ENST00000297423 PRSS3P2Q8NHM4 247 aa12.25□□□□□ -0.45
SPIDR-201ENST00000297423 OR2V2Q96R30 315 aa12.25□□□□□ -0.45
SPIDR-201ENST00000297423 TANC2Q9HCD6 1990 aa12.25□□□□□ -0.45
SPIDR-201ENST00000297423 PMS2P5A8MQ11 134 aa12.25□□□□□ -0.45
SPIDR-201ENST00000297423 DNPH1O43598 174 aa12.25□□□□□ -0.45
SPIDR-201ENST00000297423 SMPD2O60906 423 aa12.25□□□□□ -0.45
SPIDR-201ENST00000297423 SMAGPQ0VAQ4 97 aa12.25□□□□□ -0.45
SPIDR-201ENST00000297423 DEFB109BQ30KR1 87 aa12.25□□□□□ -0.45
SPIDR-201ENST00000297423 VWA1Q6PCB0 445 aa12.25□□□□□ -0.45
SPIDR-201ENST00000297423 BHLHA15Q7RTS1 189 aaPredicted RBP12.25□□□□□ -0.45
SPIDR-201ENST00000297423 SPACA3Q8IXA5 215 aa12.25□□□□□ -0.45
SPIDR-201ENST00000297423 ASCL2Q99929 193 aa12.25□□□□□ -0.45
SPIDR-201ENST00000297423 TTTY12Q9BZ98 90 aa12.25□□□□□ -0.45
SPIDR-201ENST00000297423 TNFRSF19Q9NS68 423 aa12.25□□□□□ -0.45
SPIDR-201ENST00000297423 PINLYPA6NC86 204 aa12.25□□□□□ -0.45
SPIDR-201ENST00000297423 ZNF766Q5HY98 468 aa12.25□□□□□ -0.45
SPIDR-201ENST00000297423 GGNQ86UU5 652 aa12.25□□□□□ -0.45
SPIDR-201ENST00000297423 TRAV8-6A0A0B4J262 113 aa12.24□□□□□ -0.45
SPIDR-201ENST00000297423 IZUMO1RA6ND01 250 aa12.24□□□□□ -0.45
SPIDR-201ENST00000297423 NEUROG1Q92886 237 aa12.24□□□□□ -0.45
SPIDR-201ENST00000297423 TRGV10A0A0A0MS01 117 aa12.24□□□□□ -0.45
SPIDR-201ENST00000297423 J3QR06 171 aa12.24□□□□□ -0.45
SPIDR-201ENST00000297423 PEF1Q9UBV8 284 aaKnown RBP12.24□□□□□ -0.45
SPIDR-201ENST00000297423 HIST1H1EP10412 219 aaKnown RBP12.24□□□□□ -0.45
SPIDR-201ENST00000297423 Q8N976 141 aa12.24□□□□□ -0.45
SPIDR-201ENST00000297423 NUP35Q8NFH5 326 aa12.24□□□□□ -0.45
SPIDR-201ENST00000297423 SMIM12Q96EX1 92 aa12.24□□□□□ -0.45
SPIDR-201ENST00000297423 GTSF1LQ9H1H1 148 aa12.24□□□□□ -0.45
SPIDR-201ENST00000297423 TMSB15BA0A087X1C1 80 aa12.23□□□□□ -0.45
SPIDR-201ENST00000297423 CLDN18P56856 261 aa12.23□□□□□ -0.45
SPIDR-201ENST00000297423 OR1N2Q8NGR9 330 aa12.23□□□□□ -0.45
SPIDR-201ENST00000297423 LRRC29Q8WV35 223 aa12.23□□□□□ -0.45
SPIDR-201ENST00000297423 SARAFQ96BY9 339 aa12.23□□□□□ -0.45
SPIDR-201ENST00000297423 SNRNP40Q96DI7 357 aaKnown RBP12.23□□□□□ -0.45
SPIDR-201ENST00000297423 POM121L2Q96KW2 1035 aa12.23□□□□□ -0.45
SPIDR-201ENST00000297423 Q8IYB0 196 aa12.23□□□□□ -0.45
SPIDR-201ENST00000297423 ZBTB34Q8NCN2 500 aa12.23□□□□□ -0.45
SPIDR-201ENST00000297423 C5orf30Q96GV9 206 aa12.23□□□□□ -0.45
SPIDR-201ENST00000297423 CSTL1Q9H114 145 aa12.23□□□□□ -0.45
SPIDR-201ENST00000297423 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.23□□□□□ -0.45
SPIDR-201ENST00000297423 GPR183P32249 361 aa12.23□□□□□ -0.45
SPIDR-201ENST00000297423 NBL1P41271 181 aa12.23□□□□□ -0.45
SPIDR-201ENST00000297423 COX19Q49B96 90 aa12.23□□□□□ -0.45
SPIDR-201ENST00000297423 FA2HQ7L5A8 372 aa12.23□□□□□ -0.45
SPIDR-201ENST00000297423 LINC00596Q86U02 117 aa12.23□□□□□ -0.45
SPIDR-201ENST00000297423 C2CD3Q4AC94 2353 aa12.22□□□□□ -0.45
SPIDR-201ENST00000297423 FAM231BA6NCW3 169 aa12.22□□□□□ -0.45
SPIDR-201ENST00000297423 ISLRO14498 428 aa12.22□□□□□ -0.45
SPIDR-201ENST00000297423 REG1BP48304 166 aa12.22□□□□□ -0.45
SPIDR-201ENST00000297423 TBR1Q16650 682 aa12.22□□□□□ -0.45
SPIDR-201ENST00000297423 PNKDQ8N490 385 aa12.22□□□□□ -0.45
SPIDR-201ENST00000297423 OR2Z1Q8NG97 314 aa12.22□□□□□ -0.45
SPIDR-201ENST00000297423 OSTCQ9NRP0 149 aa12.22□□□□□ -0.45
SPIDR-201ENST00000297423 RNPS1Q15287 305 aaKnown RBP12.22□□□□□ -0.45
SPIDR-201ENST00000297423 RTL8BQ17RB0 113 aa12.22□□□□□ -0.45
SPIDR-201ENST00000297423 ZNF718Q3SXZ3 478 aa12.22□□□□□ -0.45
SPIDR-201ENST00000297423 LRRC10Q5BKY1 277 aa12.22□□□□□ -0.45
SPIDR-201ENST00000297423 ZNRF1Q8ND25 227 aa12.22□□□□□ -0.45
SPIDR-201ENST00000297423 A0A1W2PRE2 83 aa12.22□□□□□ -0.45
SPIDR-201ENST00000297423 GGTLC3B5MD39 225 aa12.22□□□□□ -0.45
SPIDR-201ENST00000297423 TAX1BP3O14907 124 aa12.22□□□□□ -0.45
SPIDR-201ENST00000297423 FAM201AQ5SY85 155 aa12.22□□□□□ -0.45
SPIDR-201ENST00000297423 BVES-AS1Q5T3Y7 98 aa12.22□□□□□ -0.45
SPIDR-201ENST00000297423 OR1B1Q8NGR6 318 aa12.22□□□□□ -0.45
SPIDR-201ENST00000297423 ZGRF1Q86YA3 2104 aa12.22□□□□□ -0.45
SPIDR-201ENST00000297423 MUC6Q6W4X9 2439 aa12.22□□□□□ -0.45
SPIDR-201ENST00000297423 HCFC1P51610 2035 aa12.22□□□□□ -0.45
SPIDR-201ENST00000297423 PGPA6NDG6 321 aa12.21□□□□□ -0.45
SPIDR-201ENST00000297423 K7EP13 123 aa12.21□□□□□ -0.45
SPIDR-201ENST00000297423 OR51B2Q9Y5P1 312 aa12.21□□□□□ -0.45
SPIDR-201ENST00000297423 TRAV9-1A0A075B6T8 112 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms