RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 HIST1H2BHQ93079 126 aa9.48□□□□□ -0.89
HMGB2-201ENST00000296503 TMEM68Q96MH6 324 aa9.48□□□□□ -0.89
HMGB2-201ENST00000296503 HSD17B10Q99714 261 aaKnown RBP9.48□□□□□ -0.89
HMGB2-201ENST00000296503 HIST1H2BNQ99877 126 aa9.48□□□□□ -0.89
HMGB2-201ENST00000296503 HIST1H2BMQ99879 126 aa9.48□□□□□ -0.89
HMGB2-201ENST00000296503 ZNF2Q9BSG1 426 aaPredicted RBP9.48□□□□□ -0.89
HMGB2-201ENST00000296503 PLXNB1O43157 2135 aa9.48□□□□□ -0.89
HMGB2-201ENST00000296503 TRAV41A0A0B4J266 112 aa9.47□□□□□ -0.89
HMGB2-201ENST00000296503 A0A1B0GV90 55 aa9.47□□□□□ -0.89
HMGB2-201ENST00000296503 SRRM4A7MD48 611 aaKnown RBP9.47□□□□□ -0.89
HMGB2-201ENST00000296503 CA2P00918 260 aa9.47□□□□□ -0.89
HMGB2-201ENST00000296503 IGLV2-23P01705 113 aa9.47□□□□□ -0.89
HMGB2-201ENST00000296503 ELANEP08246 267 aa9.47□□□□□ -0.89
HMGB2-201ENST00000296503 RAB4AP20338 218 aa9.47□□□□□ -0.89
HMGB2-201ENST00000296503 GNB1P62873 340 aa9.47□□□□□ -0.89
HMGB2-201ENST00000296503 TMEM267Q0VDI3 215 aaPredicted RBP9.47□□□□□ -0.89
HMGB2-201ENST00000296503 ECSCRQ19T08 205 aa9.47□□□□□ -0.89
HMGB2-201ENST00000296503 VMA21Q3ZAQ7 101 aa9.47□□□□□ -0.89
HMGB2-201ENST00000296503 ZNF562Q6V9R5 426 aa9.47□□□□□ -0.89
HMGB2-201ENST00000296503 ZNF66Q6ZN08 573 aa9.47□□□□□ -0.89
HMGB2-201ENST00000296503 LCNL1Q6ZST4 164 aa9.47□□□□□ -0.89
HMGB2-201ENST00000296503 PPP1R27Q86WC6 154 aa9.47□□□□□ -0.89
HMGB2-201ENST00000296503 ZBTB34Q8NCN2 500 aa9.47□□□□□ -0.89
HMGB2-201ENST00000296503 OR10D4PQ8NGN7 298 aa9.47□□□□□ -0.89
HMGB2-201ENST00000296503 GPHA2Q96T91 129 aa9.47□□□□□ -0.89
HMGB2-201ENST00000296503 ACTR3CQ9C0K3 210 aaPredicted RBP9.47□□□□□ -0.89
HMGB2-201ENST00000296503 GSKIPQ9P0R6 139 aa9.47□□□□□ -0.89
HMGB2-201ENST00000296503 KCNIP3Q9Y2W7 256 aa9.47□□□□□ -0.89
HMGB2-201ENST00000296503 VWFP04275 2813 aa9.47□□□□□ -0.89
HMGB2-201ENST00000296503 RBFOX3A6NFN3 312 aa9.47□□□□□ -0.89
HMGB2-201ENST00000296503 PF4P02776 101 aa9.47□□□□□ -0.89
HMGB2-201ENST00000296503 RPLP1P05386 114 aaKnown RBP9.47□□□□□ -0.89
HMGB2-201ENST00000296503 RPL23AP62750 156 aaKnown RBP9.47□□□□□ -0.89
HMGB2-201ENST00000296503 PNRC1Q12796 327 aaPredicted RBP9.47□□□□□ -0.89
HMGB2-201ENST00000296503 FOXE3Q13461 319 aa9.47□□□□□ -0.89
HMGB2-201ENST00000296503 FXYD3Q14802 87 aa9.47□□□□□ -0.89
HMGB2-201ENST00000296503 JOSD1Q15040 202 aaPredicted RBP9.47□□□□□ -0.89
HMGB2-201ENST00000296503 COA6Q5JTJ3 125 aaKnown RBP9.47□□□□□ -0.89
HMGB2-201ENST00000296503 OSR1Q8TAX0 266 aaPredicted RBP9.47□□□□□ -0.89
HMGB2-201ENST00000296503 CD300LFQ8TDQ1 290 aa9.47□□□□□ -0.89
HMGB2-201ENST00000296503 FAM103A1Q9BTL3 118 aaKnown RBP9.47□□□□□ -0.89
HMGB2-201ENST00000296503 TPSG1Q9NRR2 321 aa9.47□□□□□ -0.89
HMGB2-201ENST00000296503 IGHG4P01861 327 aa9.46□□□□□ -0.9
HMGB2-201ENST00000296503 SRP19P09132 144 aaKnown RBP9.46□□□□□ -0.9
HMGB2-201ENST00000296503 FGF7P21781 194 aa9.46□□□□□ -0.9
HMGB2-201ENST00000296503 NDPQ00604 133 aa9.46□□□□□ -0.9
HMGB2-201ENST00000296503 ZNF616Q08AN1 781 aa9.46□□□□□ -0.9
HMGB2-201ENST00000296503 MSMO1Q15800 293 aa9.46□□□□□ -0.9
HMGB2-201ENST00000296503 ZNF506Q5JVG8 444 aa9.46□□□□□ -0.9
HMGB2-201ENST00000296503 GGNBP1Q5YKI7 109 aa9.46□□□□□ -0.9
HMGB2-201ENST00000296503 MRPL52Q86TS9 123 aaKnown RBP9.46□□□□□ -0.9
HMGB2-201ENST00000296503 TEX45Q8NA69 505 aa9.46□□□□□ -0.9
HMGB2-201ENST00000296503 TVP23CQ96ET8 276 aa9.46□□□□□ -0.9
HMGB2-201ENST00000296503 ZNF580Q9UK33 172 aa9.46□□□□□ -0.9
HMGB2-201ENST00000296503 FBXO7Q9Y3I1 522 aa9.46□□□□□ -0.9
HMGB2-201ENST00000296503 TRBV24-1A0A075B6N3 115 aa9.45□□□□□ -0.9
HMGB2-201ENST00000296503 A8MWP6 167 aa9.45□□□□□ -0.9
HMGB2-201ENST00000296503 H3BQ15 152 aa9.45□□□□□ -0.9
HMGB2-201ENST00000296503 CRYGBP07316 175 aa9.45□□□□□ -0.9
HMGB2-201ENST00000296503 PPIFP30405 207 aaKnown RBP9.45□□□□□ -0.9
HMGB2-201ENST00000296503 CFHR3Q02985 330 aa9.45□□□□□ -0.9
HMGB2-201ENST00000296503 ZNF266Q14584 549 aa9.45□□□□□ -0.9
HMGB2-201ENST00000296503 KHDC3LQ587J8 217 aa9.45□□□□□ -0.9
HMGB2-201ENST00000296503 UNQ5815/PRO19632Q6UWF5 114 aa9.45□□□□□ -0.9
HMGB2-201ENST00000296503 ZNF818PQ6ZRF7 136 aa9.45□□□□□ -0.9
HMGB2-201ENST00000296503 C18orf65Q6ZTR6 163 aa9.45□□□□□ -0.9
HMGB2-201ENST00000296503 ZNF695Q8IW36 515 aa9.45□□□□□ -0.9
HMGB2-201ENST00000296503 KLHL30-AS1Q8NEE0 82 aa9.45□□□□□ -0.9
HMGB2-201ENST00000296503 OR4S2Q8NH73 311 aa9.45□□□□□ -0.9
HMGB2-201ENST00000296503 Q8WTZ3 238 aa9.45□□□□□ -0.9
HMGB2-201ENST00000296503 ARPC1AQ92747 370 aa9.45□□□□□ -0.9
HMGB2-201ENST00000296503 NDUFAF3Q9BU61 184 aa9.45□□□□□ -0.9
HMGB2-201ENST00000296503 TRAV1-1A0A0B4J248 108 aa9.45□□□□□ -0.9
HMGB2-201ENST00000296503 A0A1W2PN81 502 aa9.45□□□□□ -0.9
HMGB2-201ENST00000296503 PHOX2AO14813 284 aa9.45□□□□□ -0.9
HMGB2-201ENST00000296503 LY86O95711 162 aa9.45□□□□□ -0.9
HMGB2-201ENST00000296503 HBE1P02100 147 aa9.45□□□□□ -0.9
HMGB2-201ENST00000296503 MBPP02686 304 aaPredicted RBP9.45□□□□□ -0.9
HMGB2-201ENST00000296503 EGR2P11161 476 aaPredicted RBP9.45□□□□□ -0.9
HMGB2-201ENST00000296503 GNRHRP30968 328 aa9.45□□□□□ -0.9
HMGB2-201ENST00000296503 CHRNA7P36544 502 aa9.45□□□□□ -0.9
HMGB2-201ENST00000296503 TAGLN2P37802 199 aaKnown RBP9.45□□□□□ -0.9
HMGB2-201ENST00000296503 KIR2DS2P43631 304 aa9.45□□□□□ -0.9
HMGB2-201ENST00000296503 UBE2KP61086 200 aa9.45□□□□□ -0.9
HMGB2-201ENST00000296503 NHLH2Q02577 135 aa9.45□□□□□ -0.9
HMGB2-201ENST00000296503 CATR1Q13166 79 aa9.45□□□□□ -0.9
HMGB2-201ENST00000296503 EIF4EBP1Q13541 118 aaPredicted RBP9.45□□□□□ -0.9
HMGB2-201ENST00000296503 GAMTQ14353 236 aa9.45□□□□□ -0.9
HMGB2-201ENST00000296503 ZNF674Q2M3X9 581 aa9.45□□□□□ -0.9
HMGB2-201ENST00000296503 C8orf86Q6ZUL3 223 aa9.45□□□□□ -0.9
HMGB2-201ENST00000296503 MOB3AQ96BX8 217 aa9.45□□□□□ -0.9
HMGB2-201ENST00000296503 C20orf24Q9BUV8 137 aa9.45□□□□□ -0.9
HMGB2-201ENST00000296503 WFDC1Q9HC57 220 aa9.45□□□□□ -0.9
HMGB2-201ENST00000296503 OR5AC1P0C628 307 aa9.44□□□□□ -0.9
HMGB2-201ENST00000296503 CD33P20138 364 aa9.44□□□□□ -0.9
HMGB2-201ENST00000296503 PSMB8P28062 276 aa9.44□□□□□ -0.9
HMGB2-201ENST00000296503 NUTF2P61970 127 aaKnown RBP9.44□□□□□ -0.9
HMGB2-201ENST00000296503 SPSB3Q6PJ21 355 aa9.44□□□□□ -0.9
HMGB2-201ENST00000296503 CMTM1Q8IZ96 169 aa9.44□□□□□ -0.9
HMGB2-201ENST00000296503 TCTEX1D1Q8N7M0 179 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms