RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 C8orf88P0DMB2 117 aa11.2□□□□□ -0.62
HPS3-201ENST00000296051 FAM106AQ4KMX7 169 aa11.2□□□□□ -0.62
HPS3-201ENST00000296051 SLC25A34Q6PIV7 304 aa11.2□□□□□ -0.62
HPS3-201ENST00000296051 MUC21A0A0G2JKD1 596 aa11.19□□□□□ -0.62
HPS3-201ENST00000296051 MUC21A0A140T8X8 626 aa11.19□□□□□ -0.62
HPS3-201ENST00000296051 LILRA1O75019 489 aa11.19□□□□□ -0.62
HPS3-201ENST00000296051 MUC21Q5SSG8 566 aa11.19□□□□□ -0.62
HPS3-201ENST00000296051 ZNF324BQ6AW86 544 aaPredicted RBP11.19□□□□□ -0.62
HPS3-201ENST00000296051 LCN12Q6JVE5 192 aa11.19□□□□□ -0.62
HPS3-201ENST00000296051 C20orf204Q6ZNR8 217 aa11.19□□□□□ -0.62
HPS3-201ENST00000296051 NBL1P41271 181 aa11.19□□□□□ -0.62
HPS3-201ENST00000296051 PEAR1Q5VY43 1037 aaPredicted RBP11.19□□□□□ -0.62
HPS3-201ENST00000296051 LINC01551Q86U37 167 aa11.19□□□□□ -0.62
HPS3-201ENST00000296051 ANOS1P23352 680 aa11.18□□□□□ -0.62
HPS3-201ENST00000296051 Q0VFX4 171 aa11.18□□□□□ -0.62
HPS3-201ENST00000296051 Q6ZS92 163 aa11.18□□□□□ -0.62
HPS3-201ENST00000296051 DUX5Q96PT3 197 aa11.18□□□□□ -0.62
HPS3-201ENST00000296051 SNHG12Q9BXW3 62 aa11.18□□□□□ -0.62
HPS3-201ENST00000296051 J3QW42 95 aa11.18□□□□□ -0.62
HPS3-201ENST00000296051 DLEU1O43261 78 aa11.18□□□□□ -0.62
HPS3-201ENST00000296051 ID1P41134 155 aa11.18□□□□□ -0.62
HPS3-201ENST00000296051 RPL30P62888 115 aaKnown RBP11.18□□□□□ -0.62
HPS3-201ENST00000296051 F11RQ9Y624 299 aaKnown RBP11.18□□□□□ -0.62
HPS3-201ENST00000296051 J3QKU1 62 aa11.18□□□□□ -0.62
HPS3-201ENST00000296051 MOSP00540 346 aa11.18□□□□□ -0.62
HPS3-201ENST00000296051 TM4SF20Q53R12 229 aa11.18□□□□□ -0.62
HPS3-201ENST00000296051 EBLN2Q6P2I7 272 aa11.18□□□□□ -0.62
HPS3-201ENST00000296051 LHFPL4Q7Z7J7 247 aa11.18□□□□□ -0.62
HPS3-201ENST00000296051 C2orf88Q9BSF0 95 aa11.18□□□□□ -0.62
HPS3-201ENST00000296051 TMEM242Q9NWH2 141 aa11.18□□□□□ -0.62
HPS3-201ENST00000296051 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.18□□□□□ -0.62
HPS3-201ENST00000296051 TIMP3P35625 211 aa11.18□□□□□ -0.62
HPS3-201ENST00000296051 SLC35E4Q6ICL7 350 aa11.18□□□□□ -0.62
HPS3-201ENST00000296051 SSC4DQ8WTU2 575 aa11.18□□□□□ -0.62
HPS3-201ENST00000296051 CFPP27918 469 aa11.17□□□□□ -0.62
HPS3-201ENST00000296051 MRPS18CQ9Y3D5 142 aaKnown RBP11.17□□□□□ -0.62
HPS3-201ENST00000296051 PRDM13Q9H4Q3 707 aa11.17□□□□□ -0.62
HPS3-201ENST00000296051 RBFOX2O43251 390 aaKnown RBP eCLIP11.17□□□□□ -0.62
HPS3-201ENST00000296051 SPATA31B1PQ5VZV4 182 aa11.17□□□□□ -0.62
HPS3-201ENST00000296051 TMEM186Q96B77 213 aa11.17□□□□□ -0.62
HPS3-201ENST00000296051 ALPK3Q96L96 1907 aa11.17□□□□□ -0.62
HPS3-201ENST00000296051 OR4C46A6NHA9 309 aa11.17□□□□□ -0.62
HPS3-201ENST00000296051 THBDP07204 575 aa11.17□□□□□ -0.62
HPS3-201ENST00000296051 CD24P25063 80 aa11.17□□□□□ -0.62
HPS3-201ENST00000296051 OR4C13Q8NGP0 309 aa11.17□□□□□ -0.62
HPS3-201ENST00000296051 IGKV3D-15A0A087WSY6 115 aa11.16□□□□□ -0.62
HPS3-201ENST00000296051 IGHV3-49A0A0A0MS15 119 aa11.16□□□□□ -0.62
HPS3-201ENST00000296051 A0A1B0GW64 132 aa11.16□□□□□ -0.62
HPS3-201ENST00000296051 TMEM8BA6NDV4 472 aa11.16□□□□□ -0.62
HPS3-201ENST00000296051 SS18L1O75177 396 aaPredicted RBP11.16□□□□□ -0.62
HPS3-201ENST00000296051 IGKV3-15P01624 115 aa11.16□□□□□ -0.62
HPS3-201ENST00000296051 CCL3L1P16619 93 aa11.16□□□□□ -0.62
HPS3-201ENST00000296051 IL15RAQ13261 267 aa11.16□□□□□ -0.62
HPS3-201ENST00000296051 C1orf194Q5T5A4 169 aa11.16□□□□□ -0.62
HPS3-201ENST00000296051 FAM53AQ6NSI3 398 aaPredicted RBP11.16□□□□□ -0.62
HPS3-201ENST00000296051 C16orf92Q96LL3 132 aa11.16□□□□□ -0.62
HPS3-201ENST00000296051 HSPB8Q9UJY1 196 aa11.16□□□□□ -0.62
HPS3-201ENST00000296051 SP5Q6BEB4 398 aaPredicted RBP11.16□□□□□ -0.62
HPS3-201ENST00000296051 S4R3C0 116 aa11.16□□□□□ -0.62
HPS3-201ENST00000296051 MALRD1Q5VYJ5 2156 aa11.16□□□□□ -0.62
HPS3-201ENST00000296051 TRAV1-1A0A0B4J248 108 aa11.16□□□□□ -0.62
HPS3-201ENST00000296051 TRGV3P03979 118 aa11.16□□□□□ -0.62
HPS3-201ENST00000296051 SRSF12Q8WXF0 261 aaKnown RBP11.16□□□□□ -0.62
HPS3-201ENST00000296051 DDB2Q92466 427 aa11.16□□□□□ -0.62
HPS3-201ENST00000296051 METTL26Q96S19 204 aa11.16□□□□□ -0.62
HPS3-201ENST00000296051 FBXL15Q9H469 300 aa11.16□□□□□ -0.62
HPS3-201ENST00000296051 MYO9AB2RTY4 2548 aa11.16□□□□□ -0.62
HPS3-201ENST00000296051 PLXNA4Q9HCM2 1894 aa11.16□□□□□ -0.62
HPS3-201ENST00000296051 IGKV1-6A0A0C4DH72 117 aa11.15□□□□□ -0.62
HPS3-201ENST00000296051 HYPMO75409 117 aa11.15□□□□□ -0.62
HPS3-201ENST00000296051 C12orf54Q6X4T0 127 aa11.15□□□□□ -0.62
HPS3-201ENST00000296051 A0A1W2PS18 150 aa11.15□□□□□ -0.62
HPS3-201ENST00000296051 IGKV3-20P01619 116 aa11.15□□□□□ -0.62
HPS3-201ENST00000296051 OR9G9P0C7N8 305 aa11.15□□□□□ -0.62
HPS3-201ENST00000296051 SCGB1C2P0DMR2 95 aa11.15□□□□□ -0.62
HPS3-201ENST00000296051 BTF3P20290 206 aaKnown RBP11.15□□□□□ -0.62
HPS3-201ENST00000296051 RIGQ13278 110 aa11.15□□□□□ -0.62
HPS3-201ENST00000296051 ALKBH7Q9BT30 221 aaPredicted RBP11.15□□□□□ -0.62
HPS3-201ENST00000296051 PCNX3Q9H6A9 2034 aa11.15□□□□□ -0.62
HPS3-201ENST00000296051 PSPNO60542 156 aa11.15□□□□□ -0.62
HPS3-201ENST00000296051 ACP7Q6ZNF0 438 aa11.15□□□□□ -0.62
HPS3-201ENST00000296051 DMRTC2Q8IXT2 367 aaPredicted RBP11.15□□□□□ -0.62
HPS3-201ENST00000296051 OR4X2Q8NGF9 303 aa11.15□□□□□ -0.62
HPS3-201ENST00000296051 TMEM70Q9BUB7 260 aa11.15□□□□□ -0.62
HPS3-201ENST00000296051 GCSHP23434 173 aa11.15□□□□□ -0.63
HPS3-201ENST00000296051 KIR2DL2P43627 348 aaPredicted RBP11.15□□□□□ -0.63
HPS3-201ENST00000296051 C19orf35Q6ZS72 473 aa11.15□□□□□ -0.63
HPS3-201ENST00000296051 PLXNB3Q9ULL4 1909 aa11.15□□□□□ -0.63
HPS3-201ENST00000296051 PFN1P07737 140 aaKnown RBP11.14□□□□□ -0.63
HPS3-201ENST00000296051 SEPSECSQ9HD40 501 aaKnown RBP11.14□□□□□ -0.63
HPS3-201ENST00000296051 JPT1Q9UK76 154 aa11.14□□□□□ -0.63
HPS3-201ENST00000296051 A0A0G2JNJ9 132 aa11.14□□□□□ -0.63
HPS3-201ENST00000296051 A6NDN8 102 aa11.14□□□□□ -0.63
HPS3-201ENST00000296051 LY6HO94772 140 aa11.14□□□□□ -0.63
HPS3-201ENST00000296051 IGKV1D-33P01593 117 aa11.14□□□□□ -0.63
HPS3-201ENST00000296051 IGKV1-33P01594 117 aa11.14□□□□□ -0.63
HPS3-201ENST00000296051 PAX9P55771 341 aa11.14□□□□□ -0.63
HPS3-201ENST00000296051 ATP5G2Q06055 141 aa11.14□□□□□ -0.63
HPS3-201ENST00000296051 TCF15Q12870 199 aa11.14□□□□□ -0.63
HPS3-201ENST00000296051 RRN3P1Q2M238 152 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms