RNA–Protein interactions for RNA: ENST00000294816.6

LMX1A-201, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-201ENST00000294816 IFI27L2Q9H2X8 130 aa8.39□□□□□ -1.07
LMX1A-201ENST00000294816 IDI2-AS1Q9NZ38 188 aa8.39□□□□□ -1.07
LMX1A-201ENST00000294816 TRAV8-6A0A0B4J262 113 aa8.39□□□□□ -1.07
LMX1A-201ENST00000294816 PPIAL4DF5H284 164 aa8.39□□□□□ -1.07
LMX1A-201ENST00000294816 PEX7O00628 323 aa8.39□□□□□ -1.07
LMX1A-201ENST00000294816 SAP30O75446 220 aa8.39□□□□□ -1.07
LMX1A-201ENST00000294816 CD46P15529 392 aa8.39□□□□□ -1.07
LMX1A-201ENST00000294816 HOXC12P31275 282 aa8.39□□□□□ -1.07
LMX1A-201ENST00000294816 CNEP1R1Q8N9A8 125 aa8.39□□□□□ -1.07
LMX1A-201ENST00000294816 OR2Z1Q8NG97 314 aa8.39□□□□□ -1.07
LMX1A-201ENST00000294816 PAXXQ9BUH6 204 aa8.39□□□□□ -1.07
LMX1A-201ENST00000294816 JPT1Q9UK76 154 aa8.39□□□□□ -1.07
LMX1A-201ENST00000294816 IGHV1-24A0A0C4DH33 117 aa8.38□□□□□ -1.07
LMX1A-201ENST00000294816 H3BTX0 84 aa8.38□□□□□ -1.07
LMX1A-201ENST00000294816 SLC25A5P05141 298 aaKnown RBP8.38□□□□□ -1.07
LMX1A-201ENST00000294816 HIST1H1EP10412 219 aaKnown RBP8.38□□□□□ -1.07
LMX1A-201ENST00000294816 BPIFB3P59826 476 aa8.38□□□□□ -1.07
LMX1A-201ENST00000294816 OR10W1Q8NGF6 305 aa8.38□□□□□ -1.07
LMX1A-201ENST00000294816 CHEK1O14757 476 aa8.38□□□□□ -1.07
LMX1A-201ENST00000294816 SAA2P0DJI9 122 aaPredicted RBP8.38□□□□□ -1.07
LMX1A-201ENST00000294816 MEOX1P50221 254 aa8.38□□□□□ -1.07
LMX1A-201ENST00000294816 RHOGP84095 191 aa8.38□□□□□ -1.07
LMX1A-201ENST00000294816 C6orf15Q6UXA7 325 aaPredicted RBP8.38□□□□□ -1.07
LMX1A-201ENST00000294816 DEFB125Q8N687 156 aa8.38□□□□□ -1.07
LMX1A-201ENST00000294816 MAP1LC3CQ9BXW4 147 aa8.38□□□□□ -1.07
LMX1A-201ENST00000294816 FNDC4Q9H6D8 234 aaPredicted RBP8.38□□□□□ -1.07
LMX1A-201ENST00000294816 KLF13Q9Y2Y9 288 aaPredicted RBP8.38□□□□□ -1.07
LMX1A-201ENST00000294816 COL6A3P12111 3177 aa8.38□□□□□ -1.07
LMX1A-201ENST00000294816 GAGE10A6NGK3 116 aa8.38□□□□□ -1.07
LMX1A-201ENST00000294816 KIR2DS2P43631 304 aa8.38□□□□□ -1.07
LMX1A-201ENST00000294816 HBBP68871 147 aa8.38□□□□□ -1.07
LMX1A-201ENST00000294816 KLF5Q13887 457 aaPredicted RBP8.38□□□□□ -1.07
LMX1A-201ENST00000294816 RND1Q92730 232 aa8.38□□□□□ -1.07
LMX1A-201ENST00000294816 CSTL1Q9H114 145 aa8.38□□□□□ -1.07
LMX1A-201ENST00000294816 HEATR1Q9H583 2144 aaKnown RBP8.37□□□□□ -1.07
LMX1A-201ENST00000294816 C21orf140B9A014 251 aa8.37□□□□□ -1.07
LMX1A-201ENST00000294816 RTL8BQ17RB0 113 aa8.37□□□□□ -1.07
LMX1A-201ENST00000294816 PPP1R35Q8TAP8 253 aa8.37□□□□□ -1.07
LMX1A-201ENST00000294816 URB1-AS1Q96HZ7 61 aa8.37□□□□□ -1.07
LMX1A-201ENST00000294816 CHRDL1Q9BU40 450 aa8.37□□□□□ -1.07
LMX1A-201ENST00000294816 CALYQ9NYX4 217 aa8.37□□□□□ -1.07
LMX1A-201ENST00000294816 FOXA2Q9Y261 457 aaPredicted RBP8.37□□□□□ -1.07
LMX1A-201ENST00000294816 VWC2LB2RUY7 222 aa8.37□□□□□ -1.07
LMX1A-201ENST00000294816 PRB4P10163 310 aaPredicted RBP8.37□□□□□ -1.07
LMX1A-201ENST00000294816 ARF6P62330 175 aa8.37□□□□□ -1.07
LMX1A-201ENST00000294816 FAM201AQ5SY85 155 aa8.37□□□□□ -1.07
LMX1A-201ENST00000294816 WFDC8Q8IUA0 241 aa8.37□□□□□ -1.07
LMX1A-201ENST00000294816 PRR7Q8TB68 274 aa8.37□□□□□ -1.07
LMX1A-201ENST00000294816 WIPF2Q8TF74 440 aaPredicted RBP8.37□□□□□ -1.07
LMX1A-201ENST00000294816 DAZAP1Q96EP5 407 aaKnown RBP8.37□□□□□ -1.07
LMX1A-201ENST00000294816 SLC25A2Q9BXI2 301 aa8.37□□□□□ -1.07
LMX1A-201ENST00000294816 ZNF576Q9H609 170 aa8.37□□□□□ -1.07
LMX1A-201ENST00000294816 TMEM14BQ9NUH8 114 aa8.37□□□□□ -1.07
LMX1A-201ENST00000294816 CADP27708 2225 aa8.36□□□□□ -1.07
LMX1A-201ENST00000294816 C7orf71A4D174 169 aa8.36□□□□□ -1.07
LMX1A-201ENST00000294816 WISP2O76076 250 aa8.36□□□□□ -1.07
LMX1A-201ENST00000294816 IGHV1-2P23083 117 aa8.36□□□□□ -1.07
LMX1A-201ENST00000294816 GPR183P32249 361 aa8.36□□□□□ -1.07
LMX1A-201ENST00000294816 C10orf113Q5VZT2 155 aa8.36□□□□□ -1.07
LMX1A-201ENST00000294816 RASL11AQ6T310 242 aa8.36□□□□□ -1.07
LMX1A-201ENST00000294816 RBMXL3Q8N7X1 1067 aaKnown RBP8.36□□□□□ -1.07
LMX1A-201ENST00000294816 DEFB108BQ8NET1 73 aa8.36□□□□□ -1.07
LMX1A-201ENST00000294816 ZNRD1Q9P1U0 126 aa8.36□□□□□ -1.07
LMX1A-201ENST00000294816 PEF1Q9UBV8 284 aaKnown RBP8.36□□□□□ -1.07
LMX1A-201ENST00000294816 SSBP2P81877 361 aaPredicted RBP8.36□□□□□ -1.07
LMX1A-201ENST00000294816 CT45A1Q5HYN5 189 aa8.36□□□□□ -1.07
LMX1A-201ENST00000294816 FAM162BQ5T6X4 162 aa8.36□□□□□ -1.07
LMX1A-201ENST00000294816 BPIFA4PQ86YQ2 179 aa8.36□□□□□ -1.07
LMX1A-201ENST00000294816 CT45A3Q8NHU0 189 aa8.36□□□□□ -1.07
LMX1A-201ENST00000294816 SARAFQ96BY9 339 aa8.36□□□□□ -1.07
LMX1A-201ENST00000294816 MBD6Q96DN6 1003 aa8.36□□□□□ -1.07
LMX1A-201ENST00000294816 PRNDQ9UKY0 176 aa8.36□□□□□ -1.07
LMX1A-201ENST00000294816 MED13Q9UHV7 2174 aa8.36□□□□□ -1.07
LMX1A-201ENST00000294816 PGPA6NDG6 321 aa8.36□□□□□ -1.07
LMX1A-201ENST00000294816 ORM2P19652 201 aa8.36□□□□□ -1.07
LMX1A-201ENST00000294816 TMEM177Q53S58 311 aa8.36□□□□□ -1.07
LMX1A-201ENST00000294816 ZNF329Q86UD4 541 aa8.36□□□□□ -1.07
LMX1A-201ENST00000294816 ABCA1O95477 2261 aa8.35□□□□□ -1.07
LMX1A-201ENST00000294816 IGKV1D-17A0A075B6S4 117 aa8.35□□□□□ -1.07
LMX1A-201ENST00000294816 MGST3O14880 152 aa8.35□□□□□ -1.07
LMX1A-201ENST00000294816 CD5LO43866 347 aa8.35□□□□□ -1.07
LMX1A-201ENST00000294816 OR2J3O76001 311 aa8.35□□□□□ -1.07
LMX1A-201ENST00000294816 P01737 135 aa8.35□□□□□ -1.07
LMX1A-201ENST00000294816 HTR1DP28221 377 aa8.35□□□□□ -1.07
LMX1A-201ENST00000294816 FAM120AOSQ5T036 256 aa8.35□□□□□ -1.07
LMX1A-201ENST00000294816 RAB37Q96AX2 223 aa8.35□□□□□ -1.07
LMX1A-201ENST00000294816 HILPDAQ9Y5L2 63 aa8.35□□□□□ -1.07
LMX1A-201ENST00000294816 K7ESF4 209 aa8.35□□□□□ -1.07
LMX1A-201ENST00000294816 IGKV1-16P04430 117 aa8.35□□□□□ -1.07
LMX1A-201ENST00000294816 LOXL3P58215 753 aa8.35□□□□□ -1.07
LMX1A-201ENST00000294816 TMEM164Q5U3C3 297 aa8.35□□□□□ -1.07
LMX1A-201ENST00000294816 NPIPB3Q92617 1050 aa8.35□□□□□ -1.07
LMX1A-201ENST00000294816 FAM167A-AS1Q96KT0 104 aa8.35□□□□□ -1.07
LMX1A-201ENST00000294816 PCNX2A6NKB5 2137 aa8.35□□□□□ -1.07
LMX1A-201ENST00000294816 FAM231BA6NCW3 169 aa8.35□□□□□ -1.07
LMX1A-201ENST00000294816 TMEM238C9JI98 176 aa8.35□□□□□ -1.07
LMX1A-201ENST00000294816 HLA-DRB1P01911 266 aa8.35□□□□□ -1.07
LMX1A-201ENST00000294816 HIST1H1AQ02539 215 aaPredicted RBP8.35□□□□□ -1.07
LMX1A-201ENST00000294816 FAM90A1Q86YD7 464 aa8.35□□□□□ -1.07
LMX1A-201ENST00000294816 PDPNQ86YL7 162 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms