RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 SSTP61278 116 aa12.76□□□□□ -0.37
NCKIPSD-201ENST00000294129 TMEM155Q4W5P6 130 aa12.76□□□□□ -0.37
NCKIPSD-201ENST00000294129 PQLC2Q6ZP29 291 aa12.76□□□□□ -0.37
NCKIPSD-201ENST00000294129 PYYP10082 97 aa12.76□□□□□ -0.37
NCKIPSD-201ENST00000294129 CENPWQ5EE01 88 aa12.76□□□□□ -0.37
NCKIPSD-201ENST00000294129 ACTL10Q5JWF8 245 aa12.76□□□□□ -0.37
NCKIPSD-201ENST00000294129 PDPNQ86YL7 162 aa12.76□□□□□ -0.37
NCKIPSD-201ENST00000294129 MUC15Q8N387 334 aa12.76□□□□□ -0.37
NCKIPSD-201ENST00000294129 IMMP2LQ96T52 175 aa12.76□□□□□ -0.37
NCKIPSD-201ENST00000294129 A8MWP6 167 aa12.75□□□□□ -0.37
NCKIPSD-201ENST00000294129 MOSP00540 346 aa12.75□□□□□ -0.37
NCKIPSD-201ENST00000294129 OR5G3P0C626 314 aa12.75□□□□□ -0.37
NCKIPSD-201ENST00000294129 SLC35B1P78383 322 aa12.75□□□□□ -0.37
NCKIPSD-201ENST00000294129 FXYD3Q14802 87 aa12.75□□□□□ -0.37
NCKIPSD-201ENST00000294129 TNXAQ16473 311 aa12.75□□□□□ -0.37
NCKIPSD-201ENST00000294129 VKORC1Q9BQB6 163 aa12.75□□□□□ -0.37
NCKIPSD-201ENST00000294129 RAXQ9Y2V3 346 aa12.75□□□□□ -0.37
NCKIPSD-201ENST00000294129 A0A1W2PPI3 338 aa12.75□□□□□ -0.37
NCKIPSD-201ENST00000294129 HELTA6NFD8 242 aa12.75□□□□□ -0.37
NCKIPSD-201ENST00000294129 GGTLC3B5MD39 225 aa12.75□□□□□ -0.37
NCKIPSD-201ENST00000294129 CCL21O00585 134 aa12.75□□□□□ -0.37
NCKIPSD-201ENST00000294129 IGLV2-23P01705 113 aa12.75□□□□□ -0.37
NCKIPSD-201ENST00000294129 UBE2L3P68036 154 aaKnown RBP12.75□□□□□ -0.37
NCKIPSD-201ENST00000294129 TMEM167AQ8TBQ9 72 aa12.75□□□□□ -0.37
NCKIPSD-201ENST00000294129 ST6GALNAC6Q969X2 333 aa12.75□□□□□ -0.37
NCKIPSD-201ENST00000294129 TMEM133Q9H2Q1 129 aa12.75□□□□□ -0.37
NCKIPSD-201ENST00000294129 TNFRSF13BO14836 293 aaPredicted RBP12.75□□□□□ -0.37
NCKIPSD-201ENST00000294129 FRMD6-AS1P0C7T7 363 aa12.75□□□□□ -0.37
NCKIPSD-201ENST00000294129 MGST1P10620 155 aaKnown RBP12.75□□□□□ -0.37
NCKIPSD-201ENST00000294129 CBLN1P23435 193 aa12.75□□□□□ -0.37
NCKIPSD-201ENST00000294129 GNG4P50150 75 aa12.75□□□□□ -0.37
NCKIPSD-201ENST00000294129 CDSNQ15517 529 aa12.75□□□□□ -0.37
NCKIPSD-201ENST00000294129 RUSC1-AS1Q66K80 236 aa12.75□□□□□ -0.37
NCKIPSD-201ENST00000294129 OR5AU1Q8NGC0 362 aa12.75□□□□□ -0.37
NCKIPSD-201ENST00000294129 VSTM2AQ8TAG5 236 aa12.75□□□□□ -0.37
NCKIPSD-201ENST00000294129 RNASEH2CQ8TDP1 164 aaKnown RBP12.75□□□□□ -0.37
NCKIPSD-201ENST00000294129 TXNDC17Q9BRA2 123 aa12.75□□□□□ -0.37
NCKIPSD-201ENST00000294129 HRNRQ86YZ3 2850 aaPredicted RBP12.75□□□□□ -0.37
NCKIPSD-201ENST00000294129 GRIFINA4D1Z8 144 aa12.74□□□□□ -0.37
NCKIPSD-201ENST00000294129 COX7A2P2O60397 106 aa12.74□□□□□ -0.37
NCKIPSD-201ENST00000294129 DLX6P56179 175 aa12.74□□□□□ -0.37
NCKIPSD-201ENST00000294129 TCL1AP56279 114 aa12.74□□□□□ -0.37
NCKIPSD-201ENST00000294129 VMA21Q3ZAQ7 101 aa12.74□□□□□ -0.37
NCKIPSD-201ENST00000294129 EAF1Q96JC9 268 aaPredicted RBP12.74□□□□□ -0.37
NCKIPSD-201ENST00000294129 RNASE7Q9H1E1 156 aaKnown RBP12.74□□□□□ -0.37
NCKIPSD-201ENST00000294129 TMEM167BQ9NRX6 74 aa12.74□□□□□ -0.37
NCKIPSD-201ENST00000294129 PPOXP50336 477 aa12.74□□□□□ -0.37
NCKIPSD-201ENST00000294129 CASP6P55212 293 aa12.74□□□□□ -0.37
NCKIPSD-201ENST00000294129 TAS2R45P59539 299 aa12.74□□□□□ -0.37
NCKIPSD-201ENST00000294129 TAS2R60P59551 318 aa12.74□□□□□ -0.37
NCKIPSD-201ENST00000294129 C11orf42Q8N5U0 333 aa12.74□□□□□ -0.37
NCKIPSD-201ENST00000294129 LINC00479Q96M42 142 aa12.74□□□□□ -0.37
NCKIPSD-201ENST00000294129 A0A1W2PN81 502 aa12.73□□□□□ -0.37
NCKIPSD-201ENST00000294129 B9A039 149 aa12.73□□□□□ -0.37
NCKIPSD-201ENST00000294129 SIAH2O43255 324 aa12.73□□□□□ -0.37
NCKIPSD-201ENST00000294129 AREGP15514 252 aa12.73□□□□□ -0.37
NCKIPSD-201ENST00000294129 ORM2P19652 201 aa12.73□□□□□ -0.37
NCKIPSD-201ENST00000294129 HIVEP3Q5T1R4 2406 aa12.73□□□□□ -0.37
NCKIPSD-201ENST00000294129 C8orf88P0DMB2 117 aa12.73□□□□□ -0.37
NCKIPSD-201ENST00000294129 CNN1P51911 297 aaKnown RBP12.73□□□□□ -0.37
NCKIPSD-201ENST00000294129 MRPL41Q8IXM3 137 aaKnown RBP12.73□□□□□ -0.37
NCKIPSD-201ENST00000294129 SLC25A33Q9BSK2 321 aa12.73□□□□□ -0.37
NCKIPSD-201ENST00000294129 GSX1Q9H4S2 264 aaPredicted RBP12.73□□□□□ -0.37
NCKIPSD-201ENST00000294129 ZNF355PQ9NSJ1 428 aa12.73□□□□□ -0.37
NCKIPSD-201ENST00000294129 IGHV2-26A0A0B4J1V2 119 aa12.72□□□□□ -0.37
NCKIPSD-201ENST00000294129 A0A1W2PRD5 423 aa12.72□□□□□ -0.37
NCKIPSD-201ENST00000294129 A0A1W2PRF3 423 aa12.72□□□□□ -0.37
NCKIPSD-201ENST00000294129 A0A1W2PRM7 423 aa12.72□□□□□ -0.37
NCKIPSD-201ENST00000294129 CD99P14209 185 aa12.72□□□□□ -0.37
NCKIPSD-201ENST00000294129 DNAJC4Q9NNZ3 241 aa12.72□□□□□ -0.37
NCKIPSD-201ENST00000294129 SERTAD4Q9NUC0 356 aa12.72□□□□□ -0.37
NCKIPSD-201ENST00000294129 ONECUT1Q9UBC0 465 aa12.72□□□□□ -0.37
NCKIPSD-201ENST00000294129 SSUH2Q9Y2M2 353 aa12.72□□□□□ -0.37
NCKIPSD-201ENST00000294129 INSIG2Q9Y5U4 225 aa12.72□□□□□ -0.37
NCKIPSD-201ENST00000294129 FNDC10F2Z333 226 aa12.72□□□□□ -0.37
NCKIPSD-201ENST00000294129 SSX2Q16385 188 aa12.72□□□□□ -0.37
NCKIPSD-201ENST00000294129 SGK494Q96LW2 274 aa12.72□□□□□ -0.37
NCKIPSD-201ENST00000294129 RPH3ALQ9UNE2 315 aa12.72□□□□□ -0.37
NCKIPSD-201ENST00000294129 PAX1P15863 534 aa12.72□□□□□ -0.37
NCKIPSD-201ENST00000294129 LCN2P80188 198 aa12.72□□□□□ -0.37
NCKIPSD-201ENST00000294129 COA6Q5JTJ3 125 aaKnown RBP12.72□□□□□ -0.37
NCKIPSD-201ENST00000294129 TMEM256Q8N2U0 113 aa12.72□□□□□ -0.37
NCKIPSD-201ENST00000294129 COL12A1Q99715 3063 aa12.71□□□□□ -0.37
NCKIPSD-201ENST00000294129 TYMSP04818 313 aa12.71□□□□□ -0.37
NCKIPSD-201ENST00000294129 ADMP35318 185 aa12.71□□□□□ -0.37
NCKIPSD-201ENST00000294129 SUB1P53999 127 aaKnown RBP eCLIP12.71□□□□□ -0.37
NCKIPSD-201ENST00000294129 C10orf113Q5VZT2 155 aa12.71□□□□□ -0.37
NCKIPSD-201ENST00000294129 OR8I2Q8N0Y5 310 aa12.71□□□□□ -0.37
NCKIPSD-201ENST00000294129 SLC25A2Q9BXI2 301 aa12.71□□□□□ -0.37
NCKIPSD-201ENST00000294129 KAAG1Q9UBP8 84 aa12.71□□□□□ -0.37
NCKIPSD-201ENST00000294129 TRAV34A0A0B4J273 112 aa12.71□□□□□ -0.38
NCKIPSD-201ENST00000294129 H3BTX0 84 aa12.71□□□□□ -0.38
NCKIPSD-201ENST00000294129 RPL15P61313 204 aaKnown RBP12.71□□□□□ -0.38
NCKIPSD-201ENST00000294129 FOXL1Q12952 345 aa12.71□□□□□ -0.38
NCKIPSD-201ENST00000294129 OR1B1Q8NGR6 318 aa12.71□□□□□ -0.38
NCKIPSD-201ENST00000294129 BLNKQ8WV28 456 aa12.71□□□□□ -0.38
NCKIPSD-201ENST00000294129 CACNG8Q8WXS5 425 aa12.71□□□□□ -0.38
NCKIPSD-201ENST00000294129 PPIAL4CA0A0B4J2A2 164 aa12.7□□□□□ -0.38
NCKIPSD-201ENST00000294129 GCGP01275 180 aa12.7□□□□□ -0.38
NCKIPSD-201ENST00000294129 PPIAL4GP0DN37 164 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms