RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 SSBP2P81877 361 aaPredicted RBP12□□□□□ -0.49
CCNF-201ENST00000293968 NUP35Q8NFH5 326 aa12□□□□□ -0.49
CCNF-201ENST00000293968 PRCDQ00LT1 54 aa12□□□□□ -0.49
CCNF-201ENST00000293968 C17orf58Q2M2W7 97 aa12□□□□□ -0.49
CCNF-201ENST00000293968 NUDT10Q8NFP7 164 aa12□□□□□ -0.49
CCNF-201ENST00000293968 NUDT11Q96G61 164 aa12□□□□□ -0.49
CCNF-201ENST00000293968 ADTRPQ96IZ2 230 aa12□□□□□ -0.49
CCNF-201ENST00000293968 PPP1R14DQ9NXH3 145 aa12□□□□□ -0.49
CCNF-201ENST00000293968 TET2Q6N021 2002 aaPredicted RBP12□□□□□ -0.49
CCNF-201ENST00000293968 EP300Q09472 2414 aaPredicted RBP12□□□□□ -0.49
CCNF-201ENST00000293968 FAM181BA6NEQ2 426 aa12□□□□□ -0.49
CCNF-201ENST00000293968 F2RL2O00254 374 aa12□□□□□ -0.49
CCNF-201ENST00000293968 TDGF1P13385 188 aa12□□□□□ -0.49
CCNF-201ENST00000293968 TBR1Q16650 682 aa12□□□□□ -0.49
CCNF-201ENST00000293968 MSMPQ1L6U9 139 aa12□□□□□ -0.49
CCNF-201ENST00000293968 ZNF738Q8NE65 137 aa12□□□□□ -0.49
CCNF-201ENST00000293968 OR1B1Q8NGR6 318 aa12□□□□□ -0.49
CCNF-201ENST00000293968 H1FXQ92522 213 aaKnown RBP12□□□□□ -0.49
CCNF-201ENST00000293968 COL6A3P12111 3177 aa12□□□□□ -0.49
CCNF-201ENST00000293968 APOA2P02652 100 aa12□□□□□ -0.49
CCNF-201ENST00000293968 SRSF6Q13247 344 aaKnown RBP12□□□□□ -0.49
CCNF-201ENST00000293968 SPACA3Q8IXA5 215 aa12□□□□□ -0.49
CCNF-201ENST00000293968 DDB2Q92466 427 aa12□□□□□ -0.49
CCNF-201ENST00000293968 MCRIP2Q9BUT9 160 aaKnown RBP12□□□□□ -0.49
CCNF-201ENST00000293968 SPRY4Q9C004 299 aa12□□□□□ -0.49
CCNF-201ENST00000293968 SAP30LQ9HAJ7 183 aa12□□□□□ -0.49
CCNF-201ENST00000293968 PLCE1Q9P212 2302 aa11.99□□□□□ -0.49
CCNF-201ENST00000293968 A0A1W2PRE2 83 aa11.99□□□□□ -0.49
CCNF-201ENST00000293968 CNOT1A5YKK6 2376 aaKnown RBP11.99□□□□□ -0.49
CCNF-201ENST00000293968 ENSAO43768 121 aaKnown RBP11.99□□□□□ -0.49
CCNF-201ENST00000293968 CSN3P07498 182 aa11.99□□□□□ -0.49
CCNF-201ENST00000293968 SELENOVP59797 346 aa11.99□□□□□ -0.49
CCNF-201ENST00000293968 LEMD1Q68G75 181 aa11.99□□□□□ -0.49
CCNF-201ENST00000293968 INTS1Q8N201 2190 aaKnown RBP11.99□□□□□ -0.49
CCNF-201ENST00000293968 SMIM27A0A1W2PRY6 76 aa11.99□□□□□ -0.49
CCNF-201ENST00000293968 TNFAIP6P98066 277 aaPredicted RBP11.99□□□□□ -0.49
CCNF-201ENST00000293968 AARDQ4LEZ3 155 aa11.99□□□□□ -0.49
CCNF-201ENST00000293968 DAZAP1Q96EP5 407 aaKnown RBP11.99□□□□□ -0.49
CCNF-201ENST00000293968 ZNF835Q9Y2P0 537 aa11.99□□□□□ -0.49
CCNF-201ENST00000293968 PEX7O00628 323 aa11.99□□□□□ -0.49
CCNF-201ENST00000293968 CCL25O15444 150 aa11.99□□□□□ -0.49
CCNF-201ENST00000293968 NDUFB8O95169 186 aa11.99□□□□□ -0.49
CCNF-201ENST00000293968 MOSP00540 346 aa11.99□□□□□ -0.49
CCNF-201ENST00000293968 IGLV2-8P01709 118 aa11.99□□□□□ -0.49
CCNF-201ENST00000293968 CTRLP40313 264 aa11.99□□□□□ -0.49
CCNF-201ENST00000293968 WASHC3Q9Y3C0 194 aa11.99□□□□□ -0.49
CCNF-201ENST00000293968 SARAFQ96BY9 339 aa11.98□□□□□ -0.49
CCNF-201ENST00000293968 PGLYRP4Q96LB8 373 aa11.98□□□□□ -0.49
CCNF-201ENST00000293968 SSUH2Q9Y2M2 353 aa11.98□□□□□ -0.49
CCNF-201ENST00000293968 PKDREJQ9NTG1 2253 aa11.98□□□□□ -0.49
CCNF-201ENST00000293968 CBY3A6NI87 242 aa11.98□□□□□ -0.49
CCNF-201ENST00000293968 CD69Q07108 199 aa11.98□□□□□ -0.49
CCNF-201ENST00000293968 MRPL20Q9BYC9 149 aaKnown RBP11.98□□□□□ -0.49
CCNF-201ENST00000293968 CT45A6P0DMU7 189 aa11.98□□□□□ -0.49
CCNF-201ENST00000293968 CT45A5P0DMU8 189 aa11.98□□□□□ -0.49
CCNF-201ENST00000293968 CT45A7P0DMV0 189 aa11.98□□□□□ -0.49
CCNF-201ENST00000293968 BPIFB3P59826 476 aa11.98□□□□□ -0.49
CCNF-201ENST00000293968 ETFRF1Q6IPR1 90 aa11.98□□□□□ -0.49
CCNF-201ENST00000293968 PDPNQ86YL7 162 aa11.98□□□□□ -0.49
CCNF-201ENST00000293968 FDCSPQ8NFU4 85 aa11.98□□□□□ -0.49
CCNF-201ENST00000293968 RNF7Q9UBF6 113 aa11.98□□□□□ -0.49
CCNF-201ENST00000293968 PGPA6NDG6 321 aa11.97□□□□□ -0.49
CCNF-201ENST00000293968 EBLN2Q6P2I7 272 aa11.97□□□□□ -0.49
CCNF-201ENST00000293968 KIR3DL3Q8N743 410 aa11.97□□□□□ -0.49
CCNF-201ENST00000293968 TPPP3Q9BW30 176 aa11.97□□□□□ -0.49
CCNF-201ENST00000293968 SLC25A2Q9BXI2 301 aa11.97□□□□□ -0.49
CCNF-201ENST00000293968 TRAV9-2A0A087WT02 112 aa11.97□□□□□ -0.49
CCNF-201ENST00000293968 RNASE2P10153 161 aaKnown RBP11.97□□□□□ -0.49
CCNF-201ENST00000293968 CCL8P80075 99 aa11.97□□□□□ -0.49
CCNF-201ENST00000293968 PEAR1Q5VY43 1037 aaPredicted RBP11.97□□□□□ -0.49
CCNF-201ENST00000293968 HCP5Q6MZN7 132 aa11.97□□□□□ -0.49
CCNF-201ENST00000293968 OR10X1Q8NGY0 326 aa11.97□□□□□ -0.49
CCNF-201ENST00000293968 TNFRSF19Q9NS68 423 aa11.97□□□□□ -0.49
CCNF-201ENST00000293968 HSBP1L1C9JCN9 74 aa11.97□□□□□ -0.49
CCNF-201ENST00000293968 CRYABP02511 175 aaKnown RBP11.97□□□□□ -0.49
CCNF-201ENST00000293968 IGLL1P15814 213 aa11.97□□□□□ -0.49
CCNF-201ENST00000293968 MBNL2Q5VZF2 373 aaKnown RBP11.97□□□□□ -0.49
CCNF-201ENST00000293968 GRAMD2BQ96HH9 432 aa11.97□□□□□ -0.49
CCNF-201ENST00000293968 PMCHL2Q9BQD1 86 aa11.97□□□□□ -0.49
CCNF-201ENST00000293968 HIST1H1EP10412 219 aaKnown RBP11.97□□□□□ -0.49
CCNF-201ENST00000293968 LINC00305Q7Z4B0 112 aa11.97□□□□□ -0.49
CCNF-201ENST00000293968 OR1L8Q8NGR8 309 aa11.97□□□□□ -0.49
CCNF-201ENST00000293968 RNASE8Q8TDE3 154 aaKnown RBP11.97□□□□□ -0.49
CCNF-201ENST00000293968 IGF2BP2-AS1Q96M15 143 aa11.97□□□□□ -0.49
CCNF-201ENST00000293968 DLL1O00548 723 aa11.96□□□□□ -0.49
CCNF-201ENST00000293968 GDF5OSQ5U4N7 250 aa11.96□□□□□ -0.49
CCNF-201ENST00000293968 ASCL3Q9NQ33 180 aa11.96□□□□□ -0.49
CCNF-201ENST00000293968 IGHV3-72A0A0B4J1Y9 119 aa11.96□□□□□ -0.5
CCNF-201ENST00000293968 CHEK1O14757 476 aa11.96□□□□□ -0.5
CCNF-201ENST00000293968 LOC102724200A0A096LPH7 203 aaPredicted RBP11.96□□□□□ -0.5
CCNF-201ENST00000293968 hDV102S1A0JD36 115 aa11.96□□□□□ -0.5
CCNF-201ENST00000293968 OR4C46A6NHA9 309 aa11.96□□□□□ -0.5
CCNF-201ENST00000293968 SSX8Q7RTT4 187 aa11.96□□□□□ -0.5
CCNF-201ENST00000293968 ZCCHC24Q8N2G6 241 aaKnown RBP11.96□□□□□ -0.5
CCNF-201ENST00000293968 PRR33A8MZF0 331 aa11.95□□□□□ -0.5
CCNF-201ENST00000293968 CCL3L1P16619 93 aa11.95□□□□□ -0.5
CCNF-201ENST00000293968 FLYWCH2Q96CP2 140 aaKnown RBP11.95□□□□□ -0.5
CCNF-201ENST00000293968 PCNX2A6NKB5 2137 aa11.95□□□□□ -0.5
CCNF-201ENST00000293968 CA7P43166 264 aa11.95□□□□□ -0.5
CCNF-201ENST00000293968 ZNF138P52744 262 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms