RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 NPFFR1Q9GZQ6 430 aa10.6□□□□□ -0.71
PTCD1-201ENST00000292478 DSCR9P59020 149 aa10.6□□□□□ -0.71
PTCD1-201ENST00000292478 COLCA1Q6ZS62 124 aa10.6□□□□□ -0.71
PTCD1-201ENST00000292478 GNB1LQ9BYB4 327 aa10.6□□□□□ -0.71
PTCD1-201ENST00000292478 M0R381 172 aa10.59□□□□□ -0.71
PTCD1-201ENST00000292478 PRSS2P07478 247 aa10.59□□□□□ -0.71
PTCD1-201ENST00000292478 FOXG1P55316 489 aaPredicted RBP10.59□□□□□ -0.71
PTCD1-201ENST00000292478 CACNG7P62955 275 aa10.59□□□□□ -0.71
PTCD1-201ENST00000292478 PARD6GQ9BYG4 376 aaPredicted RBP10.59□□□□□ -0.71
PTCD1-201ENST00000292478 S4R3C0 116 aa10.59□□□□□ -0.71
PTCD1-201ENST00000292478 MBD3L4A6NDZ8 208 aaPredicted RBP10.59□□□□□ -0.71
PTCD1-201ENST00000292478 MBD3L3A6NE82 208 aaPredicted RBP10.59□□□□□ -0.71
PTCD1-201ENST00000292478 MBD3L5A6NJ08 208 aaPredicted RBP10.59□□□□□ -0.71
PTCD1-201ENST00000292478 TREML4Q6UXN2 200 aa10.59□□□□□ -0.71
PTCD1-201ENST00000292478 MBD3L2Q8NHZ7 208 aaPredicted RBP10.59□□□□□ -0.71
PTCD1-201ENST00000292478 TMEM101Q96IK0 257 aa10.59□□□□□ -0.71
PTCD1-201ENST00000292478 LOC105371267A0A1B0GV96 52 aa10.59□□□□□ -0.71
PTCD1-201ENST00000292478 HAX1O00165 279 aa10.59□□□□□ -0.71
PTCD1-201ENST00000292478 STAG3L3P0CL85 134 aa10.59□□□□□ -0.71
PTCD1-201ENST00000292478 SRSF3P84103 164 aaKnown RBP10.59□□□□□ -0.71
PTCD1-201ENST00000292478 ATP5L2Q7Z4Y8 100 aa10.59□□□□□ -0.71
PTCD1-201ENST00000292478 SCGB3A1Q96QR1 104 aa10.59□□□□□ -0.71
PTCD1-201ENST00000292478 DUSP14O95147 198 aaKnown RBP10.59□□□□□ -0.71
PTCD1-201ENST00000292478 PPBPP02775 128 aa10.59□□□□□ -0.71
PTCD1-201ENST00000292478 CDKN1AP38936 164 aa10.59□□□□□ -0.71
PTCD1-201ENST00000292478 OR10J3Q5JRS4 329 aa10.59□□□□□ -0.71
PTCD1-201ENST00000292478 TMEM160Q9NX00 188 aa10.59□□□□□ -0.71
PTCD1-201ENST00000292478 IGHV3-66A0A0C4DH42 116 aa10.58□□□□□ -0.72
PTCD1-201ENST00000292478 MEIG1Q5JSS6 88 aa10.58□□□□□ -0.72
PTCD1-201ENST00000292478 ATOH7Q8N100 152 aa10.58□□□□□ -0.72
PTCD1-201ENST00000292478 ETV2O00321 342 aaPredicted RBP10.58□□□□□ -0.72
PTCD1-201ENST00000292478 TTC9CQ8N5M4 171 aa10.58□□□□□ -0.72
PTCD1-201ENST00000292478 PRSS22Q9GZN4 317 aa10.58□□□□□ -0.72
PTCD1-201ENST00000292478 C9JCJ5 164 aa10.58□□□□□ -0.72
PTCD1-201ENST00000292478 MINOS1Q5TGZ0 78 aa10.58□□□□□ -0.72
PTCD1-201ENST00000292478 TMEM14EPQ6UXP3 125 aa10.58□□□□□ -0.72
PTCD1-201ENST00000292478 C2orf88Q9BSF0 95 aa10.58□□□□□ -0.72
PTCD1-201ENST00000292478 MINOS1-NBL1R4GNA1 71 aa10.58□□□□□ -0.72
PTCD1-201ENST00000292478 C1QTNF9P0C862 333 aa10.58□□□□□ -0.72
PTCD1-201ENST00000292478 LYL1P12980 280 aa10.58□□□□□ -0.72
PTCD1-201ENST00000292478 PSG8Q9UQ74 426 aa10.58□□□□□ -0.72
PTCD1-201ENST00000292478 F11RQ9Y624 299 aaKnown RBP10.58□□□□□ -0.72
PTCD1-201ENST00000292478 CACNA1IQ9P0X4 2223 aa10.58□□□□□ -0.72
PTCD1-201ENST00000292478 TRBV24-1A0A075B6N3 115 aa10.58□□□□□ -0.72
PTCD1-201ENST00000292478 TMEM178BH3BS89 294 aa10.58□□□□□ -0.72
PTCD1-201ENST00000292478 TIMM23O14925 209 aa10.58□□□□□ -0.72
PTCD1-201ENST00000292478 ATRXP46100 2492 aa10.57□□□□□ -0.72
PTCD1-201ENST00000292478 IGHV3-49A0A0A0MS15 119 aa10.57□□□□□ -0.72
PTCD1-201ENST00000292478 H7C2G1 150 aa10.57□□□□□ -0.72
PTCD1-201ENST00000292478 FAM71F2Q6NXP2 309 aa10.57□□□□□ -0.72
PTCD1-201ENST00000292478 Q6P435 159 aa10.57□□□□□ -0.72
PTCD1-201ENST00000292478 PRDM13Q9H4Q3 707 aa10.57□□□□□ -0.72
PTCD1-201ENST00000292478 ABCA7Q8IZY2 2146 aa10.57□□□□□ -0.72
PTCD1-201ENST00000292478 CTAG1AP78358 180 aa10.57□□□□□ -0.72
PTCD1-201ENST00000292478 TEX38Q6PEX7 206 aa10.57□□□□□ -0.72
PTCD1-201ENST00000292478 TMEM167AQ8TBQ9 72 aa10.57□□□□□ -0.72
PTCD1-201ENST00000292478 GGTLC1Q9BX51 225 aa10.57□□□□□ -0.72
PTCD1-201ENST00000292478 RNASE7Q9H1E1 156 aaKnown RBP10.57□□□□□ -0.72
PTCD1-201ENST00000292478 IGHV2-26A0A0B4J1V2 119 aa10.57□□□□□ -0.72
PTCD1-201ENST00000292478 RHOGP84095 191 aa10.57□□□□□ -0.72
PTCD1-201ENST00000292478 LEMD1Q68G75 181 aa10.57□□□□□ -0.72
PTCD1-201ENST00000292478 DUX3Q96PT4 197 aa10.57□□□□□ -0.72
PTCD1-201ENST00000292478 SCN8AQ9UQD0 1980 aa10.57□□□□□ -0.72
PTCD1-201ENST00000292478 TRAV21A0A0B4J279 112 aa10.57□□□□□ -0.72
PTCD1-201ENST00000292478 H3BRM9 83 aa10.57□□□□□ -0.72
PTCD1-201ENST00000292478 PSPNO60542 156 aa10.57□□□□□ -0.72
PTCD1-201ENST00000292478 TGFAP01135 160 aa10.57□□□□□ -0.72
PTCD1-201ENST00000292478 IGKV3-20P01619 116 aa10.57□□□□□ -0.72
PTCD1-201ENST00000292478 IGHV1-8P0DP01 117 aa10.57□□□□□ -0.72
PTCD1-201ENST00000292478 ZNF672Q499Z4 452 aaPredicted RBP10.57□□□□□ -0.72
PTCD1-201ENST00000292478 CD177Q8N6Q3 437 aa10.57□□□□□ -0.72
PTCD1-201ENST00000292478 OCC1Q8TAD7 63 aa10.57□□□□□ -0.72
PTCD1-201ENST00000292478 TSKUQ8WUA8 353 aa10.57□□□□□ -0.72
PTCD1-201ENST00000292478 AHCTF1Q8WYP5 2266 aa10.57□□□□□ -0.72
PTCD1-201ENST00000292478 VWA8A3KMH1 1905 aa10.56□□□□□ -0.72
PTCD1-201ENST00000292478 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.56□□□□□ -0.72
PTCD1-201ENST00000292478 SCGB1A1P11684 91 aa10.56□□□□□ -0.72
PTCD1-201ENST00000292478 KLHDC3Q9BQ90 382 aa10.56□□□□□ -0.72
PTCD1-201ENST00000292478 ADMP35318 185 aa10.56□□□□□ -0.72
PTCD1-201ENST00000292478 GNG5P63218 68 aa10.56□□□□□ -0.72
PTCD1-201ENST00000292478 FHL1Q13642 323 aa10.56□□□□□ -0.72
PTCD1-201ENST00000292478 TMEM170BQ5T4T1 132 aa10.56□□□□□ -0.72
PTCD1-201ENST00000292478 SLC25A48Q6ZT89 311 aaKnown RBP10.56□□□□□ -0.72
PTCD1-201ENST00000292478 DMRTA2Q96SC8 542 aa10.56□□□□□ -0.72
PTCD1-201ENST00000292478 GSN-AS1Q9NRJ2 163 aa10.56□□□□□ -0.72
PTCD1-201ENST00000292478 CACNA1GO43497 2377 aa10.56□□□□□ -0.72
PTCD1-201ENST00000292478 LINC01549A6NIU2 74 aa10.56□□□□□ -0.72
PTCD1-201ENST00000292478 RNASE4P34096 147 aaKnown RBP10.56□□□□□ -0.72
PTCD1-201ENST00000292478 PLAURQ03405 335 aa10.56□□□□□ -0.72
PTCD1-201ENST00000292478 TMEM200BQ69YZ2 307 aa10.56□□□□□ -0.72
PTCD1-201ENST00000292478 LY96Q9Y6Y9 160 aa10.56□□□□□ -0.72
PTCD1-201ENST00000292478 F2Z2F3 143 aa10.56□□□□□ -0.72
PTCD1-201ENST00000292478 OVOL1O14753 267 aa10.56□□□□□ -0.72
PTCD1-201ENST00000292478 SERF1AO75920 110 aa10.56□□□□□ -0.72
PTCD1-201ENST00000292478 TFF1P04155 84 aa10.56□□□□□ -0.72
PTCD1-201ENST00000292478 C1QL4Q86Z23 238 aa10.56□□□□□ -0.72
PTCD1-201ENST00000292478 NRN1Q9NPD7 142 aa10.56□□□□□ -0.72
PTCD1-201ENST00000292478 CHCHD1Q96BP2 118 aaKnown RBP10.55□□□□□ -0.72
PTCD1-201ENST00000292478 TRGV9Q99603 122 aa10.55□□□□□ -0.72
PTCD1-201ENST00000292478 FOXC2Q99958 501 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms