RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 CKS1BP61024 79 aa14.63□□□□□ -0.07
PCDHA13-201ENST00000289272 ZFAND6Q6FIF0 208 aa14.63□□□□□ -0.07
PCDHA13-201ENST00000289272 ARHGEF17Q96PE2 2063 aaPredicted RBP14.63□□□□□ -0.07
PCDHA13-201ENST00000289272 NPIPB11E5RHQ5 1161 aa14.63□□□□□ -0.07
PCDHA13-201ENST00000289272 PDLIM4P50479 330 aa14.63□□□□□ -0.07
PCDHA13-201ENST00000289272 OCIAD2Q56VL3 154 aa14.62□□□□□ -0.07
PCDHA13-201ENST00000289272 TMEM256Q8N2U0 113 aa14.62□□□□□ -0.07
PCDHA13-201ENST00000289272 IGKCP01834 107 aa14.62□□□□□ -0.07
PCDHA13-201ENST00000289272 RHOGP84095 191 aa14.62□□□□□ -0.07
PCDHA13-201ENST00000289272 RPP25LQ8N5L8 163 aaKnown RBP14.62□□□□□ -0.07
PCDHA13-201ENST00000289272 FAM57AQ8TBR7 257 aa14.62□□□□□ -0.07
PCDHA13-201ENST00000289272 IQCF6A8MYZ5 107 aa14.62□□□□□ -0.07
PCDHA13-201ENST00000289272 REG1BP48304 166 aa14.62□□□□□ -0.07
PCDHA13-201ENST00000289272 ZFP36L1Q07352 338 aaKnown RBP14.62□□□□□ -0.07
PCDHA13-201ENST00000289272 ZNF837Q96EG3 531 aaPredicted RBP14.62□□□□□ -0.07
PCDHA13-201ENST00000289272 HILPDAQ9Y5L2 63 aa14.62□□□□□ -0.07
PCDHA13-201ENST00000289272 MYLKQ15746 1914 aa14.62□□□□□ -0.07
PCDHA13-201ENST00000289272 IGKV1D-8A0A087WSZ0 117 aa14.62□□□□□ -0.07
PCDHA13-201ENST00000289272 GAGE12BA1L429 117 aa14.61□□□□□ -0.07
PCDHA13-201ENST00000289272 ATP1A1-AS1Q5TC04 95 aa14.61□□□□□ -0.07
PCDHA13-201ENST00000289272 IFI27L1Q96BM0 104 aa14.61□□□□□ -0.07
PCDHA13-201ENST00000289272 FNDC1Q4ZHG4 1894 aaPredicted RBP14.61□□□□□ -0.07
PCDHA13-201ENST00000289272 TCRBV4S1A1TA0A5B7 111 aa14.61□□□□□ -0.07
PCDHA13-201ENST00000289272 CACNG7P62955 275 aa14.61□□□□□ -0.07
PCDHA13-201ENST00000289272 RPRMLQ8N4K4 120 aa14.61□□□□□ -0.07
PCDHA13-201ENST00000289272 SIGLEC12Q96PQ1 595 aa14.61□□□□□ -0.07
PCDHA13-201ENST00000289272 APOBEC3AP31941 199 aaPredicted RBP14.61□□□□□ -0.07
PCDHA13-201ENST00000289272 GFRA1P56159 465 aa14.61□□□□□ -0.07
PCDHA13-201ENST00000289272 PRCDQ00LT1 54 aa14.61□□□□□ -0.07
PCDHA13-201ENST00000289272 ORMDL2Q53FV1 153 aa14.61□□□□□ -0.07
PCDHA13-201ENST00000289272 ASCL2Q99929 193 aa14.61□□□□□ -0.07
PCDHA13-201ENST00000289272 H7C1H1 209 aa14.6□□□□□ -0.07
PCDHA13-201ENST00000289272 CRYGSP22914 178 aa14.6□□□□□ -0.07
PCDHA13-201ENST00000289272 C19orf54Q5BKX5 351 aa14.6□□□□□ -0.07
PCDHA13-201ENST00000289272 PVRIGQ6DKI7 326 aa14.6□□□□□ -0.07
PCDHA13-201ENST00000289272 ST6GALNAC3Q8NDV1 305 aa14.6□□□□□ -0.07
PCDHA13-201ENST00000289272 KBTBD11-OT1A0A1B0GTJ5 212 aa14.6□□□□□ -0.07
PCDHA13-201ENST00000289272 Q5PR19 223 aa14.6□□□□□ -0.07
PCDHA13-201ENST00000289272 A0A0G2JMM0 328 aa14.6□□□□□ -0.07
PCDHA13-201ENST00000289272 A0A1W2PPB8 328 aa14.6□□□□□ -0.07
PCDHA13-201ENST00000289272 KIR3DP1A8MWS1 328 aa14.6□□□□□ -0.07
PCDHA13-201ENST00000289272 GGTLC1Q9BX51 225 aa14.6□□□□□ -0.07
PCDHA13-201ENST00000289272 PTPRDP23468 1912 aa14.6□□□□□ -0.07
PCDHA13-201ENST00000289272 TRAV8-2A0A0B4J237 113 aa14.6□□□□□ -0.07
PCDHA13-201ENST00000289272 SYS1-DBNDD2H3BUS1 97 aa14.6□□□□□ -0.07
PCDHA13-201ENST00000289272 FOXH1O75593 365 aa14.6□□□□□ -0.07
PCDHA13-201ENST00000289272 CELA3AP09093 270 aa14.6□□□□□ -0.07
PCDHA13-201ENST00000289272 SRSF1Q07955 248 aaKnown RBP eCLIP14.6□□□□□ -0.07
PCDHA13-201ENST00000289272 ZNF585BQ52M93 769 aa14.6□□□□□ -0.07
PCDHA13-201ENST00000289272 TREML4Q6UXN2 200 aa14.6□□□□□ -0.07
PCDHA13-201ENST00000289272 LYPD6BQ8NI32 183 aa14.6□□□□□ -0.07
PCDHA13-201ENST00000289272 NLRC5Q86WI3 1866 aa14.6□□□□□ -0.07
PCDHA13-201ENST00000289272 IGHV3-21A0A0B4J1V1 117 aa14.59□□□□□ -0.07
PCDHA13-201ENST00000289272 LEPP41159 167 aa14.59□□□□□ -0.07
PCDHA13-201ENST00000289272 CD69Q07108 199 aa14.59□□□□□ -0.07
PCDHA13-201ENST00000289272 VKORC1L1Q8N0U8 176 aa14.59□□□□□ -0.07
PCDHA13-201ENST00000289272 TRIOBPQ9H2D6 2365 aa14.59□□□□□ -0.07
PCDHA13-201ENST00000289272 DNAL4O96015 105 aa14.59□□□□□ -0.07
PCDHA13-201ENST00000289272 PRSS2P07478 247 aa14.59□□□□□ -0.07
PCDHA13-201ENST00000289272 YPEL3P61236 119 aaPredicted RBP14.59□□□□□ -0.07
PCDHA13-201ENST00000289272 TPTE2P1Q5T6R2 138 aa14.59□□□□□ -0.07
PCDHA13-201ENST00000289272 EBLN2Q6P2I7 272 aa14.59□□□□□ -0.07
PCDHA13-201ENST00000289272 C17orf82Q86X59 251 aaPredicted RBP14.59□□□□□ -0.07
PCDHA13-201ENST00000289272 CST9LQ9H4G1 147 aa14.59□□□□□ -0.07
PCDHA13-201ENST00000289272 F2Z2F3 143 aa14.59□□□□□ -0.07
PCDHA13-201ENST00000289272 WDR82Q6UXN9 313 aa14.59□□□□□ -0.07
PCDHA13-201ENST00000289272 GFRA4Q9GZZ7 299 aa14.59□□□□□ -0.07
PCDHA13-201ENST00000289272 NTN3O00634 580 aaPredicted RBP14.59□□□□□ -0.07
PCDHA13-201ENST00000289272 SNAI2O43623 268 aa14.59□□□□□ -0.07
PCDHA13-201ENST00000289272 NEU4Q8WWR8 484 aaPredicted RBP14.59□□□□□ -0.07
PCDHA13-201ENST00000289272 YAE1D1Q9NRH1 226 aa14.59□□□□□ -0.07
PCDHA13-201ENST00000289272 KIF26BQ2KJY2 2108 aa14.59□□□□□ -0.07
PCDHA13-201ENST00000289272 TPRP12270 2363 aaKnown RBP14.59□□□□□ -0.07
PCDHA13-201ENST00000289272 RPL39P5Q59GN2 51 aa14.58□□□□□ -0.07
PCDHA13-201ENST00000289272 DYNLRB2Q8TF09 96 aa14.58□□□□□ -0.08
PCDHA13-201ENST00000289272 C9JQL5 133 aa14.58□□□□□ -0.08
PCDHA13-201ENST00000289272 WBP1Q96G27 269 aa14.58□□□□□ -0.08
PCDHA13-201ENST00000289272 ZNF319Q9P2F9 582 aa14.58□□□□□ -0.08
PCDHA13-201ENST00000289272 GAGE2BQ13066 116 aa14.58□□□□□ -0.08
PCDHA13-201ENST00000289272 GAGE2EQ4V326 116 aa14.58□□□□□ -0.08
PCDHA13-201ENST00000289272 RTN4RL2Q86UN3 420 aa14.58□□□□□ -0.08
PCDHA13-201ENST00000289272 OR10W1Q8NGF6 305 aa14.58□□□□□ -0.08
PCDHA13-201ENST00000289272 C18orf15Q96N68 181 aa14.58□□□□□ -0.08
PCDHA13-201ENST00000289272 GAGE2DQ9UEU5 116 aa14.58□□□□□ -0.08
PCDHA13-201ENST00000289272 FOXA2Q9Y261 457 aaPredicted RBP14.58□□□□□ -0.08
PCDHA13-201ENST00000289272 PPIAL4CA0A0B4J2A2 164 aa14.57□□□□□ -0.08
PCDHA13-201ENST00000289272 CLPSP04118 112 aa14.57□□□□□ -0.08
PCDHA13-201ENST00000289272 PPIAL4GP0DN37 164 aa14.57□□□□□ -0.08
PCDHA13-201ENST00000289272 ECSCRQ19T08 205 aa14.57□□□□□ -0.08
PCDHA13-201ENST00000289272 ASCL4Q6XD76 172 aa14.57□□□□□ -0.08
PCDHA13-201ENST00000289272 ARPC1AQ92747 370 aa14.57□□□□□ -0.08
PCDHA13-201ENST00000289272 TRAV8-4A0A0B4J246 113 aa14.57□□□□□ -0.08
PCDHA13-201ENST00000289272 MPV17L2Q567V2 206 aa14.57□□□□□ -0.08
PCDHA13-201ENST00000289272 SVILO95425 2214 aa14.57□□□□□ -0.08
PCDHA13-201ENST00000289272 H3BRM9 83 aa14.57□□□□□ -0.08
PCDHA13-201ENST00000289272 OR9G9P0C7N8 305 aa14.57□□□□□ -0.08
PCDHA13-201ENST00000289272 PRSS8Q16651 343 aa14.57□□□□□ -0.08
PCDHA13-201ENST00000289272 CLEC7AQ9BXN2 247 aa14.57□□□□□ -0.08
PCDHA13-201ENST00000289272 ASIPP42127 132 aa14.57□□□□□ -0.08
PCDHA13-201ENST00000289272 OR13A1Q8NGR1 328 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms