RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 C3orf79P0CE67 100 aa10.74□□□□□ -0.69
SLC28A1-201ENST00000286749 NTF3P20783 257 aa10.74□□□□□ -0.69
SLC28A1-201ENST00000286749 ZNF331Q9NQX6 463 aaPredicted RBP10.74□□□□□ -0.69
SLC28A1-201ENST00000286749 CFAP47Q6ZTR5 3102 aa10.73□□□□□ -0.69
SLC28A1-201ENST00000286749 TRAV34A0A0B4J273 112 aa10.73□□□□□ -0.69
SLC28A1-201ENST00000286749 M0R296 226 aa10.73□□□□□ -0.69
SLC28A1-201ENST00000286749 TM4SF5O14894 197 aa10.73□□□□□ -0.69
SLC28A1-201ENST00000286749 IGHV3-48P01763 117 aa10.73□□□□□ -0.69
SLC28A1-201ENST00000286749 TFPI2P48307 235 aa10.73□□□□□ -0.69
SLC28A1-201ENST00000286749 ZNF714Q96N38 554 aa10.73□□□□□ -0.69
SLC28A1-201ENST00000286749 NDUFA4L2Q9NRX3 87 aa10.73□□□□□ -0.69
SLC28A1-201ENST00000286749 ZNF355PQ9NSJ1 428 aa10.73□□□□□ -0.69
SLC28A1-201ENST00000286749 AMMECR1Q9Y4X0 333 aaPredicted RBP10.73□□□□□ -0.69
SLC28A1-201ENST00000286749 COX7A2P2O60397 106 aa10.73□□□□□ -0.69
SLC28A1-201ENST00000286749 REG1BP48304 166 aa10.73□□□□□ -0.69
SLC28A1-201ENST00000286749 ZNF833PQ6ZTB9 187 aa10.73□□□□□ -0.69
SLC28A1-201ENST00000286749 WNT10AQ9GZT5 417 aa10.73□□□□□ -0.69
SLC28A1-201ENST00000286749 BOD1L1Q8NFC6 3051 aa10.73□□□□□ -0.69
SLC28A1-201ENST00000286749 APOA2P02652 100 aa10.72□□□□□ -0.69
SLC28A1-201ENST00000286749 RPL8P62917 257 aaKnown RBP10.72□□□□□ -0.69
SLC28A1-201ENST00000286749 ERHP84090 104 aaKnown RBP10.72□□□□□ -0.69
SLC28A1-201ENST00000286749 DEFB109BQ30KR1 87 aa10.72□□□□□ -0.69
SLC28A1-201ENST00000286749 OSR1Q8TAX0 266 aaPredicted RBP10.72□□□□□ -0.69
SLC28A1-201ENST00000286749 C18orf32Q8TCD1 76 aa10.72□□□□□ -0.69
SLC28A1-201ENST00000286749 CACNG8Q8WXS5 425 aa10.72□□□□□ -0.69
SLC28A1-201ENST00000286749 PAXXQ9BUH6 204 aa10.72□□□□□ -0.69
SLC28A1-201ENST00000286749 COL25A1Q9BXS0 654 aaPredicted RBP10.72□□□□□ -0.69
SLC28A1-201ENST00000286749 hADV38S2A0JD32 116 aa10.72□□□□□ -0.69
SLC28A1-201ENST00000286749 DPRXA6NFQ7 191 aa10.72□□□□□ -0.69
SLC28A1-201ENST00000286749 PRRX1P54821 245 aa10.72□□□□□ -0.69
SLC28A1-201ENST00000286749 MFAP2P55001 183 aa10.72□□□□□ -0.69
SLC28A1-201ENST00000286749 SELENOVP59797 346 aa10.72□□□□□ -0.69
SLC28A1-201ENST00000286749 GAGE1Q13065 139 aa10.72□□□□□ -0.69
SLC28A1-201ENST00000286749 MMDQ15546 238 aa10.72□□□□□ -0.69
SLC28A1-201ENST00000286749 ZNF329Q86UD4 541 aa10.72□□□□□ -0.69
SLC28A1-201ENST00000286749 MBD6Q96DN6 1003 aa10.72□□□□□ -0.69
SLC28A1-201ENST00000286749 RP1L1Q8IWN7 2480 aaPredicted RBP10.72□□□□□ -0.69
SLC28A1-201ENST00000286749 H0YJW9 148 aa10.71□□□□□ -0.69
SLC28A1-201ENST00000286749 PEX7O00628 323 aa10.71□□□□□ -0.69
SLC28A1-201ENST00000286749 TMEM30BQ3MIR4 351 aa10.71□□□□□ -0.69
SLC28A1-201ENST00000286749 C10orf55Q5SWW7 151 aa10.71□□□□□ -0.69
SLC28A1-201ENST00000286749 GDF5OSQ5U4N7 250 aa10.71□□□□□ -0.69
SLC28A1-201ENST00000286749 C10orf113Q5VZT2 155 aa10.71□□□□□ -0.69
SLC28A1-201ENST00000286749 PRR27Q6MZM9 219 aa10.71□□□□□ -0.69
SLC28A1-201ENST00000286749 PATE2Q6UY27 113 aa10.71□□□□□ -0.69
SLC28A1-201ENST00000286749 C22orf34Q6ZV56 151 aa10.71□□□□□ -0.69
SLC28A1-201ENST00000286749 ATOH7Q8N100 152 aa10.71□□□□□ -0.69
SLC28A1-201ENST00000286749 FNDC4Q9H6D8 234 aaPredicted RBP10.71□□□□□ -0.69
SLC28A1-201ENST00000286749 PPIAL4AQ9Y536 164 aa10.71□□□□□ -0.69
SLC28A1-201ENST00000286749 FAM215AQ9Y5M1 114 aa10.71□□□□□ -0.69
SLC28A1-201ENST00000286749 PLXNB1O43157 2135 aa10.71□□□□□ -0.69
SLC28A1-201ENST00000286749 HYPMO75409 117 aa10.71□□□□□ -0.69
SLC28A1-201ENST00000286749 CCL3L1P16619 93 aa10.71□□□□□ -0.69
SLC28A1-201ENST00000286749 WT1-ASQ06250 92 aa10.71□□□□□ -0.69
SLC28A1-201ENST00000286749 COL5A1-AS1Q5SY13 56 aa10.71□□□□□ -0.69
SLC28A1-201ENST00000286749 NPIPB3Q92617 1050 aa10.71□□□□□ -0.69
SLC28A1-201ENST00000286749 BORCS7Q96B45 105 aa10.71□□□□□ -0.69
SLC28A1-201ENST00000286749 UQCR10Q9UDW1 63 aa10.71□□□□□ -0.69
SLC28A1-201ENST00000286749 LINC00312Q9Y6C7 94 aa10.71□□□□□ -0.69
SLC28A1-201ENST00000286749 PLAUP00749 431 aa10.71□□□□□ -0.7
SLC28A1-201ENST00000286749 IGLC2P0DOY2 106 aa10.71□□□□□ -0.7
SLC28A1-201ENST00000286749 IGLC3P0DOY3 106 aa10.71□□□□□ -0.7
SLC28A1-201ENST00000286749 TNFSF4P23510 183 aa10.71□□□□□ -0.7
SLC28A1-201ENST00000286749 SPACA3Q8IXA5 215 aa10.71□□□□□ -0.7
SLC28A1-201ENST00000286749 NUP35Q8NFH5 326 aa10.71□□□□□ -0.7
SLC28A1-201ENST00000286749 NUDT10Q8NFP7 164 aa10.71□□□□□ -0.7
SLC28A1-201ENST00000286749 WIPF2Q8TF74 440 aaPredicted RBP10.71□□□□□ -0.7
SLC28A1-201ENST00000286749 NUDT11Q96G61 164 aa10.71□□□□□ -0.7
SLC28A1-201ENST00000286749 TXN2Q99757 166 aa10.71□□□□□ -0.7
SLC28A1-201ENST00000286749 ZNF430Q9H8G1 570 aaPredicted RBP10.71□□□□□ -0.7
SLC28A1-201ENST00000286749 CGB1A6NKQ9 187 aa10.7□□□□□ -0.7
SLC28A1-201ENST00000286749 REG1AP05451 166 aa10.7□□□□□ -0.7
SLC28A1-201ENST00000286749 GNG5P63218 68 aa10.7□□□□□ -0.7
SLC28A1-201ENST00000286749 CCL8P80075 99 aa10.7□□□□□ -0.7
SLC28A1-201ENST00000286749 TBR1Q16650 682 aa10.7□□□□□ -0.7
SLC28A1-201ENST00000286749 LCN12Q6JVE5 192 aa10.7□□□□□ -0.7
SLC28A1-201ENST00000286749 Q6ZN92 141 aa10.7□□□□□ -0.7
SLC28A1-201ENST00000286749 C19orf35Q6ZS72 473 aa10.7□□□□□ -0.7
SLC28A1-201ENST00000286749 FAM231DQ6ZW35 169 aa10.7□□□□□ -0.7
SLC28A1-201ENST00000286749 FLYWCH2Q96CP2 140 aaKnown RBP10.7□□□□□ -0.7
SLC28A1-201ENST00000286749 GRAMD2BQ96HH9 432 aa10.7□□□□□ -0.7
SLC28A1-201ENST00000286749 ASCL3Q9NQ33 180 aa10.7□□□□□ -0.7
SLC28A1-201ENST00000286749 MRPL36Q9P0J6 103 aaKnown RBP10.7□□□□□ -0.7
SLC28A1-201ENST00000286749 DIAPH2-AS1Q14236 149 aa10.7□□□□□ -0.7
SLC28A1-201ENST00000286749 TNXAQ16473 311 aa10.7□□□□□ -0.7
SLC28A1-201ENST00000286749 MAJINQ3KP22 176 aa10.7□□□□□ -0.7
SLC28A1-201ENST00000286749 TEX36Q5VZQ5 186 aa10.7□□□□□ -0.7
SLC28A1-201ENST00000286749 OR1L4Q8NGR5 311 aa10.7□□□□□ -0.7
SLC28A1-201ENST00000286749 FXYD5Q96DB9 178 aa10.7□□□□□ -0.7
SLC28A1-201ENST00000286749 SSBP4Q9BWG4 385 aaPredicted RBP10.7□□□□□ -0.7
SLC28A1-201ENST00000286749 GAL3ST2Q9H3Q3 398 aa10.7□□□□□ -0.7
SLC28A1-201ENST00000286749 MRPL27Q9P0M9 148 aaKnown RBP10.7□□□□□ -0.7
SLC28A1-201ENST00000286749 IGKV1D-37A0A075B6S9 117 aa10.69□□□□□ -0.7
SLC28A1-201ENST00000286749 TCRBV4S1A1TA0A5B7 111 aa10.69□□□□□ -0.7
SLC28A1-201ENST00000286749 CORTO00230 105 aa10.69□□□□□ -0.7
SLC28A1-201ENST00000286749 BTF3P20290 206 aaKnown RBP10.69□□□□□ -0.7
SLC28A1-201ENST00000286749 GPR6P46095 362 aaPredicted RBP10.69□□□□□ -0.7
SLC28A1-201ENST00000286749 BPIFB3P59826 476 aa10.69□□□□□ -0.7
SLC28A1-201ENST00000286749 C3orf36Q3SXR2 165 aa10.69□□□□□ -0.7
SLC28A1-201ENST00000286749 TMEM177Q53S58 311 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms