RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 DKK4Q9UBT3 224 aa8.5□□□□□ -1.05
SKA1-201ENST00000285116 POLQO75417 2590 aa8.5□□□□□ -1.05
SKA1-201ENST00000285116 CHD6Q8TD26 2715 aa8.5□□□□□ -1.05
SKA1-201ENST00000285116 ISLRO14498 428 aa8.5□□□□□ -1.05
SKA1-201ENST00000285116 LHBP01229 141 aa8.5□□□□□ -1.05
SKA1-201ENST00000285116 LINC00869P0C866 280 aa8.5□□□□□ -1.05
SKA1-201ENST00000285116 HSPE1P61604 102 aaKnown RBP8.5□□□□□ -1.05
SKA1-201ENST00000285116 ARG2P78540 354 aa8.5□□□□□ -1.05
SKA1-201ENST00000285116 LRRC10Q5BKY1 277 aa8.5□□□□□ -1.05
SKA1-201ENST00000285116 CXorf67Q86X51 503 aaPredicted RBP8.5□□□□□ -1.05
SKA1-201ENST00000285116 SLC24A4Q8NFF2 622 aa8.5□□□□□ -1.05
SKA1-201ENST00000285116 FAM222BQ8WU58 562 aa8.5□□□□□ -1.05
SKA1-201ENST00000285116 TMEM167BQ9NRX6 74 aa8.5□□□□□ -1.05
SKA1-201ENST00000285116 DSCAML1Q8TD84 2053 aa8.5□□□□□ -1.05
SKA1-201ENST00000285116 H0YJW9 148 aa8.5□□□□□ -1.05
SKA1-201ENST00000285116 LINC00205P59089 165 aa8.5□□□□□ -1.05
SKA1-201ENST00000285116 TIGITQ495A1 244 aa8.5□□□□□ -1.05
SKA1-201ENST00000285116 LCN12Q6JVE5 192 aa8.5□□□□□ -1.05
SKA1-201ENST00000285116 STPG3Q8N7X2 389 aa8.5□□□□□ -1.05
SKA1-201ENST00000285116 SEPSECSQ9HD40 501 aaKnown RBP8.5□□□□□ -1.05
SKA1-201ENST00000285116 GNG12Q9UBI6 72 aa8.5□□□□□ -1.05
SKA1-201ENST00000285116 FASNP49327 2511 aaKnown RBP8.49□□□□□ -1.05
SKA1-201ENST00000285116 SMIM27A0A1W2PRY6 76 aa8.49□□□□□ -1.05
SKA1-201ENST00000285116 NPY1RP25929 384 aa8.49□□□□□ -1.05
SKA1-201ENST00000285116 TBR1Q16650 682 aa8.49□□□□□ -1.05
SKA1-201ENST00000285116 PQLC2Q6ZP29 291 aa8.49□□□□□ -1.05
SKA1-201ENST00000285116 C18orf32Q8TCD1 76 aa8.49□□□□□ -1.05
SKA1-201ENST00000285116 VPS25Q9BRG1 176 aa8.49□□□□□ -1.05
SKA1-201ENST00000285116 RNASE7Q9H1E1 156 aaKnown RBP8.49□□□□□ -1.05
SKA1-201ENST00000285116 IL19Q9UHD0 177 aa8.49□□□□□ -1.05
SKA1-201ENST00000285116 LRRK2Q5S007 2527 aa8.49□□□□□ -1.05
SKA1-201ENST00000285116 TANC2Q9HCD6 1990 aa8.49□□□□□ -1.05
SKA1-201ENST00000285116 IGHV1-18A0A0C4DH31 117 aa8.49□□□□□ -1.05
SKA1-201ENST00000285116 DEFB108AA8MXU0 73 aa8.49□□□□□ -1.05
SKA1-201ENST00000285116 HSBP1O75506 76 aa8.49□□□□□ -1.05
SKA1-201ENST00000285116 IGLL1P15814 213 aa8.49□□□□□ -1.05
SKA1-201ENST00000285116 GATA4P43694 442 aa8.49□□□□□ -1.05
SKA1-201ENST00000285116 CCL11P51671 97 aa8.49□□□□□ -1.05
SKA1-201ENST00000285116 SLC35B1P78383 322 aa8.49□□□□□ -1.05
SKA1-201ENST00000285116 SPATA31B1PQ5VZV4 182 aa8.49□□□□□ -1.05
SKA1-201ENST00000285116 MRPL54Q6P161 138 aaKnown RBP8.49□□□□□ -1.05
SKA1-201ENST00000285116 DOLPP1Q86YN1 238 aa8.49□□□□□ -1.05
SKA1-201ENST00000285116 OR8B3Q8NGG8 313 aa8.49□□□□□ -1.05
SKA1-201ENST00000285116 RFESDQ8TAC1 157 aa8.49□□□□□ -1.05
SKA1-201ENST00000285116 SSMEM1Q8WWF3 244 aa8.49□□□□□ -1.05
SKA1-201ENST00000285116 FAM122AQ96E09 287 aa8.49□□□□□ -1.05
SKA1-201ENST00000285116 OR8B2Q96RD0 313 aa8.49□□□□□ -1.05
SKA1-201ENST00000285116 CALYQ9NYX4 217 aa8.49□□□□□ -1.05
SKA1-201ENST00000285116 VPS13CQ709C8 3753 aa8.49□□□□□ -1.05
SKA1-201ENST00000285116 FAM181BA6NEQ2 426 aa8.48□□□□□ -1.05
SKA1-201ENST00000285116 CBY3A6NI87 242 aa8.48□□□□□ -1.05
SKA1-201ENST00000285116 IGHV3-13P01766 116 aa8.48□□□□□ -1.05
SKA1-201ENST00000285116 ZNF134P52741 427 aa8.48□□□□□ -1.05
SKA1-201ENST00000285116 TCL1AP56279 114 aa8.48□□□□□ -1.05
SKA1-201ENST00000285116 FXYD3Q14802 87 aa8.48□□□□□ -1.05
SKA1-201ENST00000285116 RASL11AQ6T310 242 aa8.48□□□□□ -1.05
SKA1-201ENST00000285116 TPRX1Q8N7U7 411 aa8.48□□□□□ -1.05
SKA1-201ENST00000285116 DCTN5Q9BTE1 182 aa8.48□□□□□ -1.05
SKA1-201ENST00000285116 CST9LQ9H4G1 147 aa8.48□□□□□ -1.05
SKA1-201ENST00000285116 ZNF331Q9NQX6 463 aaPredicted RBP8.48□□□□□ -1.05
SKA1-201ENST00000285116 PRNDQ9UKY0 176 aa8.48□□□□□ -1.05
SKA1-201ENST00000285116 IGSF10Q6WRI0 2623 aa8.48□□□□□ -1.05
SKA1-201ENST00000285116 IZUMO1RA6ND01 250 aa8.48□□□□□ -1.05
SKA1-201ENST00000285116 A6NJY4 79 aa8.48□□□□□ -1.05
SKA1-201ENST00000285116 INS-IGF2F8WCM5 200 aa8.48□□□□□ -1.05
SKA1-201ENST00000285116 M0QZ24 198 aa8.48□□□□□ -1.05
SKA1-201ENST00000285116 FOXH1O75593 365 aa8.48□□□□□ -1.05
SKA1-201ENST00000285116 CGAP01215 116 aa8.48□□□□□ -1.05
SKA1-201ENST00000285116 USF1P22415 310 aaPredicted RBP8.48□□□□□ -1.05
SKA1-201ENST00000285116 CRYBB3P26998 211 aa8.48□□□□□ -1.05
SKA1-201ENST00000285116 BPIFB3P59826 476 aa8.48□□□□□ -1.05
SKA1-201ENST00000285116 UBE2G1P62253 170 aa8.48□□□□□ -1.05
SKA1-201ENST00000285116 C17orf58Q2M2W7 97 aa8.48□□□□□ -1.05
SKA1-201ENST00000285116 OCIAD2Q56VL3 154 aa8.48□□□□□ -1.05
SKA1-201ENST00000285116 ABHD12Q8N2K0 398 aa8.48□□□□□ -1.05
SKA1-201ENST00000285116 TRIB1Q96RU8 372 aa8.48□□□□□ -1.05
SKA1-201ENST00000285116 TRAV3A0A0B4J244 114 aa8.47□□□□□ -1.05
SKA1-201ENST00000285116 IGHV3-64DA0A0J9YX35 117 aa8.47□□□□□ -1.05
SKA1-201ENST00000285116 M0R2Z0 102 aa8.47□□□□□ -1.05
SKA1-201ENST00000285116 TFF1P04155 84 aa8.47□□□□□ -1.05
SKA1-201ENST00000285116 TNXAQ16473 311 aa8.47□□□□□ -1.05
SKA1-201ENST00000285116 Q56UQ5 140 aa8.47□□□□□ -1.05
SKA1-201ENST00000285116 RPL39P5Q59GN2 51 aa8.47□□□□□ -1.05
SKA1-201ENST00000285116 IBA57Q5T440 356 aaKnown RBP8.47□□□□□ -1.05
SKA1-201ENST00000285116 OR4A47Q6IF82 309 aa8.47□□□□□ -1.05
SKA1-201ENST00000285116 WIPF2Q8TF74 440 aaPredicted RBP8.47□□□□□ -1.05
SKA1-201ENST00000285116 ZNF71Q9NQZ8 489 aaPredicted RBP8.47□□□□□ -1.05
SKA1-201ENST00000285116 IDI2-AS1Q9NZ38 188 aa8.47□□□□□ -1.05
SKA1-201ENST00000285116 DUSP13Q9UII6 198 aa8.47□□□□□ -1.05
SKA1-201ENST00000285116 AGFG2O95081 481 aa8.47□□□□□ -1.05
SKA1-201ENST00000285116 PRCDQ00LT1 54 aa8.47□□□□□ -1.05
SKA1-201ENST00000285116 LDLRAD2Q5SZI1 272 aa8.47□□□□□ -1.05
SKA1-201ENST00000285116 EBLN2Q6P2I7 272 aa8.47□□□□□ -1.05
SKA1-201ENST00000285116 C9orf106Q8NAJ2 232 aa8.47□□□□□ -1.05
SKA1-201ENST00000285116 NUDT10Q8NFP7 164 aa8.47□□□□□ -1.05
SKA1-201ENST00000285116 SARAFQ96BY9 339 aa8.47□□□□□ -1.05
SKA1-201ENST00000285116 SLC25A15Q9Y619 301 aa8.47□□□□□ -1.05
SKA1-201ENST00000285116 KBTBD11-OT1A0A1B0GTJ5 212 aa8.47□□□□□ -1.05
SKA1-201ENST00000285116 NHLH1Q02575 133 aa8.47□□□□□ -1.05
SKA1-201ENST00000285116 SLAQ13239 276 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms