RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 NKX2-5P52952 324 aaPredicted RBP16.9■□□□□ 0.3
PDLIM3-203ENST00000284771 BAXQ07812 192 aa16.9■□□□□ 0.3
PDLIM3-203ENST00000284771 GAMTQ14353 236 aa16.9■□□□□ 0.3
PDLIM3-203ENST00000284771 LGALSLQ3ZCW2 172 aaPredicted RBP16.9■□□□□ 0.3
PDLIM3-203ENST00000284771 OR4X2Q8NGF9 303 aa16.9■□□□□ 0.3
PDLIM3-203ENST00000284771 IGHV3-11P01762 117 aa16.89■□□□□ 0.29
PDLIM3-203ENST00000284771 GPX4P36969 197 aaPredicted RBP16.89■□□□□ 0.29
PDLIM3-203ENST00000284771 ATP5G2Q06055 141 aa16.89■□□□□ 0.29
PDLIM3-203ENST00000284771 SLC38A11Q08AI6 406 aa16.89■□□□□ 0.29
PDLIM3-203ENST00000284771 C18orf65Q6ZTR6 163 aa16.89■□□□□ 0.29
PDLIM3-203ENST00000284771 SLC16A13Q7RTY0 426 aa16.89■□□□□ 0.29
PDLIM3-203ENST00000284771 WFDC12Q8WWY7 111 aa16.89■□□□□ 0.29
PDLIM3-203ENST00000284771 CACNG8Q8WXS5 425 aa16.89■□□□□ 0.29
PDLIM3-203ENST00000284771 USMG5Q96IX5 58 aa16.89■□□□□ 0.29
PDLIM3-203ENST00000284771 CCDC140Q96MF4 163 aa16.89■□□□□ 0.29
PDLIM3-203ENST00000284771 SMIM3Q9BZL3 60 aa16.89■□□□□ 0.29
PDLIM3-203ENST00000284771 COL6A5A8TX70 2615 aa16.89■□□□□ 0.29
PDLIM3-203ENST00000284771 BOLA2-SMG1P6H3BVE0 249 aa16.88■□□□□ 0.29
PDLIM3-203ENST00000284771 S100A11P31949 105 aa16.88■□□□□ 0.29
PDLIM3-203ENST00000284771 LAMTOR1Q6IAA8 161 aa16.88■□□□□ 0.29
PDLIM3-203ENST00000284771 ZNF502Q8TBZ5 544 aa16.88■□□□□ 0.29
PDLIM3-203ENST00000284771 VN1R17PQ8TDU5 208 aa16.88■□□□□ 0.29
PDLIM3-203ENST00000284771 CITED2Q99967 270 aaPredicted RBP16.88■□□□□ 0.29
PDLIM3-203ENST00000284771 GNB4Q9HAV0 340 aa16.88■□□□□ 0.29
PDLIM3-203ENST00000284771 WFDC1Q9HC57 220 aa16.88■□□□□ 0.29
PDLIM3-203ENST00000284771 ZC4H2Q9NQZ6 224 aa16.88■□□□□ 0.29
PDLIM3-203ENST00000284771 CLINT1Q14677 625 aa16.88■□□□□ 0.29
PDLIM3-203ENST00000284771 UBE2E2Q96LR5 201 aa16.88■□□□□ 0.29
PDLIM3-203ENST00000284771 C21orf62Q9NYP8 219 aa16.88■□□□□ 0.29
PDLIM3-203ENST00000284771 IGKV1OR2-108A0A075B7D4 117 aa16.87■□□□□ 0.29
PDLIM3-203ENST00000284771 NUP62P37198 522 aaPredicted RBP16.87■□□□□ 0.29
PDLIM3-203ENST00000284771 HBG1P69891 147 aa16.87■□□□□ 0.29
PDLIM3-203ENST00000284771 HBG2P69892 147 aa16.87■□□□□ 0.29
PDLIM3-203ENST00000284771 DLK1P80370 383 aa16.87■□□□□ 0.29
PDLIM3-203ENST00000284771 ZNF345Q14585 488 aa16.87■□□□□ 0.29
PDLIM3-203ENST00000284771 TMEM116Q8NCL8 245 aa16.87■□□□□ 0.29
PDLIM3-203ENST00000284771 NPIPB3Q92617 1050 aa16.87■□□□□ 0.29
PDLIM3-203ENST00000284771 CXorf58Q96LI9 332 aa16.87■□□□□ 0.29
PDLIM3-203ENST00000284771 OR5B12Q96R08 314 aa16.87■□□□□ 0.29
PDLIM3-203ENST00000284771 FBXL17Q9UF56 701 aa16.87■□□□□ 0.29
PDLIM3-203ENST00000284771 A0A0G2JLM5 398 aa16.86■□□□□ 0.29
PDLIM3-203ENST00000284771 RND2P52198 227 aa16.86■□□□□ 0.29
PDLIM3-203ENST00000284771 VWC2Q2TAL6 325 aa16.86■□□□□ 0.29
PDLIM3-203ENST00000284771 ETFRF1Q6IPR1 90 aa16.86■□□□□ 0.29
PDLIM3-203ENST00000284771 KCNRGQ8N5I3 272 aa16.86■□□□□ 0.29
PDLIM3-203ENST00000284771 OR1S2Q8NGQ3 325 aa16.86■□□□□ 0.29
PDLIM3-203ENST00000284771 ACY3Q96HD9 319 aa16.86■□□□□ 0.29
PDLIM3-203ENST00000284771 GGACTQ9BVM4 153 aa16.86■□□□□ 0.29
PDLIM3-203ENST00000284771 RPS10-NUDT3A0A1W2PQS6 291 aa16.85■□□□□ 0.29
PDLIM3-203ENST00000284771 TRBV12-3P01733 135 aa16.85■□□□□ 0.29
PDLIM3-203ENST00000284771 CDX1P47902 265 aaPredicted RBP16.85■□□□□ 0.29
PDLIM3-203ENST00000284771 OR2F1Q13607 317 aa16.85■□□□□ 0.29
PDLIM3-203ENST00000284771 ZNF343Q6P1L6 599 aa16.85■□□□□ 0.29
PDLIM3-203ENST00000284771 ACSM6Q6P461 480 aa16.85■□□□□ 0.29
PDLIM3-203ENST00000284771 TREML4Q6UXN2 200 aa16.85■□□□□ 0.29
PDLIM3-203ENST00000284771 C9orf62Q8N4C0 152 aa16.85■□□□□ 0.29
PDLIM3-203ENST00000284771 UBAC2Q8NBM4 344 aa16.85■□□□□ 0.29
PDLIM3-203ENST00000284771 OR4X1Q8NH49 305 aa16.85■□□□□ 0.29
PDLIM3-203ENST00000284771 TCRBV4S1A1TA0A5B7 111 aa16.85■□□□□ 0.29
PDLIM3-203ENST00000284771 CLEC3BP05452 202 aa16.85■□□□□ 0.29
PDLIM3-203ENST00000284771 LILRB2Q8N423 598 aa16.85■□□□□ 0.29
PDLIM3-203ENST00000284771 TMEM158Q8WZ71 300 aa16.85■□□□□ 0.29
PDLIM3-203ENST00000284771 EEF1AKMT3Q96AZ1 226 aa16.85■□□□□ 0.29
PDLIM3-203ENST00000284771 TRBV7-1A0A0A6YYK4 115 aa16.84■□□□□ 0.29
PDLIM3-203ENST00000284771 FCGR2BP31994 310 aaPredicted RBP16.84■□□□□ 0.29
PDLIM3-203ENST00000284771 MFAP4P55083 255 aa16.84■□□□□ 0.29
PDLIM3-203ENST00000284771 CLEC19AQ6UXS0 136 aa16.84■□□□□ 0.29
PDLIM3-203ENST00000284771 IGKV1D-37A0A075B6S9 117 aa16.83■□□□□ 0.28
PDLIM3-203ENST00000284771 SMCO3A2RU48 225 aa16.83■□□□□ 0.28
PDLIM3-203ENST00000284771 OR2T8A6NH00 312 aa16.83■□□□□ 0.28
PDLIM3-203ENST00000284771 ADARB2-AS1A8MUL3 147 aa16.83■□□□□ 0.28
PDLIM3-203ENST00000284771 FNDC10F2Z333 226 aa16.83■□□□□ 0.28
PDLIM3-203ENST00000284771 I3L521 148 aa16.83■□□□□ 0.28
PDLIM3-203ENST00000284771 SCAF4O95104 1147 aaKnown RBP16.83■□□□□ 0.28
PDLIM3-203ENST00000284771 CTSGP08311 255 aa16.83■□□□□ 0.28
PDLIM3-203ENST00000284771 ATP6V1FQ16864 119 aa16.83■□□□□ 0.28
PDLIM3-203ENST00000284771 SLC35E1Q96K37 410 aa16.83■□□□□ 0.28
PDLIM3-203ENST00000284771 NPVFQ9HCQ7 196 aa16.83■□□□□ 0.28
PDLIM3-203ENST00000284771 CYTL1Q9NRR1 136 aa16.83■□□□□ 0.28
PDLIM3-203ENST00000284771 UQCC1Q9NVA1 299 aa16.83■□□□□ 0.28
PDLIM3-203ENST00000284771 STAB1Q9NY15 2570 aa16.82■□□□□ 0.28
PDLIM3-203ENST00000284771 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.82■□□□□ 0.28
PDLIM3-203ENST00000284771 A0A0D9SG52 128 aa16.82■□□□□ 0.28
PDLIM3-203ENST00000284771 CLN5O75503 358 aa16.82■□□□□ 0.28
PDLIM3-203ENST00000284771 GPR183P32249 361 aa16.82■□□□□ 0.28
PDLIM3-203ENST00000284771 ADMP35318 185 aa16.82■□□□□ 0.28
PDLIM3-203ENST00000284771 KHDC1LQ5JSQ8 128 aa16.82■□□□□ 0.28
PDLIM3-203ENST00000284771 TMUB2Q71RG4 321 aa16.82■□□□□ 0.28
PDLIM3-203ENST00000284771 TMEM144Q7Z5S9 345 aa16.82■□□□□ 0.28
PDLIM3-203ENST00000284771 ZNF414Q96IQ9 312 aa16.82■□□□□ 0.28
PDLIM3-203ENST00000284771 ATP5SQ99766 215 aa16.82■□□□□ 0.28
PDLIM3-203ENST00000284771 CHRDL1Q9BU40 450 aa16.82■□□□□ 0.28
PDLIM3-203ENST00000284771 TMEM147Q9BVK8 224 aa16.82■□□□□ 0.28
PDLIM3-203ENST00000284771 ARL6Q9H0F7 186 aa16.82■□□□□ 0.28
PDLIM3-203ENST00000284771 LSM4Q9Y4Z0 139 aaKnown RBP16.82■□□□□ 0.28
PDLIM3-203ENST00000284771 ANKRD34BA5PLL1 514 aa16.81■□□□□ 0.28
PDLIM3-203ENST00000284771 PPP5D1E7EU14 171 aa16.81■□□□□ 0.28
PDLIM3-203ENST00000284771 IGLC1P0CG04 106 aa16.81■□□□□ 0.28
PDLIM3-203ENST00000284771 Q56UQ5 140 aa16.81■□□□□ 0.28
PDLIM3-203ENST00000284771 TXN2Q99757 166 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms