RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 FAM201AQ5SY85 155 aa10.49□□□□□ -0.73
C9orf3-201ENST00000277198 C1orf194Q5T5A4 169 aa10.49□□□□□ -0.73
C9orf3-201ENST00000277198 FAM71F2Q6NXP2 309 aa10.49□□□□□ -0.73
C9orf3-201ENST00000277198 WDR73Q6P4I2 378 aa10.49□□□□□ -0.73
C9orf3-201ENST00000277198 MMD2Q8IY49 270 aa10.49□□□□□ -0.73
C9orf3-201ENST00000277198 OR4A5Q8NH83 315 aa10.49□□□□□ -0.73
C9orf3-201ENST00000277198 CMTM2Q8TAZ6 248 aa10.49□□□□□ -0.73
C9orf3-201ENST00000277198 NRGNQ92686 78 aa10.49□□□□□ -0.73
C9orf3-201ENST00000277198 HINT2Q9BX68 163 aa10.49□□□□□ -0.73
C9orf3-201ENST00000277198 V9GYV3 84 aa10.49□□□□□ -0.73
C9orf3-201ENST00000277198 NKX6-3A6NJ46 265 aa10.48□□□□□ -0.73
C9orf3-201ENST00000277198 ISLRO14498 428 aa10.48□□□□□ -0.73
C9orf3-201ENST00000277198 APOA2P02652 100 aa10.48□□□□□ -0.73
C9orf3-201ENST00000277198 CD40P25942 277 aa10.48□□□□□ -0.73
C9orf3-201ENST00000277198 ERVFC1-1P60608 527 aa10.48□□□□□ -0.73
C9orf3-201ENST00000277198 CD69Q07108 199 aa10.48□□□□□ -0.73
C9orf3-201ENST00000277198 SSX8Q7RTT4 187 aa10.48□□□□□ -0.73
C9orf3-201ENST00000277198 TMEM256Q8N2U0 113 aa10.48□□□□□ -0.73
C9orf3-201ENST00000277198 LINC01560Q8TB33 94 aa10.48□□□□□ -0.73
C9orf3-201ENST00000277198 RNASE6Q93091 150 aaKnown RBP10.48□□□□□ -0.73
C9orf3-201ENST00000277198 CCL13Q99616 98 aa10.48□□□□□ -0.73
C9orf3-201ENST00000277198 MRPL18Q9H0U6 180 aaKnown RBP10.48□□□□□ -0.73
C9orf3-201ENST00000277198 NAGKQ9UJ70 344 aa10.48□□□□□ -0.73
C9orf3-201ENST00000277198 SRRM4A7MD48 611 aaKnown RBP10.48□□□□□ -0.73
C9orf3-201ENST00000277198 SCGB1D1O95968 90 aa10.48□□□□□ -0.73
C9orf3-201ENST00000277198 IGKV1-16P04430 117 aa10.48□□□□□ -0.73
C9orf3-201ENST00000277198 C8orf88P0DMB2 117 aa10.48□□□□□ -0.73
C9orf3-201ENST00000277198 RNASE2P10153 161 aaKnown RBP10.48□□□□□ -0.73
C9orf3-201ENST00000277198 CRISP2P16562 243 aa10.48□□□□□ -0.73
C9orf3-201ENST00000277198 GNG10P50151 68 aa10.48□□□□□ -0.73
C9orf3-201ENST00000277198 ERHP84090 104 aaKnown RBP10.48□□□□□ -0.73
C9orf3-201ENST00000277198 HLA-DRB5Q30154 266 aa10.48□□□□□ -0.73
C9orf3-201ENST00000277198 FBXL19-AS1Q494R0 122 aa10.48□□□□□ -0.73
C9orf3-201ENST00000277198 TIGITQ495A1 244 aa10.48□□□□□ -0.73
C9orf3-201ENST00000277198 C8orf31Q8N9H6 132 aa10.48□□□□□ -0.73
C9orf3-201ENST00000277198 OR5AN1Q8NGI8 311 aa10.48□□□□□ -0.73
C9orf3-201ENST00000277198 VSTM2AQ8TAG5 236 aa10.48□□□□□ -0.73
C9orf3-201ENST00000277198 NDUFA4L2Q9NRX3 87 aa10.48□□□□□ -0.73
C9orf3-201ENST00000277198 ABCA4P78363 2273 aa10.47□□□□□ -0.73
C9orf3-201ENST00000277198 IGKV1OR2-108A0A075B7D4 117 aa10.47□□□□□ -0.73
C9orf3-201ENST00000277198 KIR2DL5BA0A0G2JN68 375 aa10.47□□□□□ -0.73
C9orf3-201ENST00000277198 KIR2DL5BA0A0G2JPC4 375 aa10.47□□□□□ -0.73
C9orf3-201ENST00000277198 A0A1W2PN81 502 aa10.47□□□□□ -0.73
C9orf3-201ENST00000277198 SAA1P0DJI8 122 aaPredicted RBP10.47□□□□□ -0.73
C9orf3-201ENST00000277198 CX3CL1P78423 397 aa10.47□□□□□ -0.73
C9orf3-201ENST00000277198 TMEM177Q53S58 311 aa10.47□□□□□ -0.73
C9orf3-201ENST00000277198 CENPWQ5EE01 88 aa10.47□□□□□ -0.73
C9orf3-201ENST00000277198 ALKBH2Q6NS38 261 aa10.47□□□□□ -0.73
C9orf3-201ENST00000277198 DUX4L9Q6RFH8 374 aaPredicted RBP10.47□□□□□ -0.73
C9orf3-201ENST00000277198 KIR2DL5AQ8N109 375 aa10.47□□□□□ -0.73
C9orf3-201ENST00000277198 FAM216BQ8N7L0 139 aa10.47□□□□□ -0.73
C9orf3-201ENST00000277198 ZNF714Q96N38 554 aa10.47□□□□□ -0.73
C9orf3-201ENST00000277198 SLC25A33Q9BSK2 321 aa10.47□□□□□ -0.73
C9orf3-201ENST00000277198 COMMD5Q9GZQ3 224 aa10.47□□□□□ -0.73
C9orf3-201ENST00000277198 TMEM106BQ9NUM4 274 aa10.47□□□□□ -0.73
C9orf3-201ENST00000277198 FCN1O00602 326 aa10.46□□□□□ -0.73
C9orf3-201ENST00000277198 ACTL6BO94805 426 aa10.46□□□□□ -0.73
C9orf3-201ENST00000277198 USF1P22415 310 aaPredicted RBP10.46□□□□□ -0.73
C9orf3-201ENST00000277198 CBLN1P23435 193 aa10.46□□□□□ -0.73
C9orf3-201ENST00000277198 CRYBB3P26998 211 aa10.46□□□□□ -0.73
C9orf3-201ENST00000277198 FAM27E3Q08E93 113 aa10.46□□□□□ -0.73
C9orf3-201ENST00000277198 TMEM108Q6UXF1 575 aa10.46□□□□□ -0.73
C9orf3-201ENST00000277198 MRPL52Q86TS9 123 aaKnown RBP10.46□□□□□ -0.73
C9orf3-201ENST00000277198 DEFB108BQ8NET1 73 aa10.46□□□□□ -0.73
C9orf3-201ENST00000277198 OR1L6Q8NGR2 347 aa10.46□□□□□ -0.73
C9orf3-201ENST00000277198 ZNF503Q96F45 646 aa10.46□□□□□ -0.73
C9orf3-201ENST00000277198 A0A1B0GV90 55 aa10.46□□□□□ -0.74
C9orf3-201ENST00000277198 SLC17A3O00476 420 aa10.46□□□□□ -0.74
C9orf3-201ENST00000277198 OR7C2O60412 319 aa10.46□□□□□ -0.74
C9orf3-201ENST00000277198 MMP23AO75900 390 aa10.46□□□□□ -0.74
C9orf3-201ENST00000277198 HNF1AP20823 631 aa10.46□□□□□ -0.74
C9orf3-201ENST00000277198 PPOXP50336 477 aa10.46□□□□□ -0.74
C9orf3-201ENST00000277198 RPL8P62917 257 aaKnown RBP10.46□□□□□ -0.74
C9orf3-201ENST00000277198 C22orf34Q6ZV56 151 aa10.46□□□□□ -0.74
C9orf3-201ENST00000277198 ZNF596Q8TC21 504 aa10.46□□□□□ -0.74
C9orf3-201ENST00000277198 PRR14LQ5THK1 2151 aa10.45□□□□□ -0.74
C9orf3-201ENST00000277198 H0YJW9 148 aa10.45□□□□□ -0.74
C9orf3-201ENST00000277198 NUPR1O60356 82 aa10.45□□□□□ -0.74
C9orf3-201ENST00000277198 MYOD1P15172 320 aa10.45□□□□□ -0.74
C9orf3-201ENST00000277198 PDPNQ86YL7 162 aa10.45□□□□□ -0.74
C9orf3-201ENST00000277198 LINC00311Q8N616 119 aa10.45□□□□□ -0.74
C9orf3-201ENST00000277198 OR4C13Q8NGP0 309 aa10.45□□□□□ -0.74
C9orf3-201ENST00000277198 TMEM167AQ8TBQ9 72 aa10.45□□□□□ -0.74
C9orf3-201ENST00000277198 MISP3Q96FF7 219 aa10.45□□□□□ -0.74
C9orf3-201ENST00000277198 TP53TG3Q9ULZ0 132 aa10.45□□□□□ -0.74
C9orf3-201ENST00000277198 MAP1AP78559 2803 aaPredicted RBP10.45□□□□□ -0.74
C9orf3-201ENST00000277198 ANKRD17O75179 2603 aaKnown RBP10.45□□□□□ -0.74
C9orf3-201ENST00000277198 TET2Q6N021 2002 aaPredicted RBP10.45□□□□□ -0.74
C9orf3-201ENST00000277198 PSMB11A5LHX3 300 aa10.45□□□□□ -0.74
C9orf3-201ENST00000277198 SNURFLB1AK76 121 aa10.45□□□□□ -0.74
C9orf3-201ENST00000277198 GGTLC3B5MD39 225 aa10.45□□□□□ -0.74
C9orf3-201ENST00000277198 SUB1P53999 127 aaKnown RBP eCLIP10.45□□□□□ -0.74
C9orf3-201ENST00000277198 OR10J3Q5JRS4 329 aa10.45□□□□□ -0.74
C9orf3-201ENST00000277198 OR1L4Q8NGR5 311 aa10.45□□□□□ -0.74
C9orf3-201ENST00000277198 TMEM186Q96B77 213 aa10.45□□□□□ -0.74
C9orf3-201ENST00000277198 FLYWCH2Q96CP2 140 aaKnown RBP10.45□□□□□ -0.74
C9orf3-201ENST00000277198 HARBI1Q96MB7 349 aa10.45□□□□□ -0.74
C9orf3-201ENST00000277198 DNAJC4Q9NNZ3 241 aa10.45□□□□□ -0.74
C9orf3-201ENST00000277198 CDC42EP3Q9UKI2 254 aa10.45□□□□□ -0.74
C9orf3-201ENST00000277198 POLR3KQ9Y2Y1 108 aaPredicted RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms