RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 NEUROG3Q9Y4Z2 214 aa9.55□□□□□ -0.88
USP53-201ENST00000274030 APOMO95445 188 aa9.55□□□□□ -0.88
USP53-201ENST00000274030 RPL23P62829 140 aaKnown RBP9.55□□□□□ -0.88
USP53-201ENST00000274030 SFTA2Q6UW10 78 aa9.55□□□□□ -0.88
USP53-201ENST00000274030 SPACA3Q8IXA5 215 aa9.55□□□□□ -0.88
USP53-201ENST00000274030 FAM131CQ96AQ9 280 aa9.55□□□□□ -0.88
USP53-201ENST00000274030 WNK2Q9Y3S1 2297 aa9.55□□□□□ -0.88
USP53-201ENST00000274030 BRCA1P38398 1863 aaKnown RBP9.55□□□□□ -0.88
USP53-201ENST00000274030 BRWD3Q6RI45 1802 aa9.54□□□□□ -0.88
USP53-201ENST00000274030 IGKV1-12A0A0C4DH73 117 aa9.54□□□□□ -0.88
USP53-201ENST00000274030 IGKV1D-12P01611 117 aa9.54□□□□□ -0.88
USP53-201ENST00000274030 RHOGP84095 191 aa9.54□□□□□ -0.88
USP53-201ENST00000274030 C10orf55Q5SWW7 151 aa9.54□□□□□ -0.88
USP53-201ENST00000274030 LRRC37AA6NMS7 1700 aa9.54□□□□□ -0.88
USP53-201ENST00000274030 H7C1H1 209 aa9.54□□□□□ -0.88
USP53-201ENST00000274030 SMIM13P0DJ93 91 aa9.54□□□□□ -0.88
USP53-201ENST00000274030 C5orf24Q7Z6I8 188 aa9.54□□□□□ -0.88
USP53-201ENST00000274030 C15orf61A6NNL5 157 aa9.54□□□□□ -0.88
USP53-201ENST00000274030 LY6G6FQ5SQ64 297 aa9.54□□□□□ -0.88
USP53-201ENST00000274030 FAM90A1Q86YD7 464 aa9.54□□□□□ -0.88
USP53-201ENST00000274030 GFI1Q99684 422 aa9.54□□□□□ -0.88
USP53-201ENST00000274030 CARHSP1Q9Y2V2 147 aaKnown RBP9.54□□□□□ -0.88
USP53-201ENST00000274030 TRAV40A0A0B4J280 105 aa9.54□□□□□ -0.88
USP53-201ENST00000274030 TMEM50AO95807 157 aa9.54□□□□□ -0.88
USP53-201ENST00000274030 IGHV1-46P01743 117 aa9.54□□□□□ -0.88
USP53-201ENST00000274030 CACNG7P62955 275 aa9.54□□□□□ -0.88
USP53-201ENST00000274030 RNF125Q96EQ8 232 aa9.54□□□□□ -0.88
USP53-201ENST00000274030 DMRT1Q9Y5R6 373 aa9.54□□□□□ -0.88
USP53-201ENST00000274030 NAPSAO96009 420 aa9.53□□□□□ -0.88
USP53-201ENST00000274030 CD59P13987 128 aa9.53□□□□□ -0.88
USP53-201ENST00000274030 THBDP07204 575 aa9.53□□□□□ -0.88
USP53-201ENST00000274030 CCL20P78556 96 aa9.53□□□□□ -0.88
USP53-201ENST00000274030 CIARTQ8N365 385 aaPredicted RBP9.53□□□□□ -0.88
USP53-201ENST00000274030 DEFB104AQ8WTQ1 72 aa9.53□□□□□ -0.88
USP53-201ENST00000274030 DOCK4Q8N1I0 1966 aa9.53□□□□□ -0.88
USP53-201ENST00000274030 CA1P00915 261 aaPredicted RBP9.53□□□□□ -0.88
USP53-201ENST00000274030 TYMSP04818 313 aa9.53□□□□□ -0.88
USP53-201ENST00000274030 GREB1Q4ZG55 1949 aa9.53□□□□□ -0.88
USP53-201ENST00000274030 ORMDL3Q8N138 153 aa9.53□□□□□ -0.88
USP53-201ENST00000274030 CRIPAKQ8N1N5 446 aa9.53□□□□□ -0.88
USP53-201ENST00000274030 VSIRQ9H7M9 311 aa9.53□□□□□ -0.88
USP53-201ENST00000274030 KIAA2026Q5HYC2 2103 aa9.53□□□□□ -0.88
USP53-201ENST00000274030 PI4KAP42356 2102 aa9.52□□□□□ -0.88
USP53-201ENST00000274030 A8MXK9 166 aa9.52□□□□□ -0.88
USP53-201ENST00000274030 C3orf36Q3SXR2 165 aa9.52□□□□□ -0.88
USP53-201ENST00000274030 LDLRAD2Q5SZI1 272 aa9.52□□□□□ -0.88
USP53-201ENST00000274030 TRAV5A0A0B4J249 113 aa9.52□□□□□ -0.89
USP53-201ENST00000274030 SERF1AO75920 110 aa9.52□□□□□ -0.89
USP53-201ENST00000274030 DUTP33316 252 aaKnown RBP9.52□□□□□ -0.89
USP53-201ENST00000274030 ZNF600Q6ZNG1 722 aa9.52□□□□□ -0.89
USP53-201ENST00000274030 TMEM219Q86XT9 240 aa9.52□□□□□ -0.89
USP53-201ENST00000274030 TTC9CQ8N5M4 171 aa9.52□□□□□ -0.89
USP53-201ENST00000274030 USF3Q68DE3 2245 aa9.52□□□□□ -0.89
USP53-201ENST00000274030 LEPP41159 167 aa9.52□□□□□ -0.89
USP53-201ENST00000274030 TP53BP1Q12888 1972 aaPredicted RBP9.52□□□□□ -0.89
USP53-201ENST00000274030 VDAC2P45880 294 aaPredicted RBP9.52□□□□□ -0.89
USP53-201ENST00000274030 ZNF324BQ6AW86 544 aaPredicted RBP9.52□□□□□ -0.89
USP53-201ENST00000274030 WFDC1Q9HC57 220 aa9.52□□□□□ -0.89
USP53-201ENST00000274030 C5orf63A6NC05 138 aa9.51□□□□□ -0.89
USP53-201ENST00000274030 IZUMO1RA6ND01 250 aa9.51□□□□□ -0.89
USP53-201ENST00000274030 FABP5P3A8MUU1 101 aa9.51□□□□□ -0.89
USP53-201ENST00000274030 MLNRO43193 412 aa9.51□□□□□ -0.89
USP53-201ENST00000274030 HOXA5P20719 270 aa9.51□□□□□ -0.89
USP53-201ENST00000274030 OR5AN1Q8NGI8 311 aa9.51□□□□□ -0.89
USP53-201ENST00000274030 NPFFR1Q9GZQ6 430 aa9.51□□□□□ -0.89
USP53-201ENST00000274030 SBF2Q86WG5 1849 aa9.51□□□□□ -0.89
USP53-201ENST00000274030 ATP5LO75964 103 aa9.51□□□□□ -0.89
USP53-201ENST00000274030 TDGF1P13385 188 aa9.51□□□□□ -0.89
USP53-201ENST00000274030 SRSF6Q13247 344 aaKnown RBP9.51□□□□□ -0.89
USP53-201ENST00000274030 TTC32Q5I0X7 151 aa9.51□□□□□ -0.89
USP53-201ENST00000274030 COPS9Q8WXC6 57 aa9.51□□□□□ -0.89
USP53-201ENST00000274030 C2orf88Q9BSF0 95 aa9.51□□□□□ -0.89
USP53-201ENST00000274030 TAF1LQ8IZX4 1826 aa9.51□□□□□ -0.89
USP53-201ENST00000274030 CCL1P22362 96 aa9.51□□□□□ -0.89
USP53-201ENST00000274030 EVI2AP22794 236 aa9.51□□□□□ -0.89
USP53-201ENST00000274030 GGNQ86UU5 652 aa9.51□□□□□ -0.89
USP53-201ENST00000274030 STHQ8IWL8 128 aa9.51□□□□□ -0.89
USP53-201ENST00000274030 JMJD8Q96S16 334 aa9.51□□□□□ -0.89
USP53-201ENST00000274030 IGLV3-32A0A0A0MS00 114 aa9.51□□□□□ -0.89
USP53-201ENST00000274030 F8VVB4 439 aa9.51□□□□□ -0.89
USP53-201ENST00000274030 F8VWA3 439 aa9.51□□□□□ -0.89
USP53-201ENST00000274030 NTN3O00634 580 aaPredicted RBP9.51□□□□□ -0.89
USP53-201ENST00000274030 LINC00271P0C7V0 271 aa9.51□□□□□ -0.89
USP53-201ENST00000274030 KLRD1Q13241 179 aa9.51□□□□□ -0.89
USP53-201ENST00000274030 GTF3AQ92664 365 aaKnown RBP9.51□□□□□ -0.89
USP53-201ENST00000274030 OTORQ9NRC9 128 aa9.51□□□□□ -0.89
USP53-201ENST00000274030 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.5□□□□□ -0.89
USP53-201ENST00000274030 J3QRE1 110 aa9.5□□□□□ -0.89
USP53-201ENST00000274030 ADMP35318 185 aa9.5□□□□□ -0.89
USP53-201ENST00000274030 C1QL4Q86Z23 238 aa9.5□□□□□ -0.89
USP53-201ENST00000274030 FAM89BQ8N5H3 189 aa9.5□□□□□ -0.89
USP53-201ENST00000274030 EPDR1Q9UM22 224 aa9.5□□□□□ -0.89
USP53-201ENST00000274030 ARID2Q68CP9 1835 aa9.5□□□□□ -0.89
USP53-201ENST00000274030 ZNF236Q9UL36 1845 aa9.5□□□□□ -0.89
USP53-201ENST00000274030 PATJQ8NI35 1801 aa9.5□□□□□ -0.89
USP53-201ENST00000274030 ZNF585BQ52M93 769 aa9.5□□□□□ -0.89
USP53-201ENST00000274030 OR10J3Q5JRS4 329 aa9.5□□□□□ -0.89
USP53-201ENST00000274030 MRPS16Q9Y3D3 137 aaKnown RBP9.5□□□□□ -0.89
USP53-201ENST00000274030 IGKV1-27A0A075B6S5 117 aa9.5□□□□□ -0.89
USP53-201ENST00000274030 EFNB3Q15768 340 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms