RNA–Protein interactions for RNA: ENST00000271971.6

CAPN9-201, Transcript of calpain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN9, Length 2,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-201ENST00000271971 BET1LQ9NYM9 111 aa10.06□□□□□ -0.8
CAPN9-201ENST00000271971 GNG13Q9P2W3 67 aa10.06□□□□□ -0.8
CAPN9-201ENST00000271971 FOXA2Q9Y261 457 aaPredicted RBP10.06□□□□□ -0.8
CAPN9-201ENST00000271971 OR51B2Q9Y5P1 312 aa10.06□□□□□ -0.8
CAPN9-201ENST00000271971 IGHV3OR16-10A0A075B7F0 116 aa10.05□□□□□ -0.8
CAPN9-201ENST00000271971 IFNA5P01569 189 aa10.05□□□□□ -0.8
CAPN9-201ENST00000271971 OR8G2PQ6IF36 304 aa10.05□□□□□ -0.8
CAPN9-201ENST00000271971 TMEM170AQ8WVE7 144 aa10.05□□□□□ -0.8
CAPN9-201ENST00000271971 NAT8Q9UHE5 227 aa10.05□□□□□ -0.8
CAPN9-201ENST00000271971 ITPR3Q14573 2671 aa10.05□□□□□ -0.8
CAPN9-201ENST00000271971 PPP5D1E7EU14 171 aa10.04□□□□□ -0.8
CAPN9-201ENST00000271971 IFNA1P01562 189 aa10.04□□□□□ -0.8
CAPN9-201ENST00000271971 CEACAM3P40198 252 aa10.04□□□□□ -0.8
CAPN9-201ENST00000271971 C10orf55Q5SWW7 151 aa10.04□□□□□ -0.8
CAPN9-201ENST00000271971 CFHR4Q92496 578 aa10.04□□□□□ -0.8
CAPN9-201ENST00000271971 PARD6GQ9BYG4 376 aaPredicted RBP10.04□□□□□ -0.8
CAPN9-201ENST00000271971 PDZD2O15018 2839 aa10.04□□□□□ -0.8
CAPN9-201ENST00000271971 A0A096LNT2 108 aa10.04□□□□□ -0.8
CAPN9-201ENST00000271971 SOX15O60248 233 aa10.04□□□□□ -0.8
CAPN9-201ENST00000271971 MSMBP08118 114 aa10.04□□□□□ -0.8
CAPN9-201ENST00000271971 SLC25A16P16260 332 aa10.04□□□□□ -0.8
CAPN9-201ENST00000271971 LGALS4P56470 323 aa10.04□□□□□ -0.8
CAPN9-201ENST00000271971 FAM3BP58499 235 aaPredicted RBP10.04□□□□□ -0.8
CAPN9-201ENST00000271971 RUNX1Q01196 453 aa10.04□□□□□ -0.8
CAPN9-201ENST00000271971 PAX8Q06710 450 aa10.04□□□□□ -0.8
CAPN9-201ENST00000271971 ANKRD39Q53RE8 183 aa10.04□□□□□ -0.8
CAPN9-201ENST00000271971 Q5PR19 223 aa10.04□□□□□ -0.8
CAPN9-201ENST00000271971 CSPG4Q6UVK1 2322 aa10.04□□□□□ -0.8
CAPN9-201ENST00000271971 TMEM14EPQ6UXP3 125 aa10.04□□□□□ -0.8
CAPN9-201ENST00000271971 CYP2G1PQ6ZSU1 146 aa10.04□□□□□ -0.8
CAPN9-201ENST00000271971 OR52E5Q8NH55 327 aa10.04□□□□□ -0.8
CAPN9-201ENST00000271971 TMEM18Q96B42 140 aa10.04□□□□□ -0.8
CAPN9-201ENST00000271971 HEYLQ9NQ87 328 aaPredicted RBP10.04□□□□□ -0.8
CAPN9-201ENST00000271971 PRNDQ9UKY0 176 aa10.04□□□□□ -0.8
CAPN9-201ENST00000271971 XKRY2A2RUG3 117 aa10.03□□□□□ -0.8
CAPN9-201ENST00000271971 VENTXO95231 258 aa10.03□□□□□ -0.8
CAPN9-201ENST00000271971 MBP02144 154 aa10.03□□□□□ -0.8
CAPN9-201ENST00000271971 ZNF25P17030 456 aaPredicted RBP10.03□□□□□ -0.8
CAPN9-201ENST00000271971 SAA4P35542 130 aa10.03□□□□□ -0.8
CAPN9-201ENST00000271971 VDAC2P45880 294 aaPredicted RBP10.03□□□□□ -0.8
CAPN9-201ENST00000271971 UBE2E1P51965 193 aa10.03□□□□□ -0.8
CAPN9-201ENST00000271971 HSPE1P61604 102 aaKnown RBP10.03□□□□□ -0.8
CAPN9-201ENST00000271971 SERF2P84101 59 aa10.03□□□□□ -0.8
CAPN9-201ENST00000271971 IQCJQ1A5X6 159 aa10.03□□□□□ -0.8
CAPN9-201ENST00000271971 RUSC1-AS1Q66K80 236 aa10.03□□□□□ -0.8
CAPN9-201ENST00000271971 ZNF430Q9H8G1 570 aaPredicted RBP10.03□□□□□ -0.8
CAPN9-201ENST00000271971 BEX4Q9NWD9 120 aaPredicted RBP10.03□□□□□ -0.8
CAPN9-201ENST00000271971 PRRC2AP48634 2157 aaKnown RBP10.03□□□□□ -0.8
CAPN9-201ENST00000271971 ZNF705GA8MUZ8 300 aaPredicted RBP10.03□□□□□ -0.8
CAPN9-201ENST00000271971 RNF223E7ERA6 249 aa10.03□□□□□ -0.8
CAPN9-201ENST00000271971 E7EUB6 86 aa10.03□□□□□ -0.8
CAPN9-201ENST00000271971 M0R143 59 aa10.03□□□□□ -0.8
CAPN9-201ENST00000271971 IGKV1D-33P01593 117 aa10.03□□□□□ -0.8
CAPN9-201ENST00000271971 IGKV1-33P01594 117 aa10.03□□□□□ -0.8
CAPN9-201ENST00000271971 TYMSP04818 313 aa10.03□□□□□ -0.8
CAPN9-201ENST00000271971 RPL8P62917 257 aaKnown RBP10.03□□□□□ -0.8
CAPN9-201ENST00000271971 ACOT6Q3I5F7 207 aaPredicted RBP10.03□□□□□ -0.8
CAPN9-201ENST00000271971 VMA21Q3ZAQ7 101 aa10.03□□□□□ -0.8
CAPN9-201ENST00000271971 PDLIM3Q53GG5 364 aaPredicted RBP10.03□□□□□ -0.8
CAPN9-201ENST00000271971 PIP4P2Q8N4L2 257 aa10.03□□□□□ -0.8
CAPN9-201ENST00000271971 TMEM167AQ8TBQ9 72 aa10.03□□□□□ -0.8
CAPN9-201ENST00000271971 CIB3Q96Q77 187 aaPredicted RBP10.03□□□□□ -0.8
CAPN9-201ENST00000271971 CBY1Q9Y3M2 126 aa10.03□□□□□ -0.8
CAPN9-201ENST00000271971 TRAV40A0A0B4J280 105 aa10.02□□□□□ -0.8
CAPN9-201ENST00000271971 CENPVL3A0A0U1RRI6 287 aa10.02□□□□□ -0.8
CAPN9-201ENST00000271971 TEX50A0A1B0GTY4 177 aa10.02□□□□□ -0.8
CAPN9-201ENST00000271971 C15orf62A8K5M9 175 aa10.02□□□□□ -0.8
CAPN9-201ENST00000271971 M0QZK8 103 aa10.02□□□□□ -0.8
CAPN9-201ENST00000271971 GGCTO75223 188 aaKnown RBP10.02□□□□□ -0.8
CAPN9-201ENST00000271971 ERVFC1-1P60608 527 aa10.02□□□□□ -0.8
CAPN9-201ENST00000271971 MRGPRG-AS1Q2M3A8 158 aa10.02□□□□□ -0.8
CAPN9-201ENST00000271971 THNSL2Q86YJ6 484 aa10.02□□□□□ -0.8
CAPN9-201ENST00000271971 OR10W1Q8NGF6 305 aa10.02□□□□□ -0.8
CAPN9-201ENST00000271971 OR51G1Q8NGK1 321 aa10.02□□□□□ -0.8
CAPN9-201ENST00000271971 AJUBAQ96IF1 538 aa10.02□□□□□ -0.8
CAPN9-201ENST00000271971 RPRMQ9NS64 109 aa10.02□□□□□ -0.8
CAPN9-201ENST00000271971 PSG5Q15238 335 aa10.02□□□□□ -0.81
CAPN9-201ENST00000271971 TMEM241Q24JQ0 296 aa10.02□□□□□ -0.81
CAPN9-201ENST00000271971 ACTL10Q5JWF8 245 aa10.02□□□□□ -0.81
CAPN9-201ENST00000271971 VSTM2AQ8TAG5 236 aa10.02□□□□□ -0.81
CAPN9-201ENST00000271971 SCGB1C1Q8TD33 95 aa10.02□□□□□ -0.81
CAPN9-201ENST00000271971 PINX1Q96BK5 328 aaKnown RBP10.02□□□□□ -0.81
CAPN9-201ENST00000271971 FBXL15Q9H469 300 aa10.02□□□□□ -0.81
CAPN9-201ENST00000271971 HIF1ANQ9NWT6 349 aa10.02□□□□□ -0.81
CAPN9-201ENST00000271971 TEX15Q9BXT5 2789 aa10.02□□□□□ -0.81
CAPN9-201ENST00000271971 PMS2P5A8MQ11 134 aa10.01□□□□□ -0.81
CAPN9-201ENST00000271971 RRHO14718 337 aa10.01□□□□□ -0.81
CAPN9-201ENST00000271971 LGALS7P47929 136 aa10.01□□□□□ -0.81
CAPN9-201ENST00000271971 PRCDQ00LT1 54 aa10.01□□□□□ -0.81
CAPN9-201ENST00000271971 SLC38A11Q08AI6 406 aa10.01□□□□□ -0.81
CAPN9-201ENST00000271971 GAGE1Q13065 139 aa10.01□□□□□ -0.81
CAPN9-201ENST00000271971 HES1Q14469 280 aa10.01□□□□□ -0.81
CAPN9-201ENST00000271971 C1orf194Q5T5A4 169 aa10.01□□□□□ -0.81
CAPN9-201ENST00000271971 MINOS1Q5TGZ0 78 aa10.01□□□□□ -0.81
CAPN9-201ENST00000271971 TEX38Q6PEX7 206 aa10.01□□□□□ -0.81
CAPN9-201ENST00000271971 BRD3OSQ6XYD6 125 aa10.01□□□□□ -0.81
CAPN9-201ENST00000271971 C16orf82Q7Z2V1 217 aa10.01□□□□□ -0.81
CAPN9-201ENST00000271971 ANAPC16Q96DE5 110 aa10.01□□□□□ -0.81
CAPN9-201ENST00000271971 OR5B12Q96R08 314 aa10.01□□□□□ -0.81
CAPN9-201ENST00000271971 TMEM208Q9BTX3 173 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms