RNA–Protein interactions for RNA: ENST00000269571.9

ERBB2-201, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERBB2, Length 4,545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-201ENST00000269571 LIME1Q9H400 295 aa10.12□□□□□ -0.79
ERBB2-201ENST00000269571 CALYQ9NYX4 217 aa10.12□□□□□ -0.79
ERBB2-201ENST00000269571 TRAV24A0A0B4J272 114 aa10.12□□□□□ -0.79
ERBB2-201ENST00000269571 LINC00205P59089 165 aa10.12□□□□□ -0.79
ERBB2-201ENST00000269571 EAF1Q96JC9 268 aaPredicted RBP10.12□□□□□ -0.79
ERBB2-201ENST00000269571 AP5S1Q9NUS5 200 aa10.12□□□□□ -0.79
ERBB2-201ENST00000269571 CRIM1Q9NZV1 1036 aa10.12□□□□□ -0.79
ERBB2-201ENST00000269571 CKS2P33552 79 aa10.12□□□□□ -0.79
ERBB2-201ENST00000269571 TIMP3P35625 211 aa10.12□□□□□ -0.79
ERBB2-201ENST00000269571 SAMD5Q5TGI4 173 aa10.12□□□□□ -0.79
ERBB2-201ENST00000269571 GP6Q9HCN6 339 aa10.12□□□□□ -0.79
ERBB2-201ENST00000269571 KBTBD11-OT1A0A1B0GTJ5 212 aa10.11□□□□□ -0.79
ERBB2-201ENST00000269571 GOLT1AQ6ZVE7 132 aa10.11□□□□□ -0.79
ERBB2-201ENST00000269571 NOTCH2Q04721 2471 aa10.11□□□□□ -0.79
ERBB2-201ENST00000269571 EMP1P54849 157 aa10.11□□□□□ -0.79
ERBB2-201ENST00000269571 GFRA1P56159 465 aa10.11□□□□□ -0.79
ERBB2-201ENST00000269571 FAM71F2Q6NXP2 309 aa10.11□□□□□ -0.79
ERBB2-201ENST00000269571 NFAM1Q8NET5 270 aaPredicted RBP10.11□□□□□ -0.79
ERBB2-201ENST00000269571 SNRNP40Q96DI7 357 aaKnown RBP10.11□□□□□ -0.79
ERBB2-201ENST00000269571 IGKV1-5P01602 117 aa10.11□□□□□ -0.79
ERBB2-201ENST00000269571 PPBPP02775 128 aa10.11□□□□□ -0.79
ERBB2-201ENST00000269571 TWIST1Q15672 202 aa10.11□□□□□ -0.79
ERBB2-201ENST00000269571 TCF24Q7RTU0 167 aa10.11□□□□□ -0.79
ERBB2-201ENST00000269571 PRR7Q8TB68 274 aa10.11□□□□□ -0.79
ERBB2-201ENST00000269571 CENPFP49454 3210 aa10.11□□□□□ -0.79
ERBB2-201ENST00000269571 CLDN18P56856 261 aa10.1□□□□□ -0.79
ERBB2-201ENST00000269571 CFHR1Q03591 330 aa10.1□□□□□ -0.79
ERBB2-201ENST00000269571 TMEM238LA0A1B0GVL6 79 aa10.1□□□□□ -0.79
ERBB2-201ENST00000269571 A6NJY4 79 aa10.1□□□□□ -0.79
ERBB2-201ENST00000269571 HIGD1CA8MV81 97 aa10.1□□□□□ -0.79
ERBB2-201ENST00000269571 PRR33A8MZF0 331 aa10.1□□□□□ -0.79
ERBB2-201ENST00000269571 ZNF418Q8TF45 676 aaPredicted RBP10.1□□□□□ -0.79
ERBB2-201ENST00000269571 AGMATQ9BSE5 352 aa10.1□□□□□ -0.79
ERBB2-201ENST00000269571 TSSC4Q9Y5U2 329 aaPredicted RBP10.1□□□□□ -0.79
ERBB2-201ENST00000269571 ARHGAP21Q5T5U3 1957 aa10.1□□□□□ -0.79
ERBB2-201ENST00000269571 IGHV3-35A0A0C4DH35 117 aa10.1□□□□□ -0.79
ERBB2-201ENST00000269571 hDV102S1A0JD36 115 aa10.1□□□□□ -0.79
ERBB2-201ENST00000269571 FAM231BA6NCW3 169 aa10.1□□□□□ -0.79
ERBB2-201ENST00000269571 HOXA4Q00056 320 aaPredicted RBP10.1□□□□□ -0.79
ERBB2-201ENST00000269571 TMEM249Q2WGJ8 235 aa10.1□□□□□ -0.79
ERBB2-201ENST00000269571 HIGD1AQ9Y241 93 aa10.1□□□□□ -0.79
ERBB2-201ENST00000269571 LGALS7P47929 136 aa10.1□□□□□ -0.79
ERBB2-201ENST00000269571 HBBP68871 147 aa10.1□□□□□ -0.79
ERBB2-201ENST00000269571 SPATA31B1PQ5VZV4 182 aa10.1□□□□□ -0.79
ERBB2-201ENST00000269571 DNM1P46Q6ZS02 220 aa10.1□□□□□ -0.79
ERBB2-201ENST00000269571 TMEM144Q7Z5S9 345 aa10.1□□□□□ -0.79
ERBB2-201ENST00000269571 LHFPL4Q7Z7J7 247 aa10.1□□□□□ -0.79
ERBB2-201ENST00000269571 PNRC2Q9NPJ4 139 aaKnown RBP10.1□□□□□ -0.79
ERBB2-201ENST00000269571 NHP2Q9NX24 153 aaKnown RBP10.1□□□□□ -0.79
ERBB2-201ENST00000269571 CGB1A6NKQ9 187 aa10.09□□□□□ -0.79
ERBB2-201ENST00000269571 CLPSP04118 112 aa10.09□□□□□ -0.79
ERBB2-201ENST00000269571 C1orf147Q96MC9 270 aaPredicted RBP10.09□□□□□ -0.79
ERBB2-201ENST00000269571 ZNF714Q96N38 554 aa10.09□□□□□ -0.79
ERBB2-201ENST00000269571 HS3ST6Q96QI5 342 aa10.09□□□□□ -0.79
ERBB2-201ENST00000269571 MCRIP2Q9BUT9 160 aaKnown RBP10.09□□□□□ -0.79
ERBB2-201ENST00000269571 C1QTNF5Q9BXJ0 243 aa10.09□□□□□ -0.79
ERBB2-201ENST00000269571 KLK15Q9H2R5 256 aa10.09□□□□□ -0.79
ERBB2-201ENST00000269571 IFNL4K9M1U5 179 aa10.09□□□□□ -0.79
ERBB2-201ENST00000269571 APOMO95445 188 aa10.09□□□□□ -0.79
ERBB2-201ENST00000269571 IL4P05112 153 aa10.09□□□□□ -0.79
ERBB2-201ENST00000269571 CELA3BP08861 270 aa10.09□□□□□ -0.79
ERBB2-201ENST00000269571 SPINK8P0C7L1 97 aa10.09□□□□□ -0.79
ERBB2-201ENST00000269571 HTN1P15515 57 aa10.09□□□□□ -0.79
ERBB2-201ENST00000269571 TBR1Q16650 682 aa10.09□□□□□ -0.79
ERBB2-201ENST00000269571 LYPD6BQ8NI32 183 aa10.09□□□□□ -0.79
ERBB2-201ENST00000269571 ZNF502Q8TBZ5 544 aa10.09□□□□□ -0.79
ERBB2-201ENST00000269571 MRAP2Q96G30 205 aa10.09□□□□□ -0.79
ERBB2-201ENST00000269571 CLEC7AQ9BXN2 247 aa10.09□□□□□ -0.79
ERBB2-201ENST00000269571 RPL27AP46776 148 aaKnown RBP10.09□□□□□ -0.79
ERBB2-201ENST00000269571 GNG5P63218 68 aa10.09□□□□□ -0.79
ERBB2-201ENST00000269571 ECSCRQ19T08 205 aa10.09□□□□□ -0.79
ERBB2-201ENST00000269571 MBNL2Q5VZF2 373 aaKnown RBP10.09□□□□□ -0.79
ERBB2-201ENST00000269571 FAM181BA6NEQ2 426 aa10.08□□□□□ -0.8
ERBB2-201ENST00000269571 H7C2G1 150 aa10.08□□□□□ -0.8
ERBB2-201ENST00000269571 TDRG1Q3Y452 100 aa10.08□□□□□ -0.8
ERBB2-201ENST00000269571 SLC25A53Q5H9E4 307 aa10.08□□□□□ -0.8
ERBB2-201ENST00000269571 OR4X2Q8NGF9 303 aa10.08□□□□□ -0.8
ERBB2-201ENST00000269571 ZFAND6Q6FIF0 208 aa10.08□□□□□ -0.8
ERBB2-201ENST00000269571 ZIC4Q8N9L1 334 aa10.08□□□□□ -0.8
ERBB2-201ENST00000269571 TMEM189A5PLL7 270 aa10.08□□□□□ -0.8
ERBB2-201ENST00000269571 CDX4O14627 284 aaPredicted RBP10.08□□□□□ -0.8
ERBB2-201ENST00000269571 APOHP02749 345 aaPredicted RBP10.08□□□□□ -0.8
ERBB2-201ENST00000269571 ZNF441Q8N8Z8 693 aa10.08□□□□□ -0.8
ERBB2-201ENST00000269571 FDCSPQ8NFU4 85 aa10.08□□□□□ -0.8
ERBB2-201ENST00000269571 MS4A6AQ9H2W1 248 aa10.08□□□□□ -0.8
ERBB2-201ENST00000269571 F2RL2O00254 374 aa10.08□□□□□ -0.8
ERBB2-201ENST00000269571 CCL21O00585 134 aa10.08□□□□□ -0.8
ERBB2-201ENST00000269571 SAP30O75446 220 aa10.08□□□□□ -0.8
ERBB2-201ENST00000269571 PYYP10082 97 aa10.08□□□□□ -0.8
ERBB2-201ENST00000269571 RPL30P62888 115 aaKnown RBP10.08□□□□□ -0.8
ERBB2-201ENST00000269571 LINC00305Q7Z4B0 112 aa10.08□□□□□ -0.8
ERBB2-201ENST00000269571 NABP1Q96AH0 204 aa10.08□□□□□ -0.8
ERBB2-201ENST00000269571 DLL1O00548 723 aa10.07□□□□□ -0.8
ERBB2-201ENST00000269571 GAGE13Q4V321 117 aa10.07□□□□□ -0.8
ERBB2-201ENST00000269571 SLC25A33Q9BSK2 321 aa10.07□□□□□ -0.8
ERBB2-201ENST00000269571 VCX2Q9H322 139 aa10.07□□□□□ -0.8
ERBB2-201ENST00000269571 WDR83OSQ9Y284 106 aa10.07□□□□□ -0.8
ERBB2-201ENST00000269571 PCNX2A6NKB5 2137 aa10.07□□□□□ -0.8
ERBB2-201ENST00000269571 TRAV8-6A0A0B4J262 113 aa10.07□□□□□ -0.8
ERBB2-201ENST00000269571 AHRRA9YTQ3 701 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms