RNA–Protein interactions for RNA: ENST00000269347.10

RAB40B-201, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 2,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-201ENST00000269347 EFNA4P52798 201 aa18.47■□□□□ 0.55
RAB40B-201ENST00000269347 CST9LP1Q5W188 147 aa18.47■□□□□ 0.55
RAB40B-201ENST00000269347 BBC3Q96PG8 261 aaPredicted RBP18.47■□□□□ 0.55
RAB40B-201ENST00000269347 DPM3Q9P2X0 92 aa18.47■□□□□ 0.55
RAB40B-201ENST00000269347 NAT8Q9UHE5 227 aa18.47■□□□□ 0.55
RAB40B-201ENST00000269347 OVOL3O00110 214 aa18.47■□□□□ 0.55
RAB40B-201ENST00000269347 S100A8P05109 93 aa18.47■□□□□ 0.55
RAB40B-201ENST00000269347 GCHFRP30047 84 aa18.47■□□□□ 0.55
RAB40B-201ENST00000269347 MMD2Q8IY49 270 aa18.47■□□□□ 0.55
RAB40B-201ENST00000269347 TMEM250H0YL14 139 aa18.46■□□□□ 0.55
RAB40B-201ENST00000269347 CLDN34H7C241 214 aa18.46■□□□□ 0.55
RAB40B-201ENST00000269347 RPL23P62829 140 aaKnown RBP18.46■□□□□ 0.55
RAB40B-201ENST00000269347 AMMECR1Q9Y4X0 333 aaPredicted RBP18.46■□□□□ 0.55
RAB40B-201ENST00000269347 ZNF462Q96JM2 2506 aa18.46■□□□□ 0.55
RAB40B-201ENST00000269347 PGPEP1LA6NFU8 196 aa18.45■□□□□ 0.54
RAB40B-201ENST00000269347 HOXB4P17483 251 aaPredicted RBP18.45■□□□□ 0.54
RAB40B-201ENST00000269347 AURKAIP1Q9NWT8 199 aaPredicted RBP18.45■□□□□ 0.54
RAB40B-201ENST00000269347 TRAV5A0A0B4J249 113 aa18.45■□□□□ 0.54
RAB40B-201ENST00000269347 CXorf1O96002 111 aa18.45■□□□□ 0.54
RAB40B-201ENST00000269347 IGHV4-39P01824 125 aa18.45■□□□□ 0.54
RAB40B-201ENST00000269347 GPX4P36969 197 aaPredicted RBP18.45■□□□□ 0.54
RAB40B-201ENST00000269347 ATP5IP56385 69 aaPredicted RBP18.45■□□□□ 0.54
RAB40B-201ENST00000269347 LMO4P61968 165 aa18.45■□□□□ 0.54
RAB40B-201ENST00000269347 RAB31Q13636 194 aa18.45■□□□□ 0.54
RAB40B-201ENST00000269347 SSX2Q16385 188 aa18.45■□□□□ 0.54
RAB40B-201ENST00000269347 PVRIGQ6DKI7 326 aa18.45■□□□□ 0.54
RAB40B-201ENST00000269347 CYP2G1PQ6ZSU1 146 aa18.45■□□□□ 0.54
RAB40B-201ENST00000269347 ZNF114Q8NC26 417 aa18.45■□□□□ 0.54
RAB40B-201ENST00000269347 GSX1Q9H4S2 264 aaPredicted RBP18.45■□□□□ 0.54
RAB40B-201ENST00000269347 RND2P52198 227 aa18.44■□□□□ 0.54
RAB40B-201ENST00000269347 RHOBP62745 196 aa18.44■□□□□ 0.54
RAB40B-201ENST00000269347 ADIRFQ15847 76 aa18.44■□□□□ 0.54
RAB40B-201ENST00000269347 TMEM241Q24JQ0 296 aa18.44■□□□□ 0.54
RAB40B-201ENST00000269347 CACNG8Q8WXS5 425 aa18.44■□□□□ 0.54
RAB40B-201ENST00000269347 SLC25A33Q9BSK2 321 aa18.44■□□□□ 0.54
RAB40B-201ENST00000269347 SIRPDQ9H106 197 aa18.44■□□□□ 0.54
RAB40B-201ENST00000269347 PATE2Q6UY27 113 aa18.44■□□□□ 0.54
RAB40B-201ENST00000269347 MISP3Q96FF7 219 aa18.44■□□□□ 0.54
RAB40B-201ENST00000269347 SLC35E1Q96K37 410 aa18.44■□□□□ 0.54
RAB40B-201ENST00000269347 CTDSP1Q9GZU7 261 aa18.44■□□□□ 0.54
RAB40B-201ENST00000269347 DOK5Q9P104 306 aa18.44■□□□□ 0.54
RAB40B-201ENST00000269347 FUT9Q9Y231 359 aa18.44■□□□□ 0.54
RAB40B-201ENST00000269347 TRBV20OR9-2A0A075B6H5 130 aa18.43■□□□□ 0.54
RAB40B-201ENST00000269347 NDUFB4O95168 129 aa18.43■□□□□ 0.54
RAB40B-201ENST00000269347 S100A9P06702 114 aaKnown RBP18.43■□□□□ 0.54
RAB40B-201ENST00000269347 RNASEH2CQ8TDP1 164 aaKnown RBP18.43■□□□□ 0.54
RAB40B-201ENST00000269347 SRSF12Q8WXF0 261 aaKnown RBP18.43■□□□□ 0.54
RAB40B-201ENST00000269347 FAM103A1Q9BTL3 118 aaKnown RBP18.43■□□□□ 0.54
RAB40B-201ENST00000269347 SCO2A0A1W2PP80 73 aa18.42■□□□□ 0.54
RAB40B-201ENST00000269347 MMDQ15546 238 aa18.42■□□□□ 0.54
RAB40B-201ENST00000269347 KCNIP2Q9NS61 270 aa18.42■□□□□ 0.54
RAB40B-201ENST00000269347 FBN2P35556 2912 aa18.42■□□□□ 0.54
RAB40B-201ENST00000269347 NDUFS6O75380 124 aaKnown RBP18.42■□□□□ 0.54
RAB40B-201ENST00000269347 MOSP00540 346 aa18.42■□□□□ 0.54
RAB40B-201ENST00000269347 CRYGCP07315 174 aa18.42■□□□□ 0.54
RAB40B-201ENST00000269347 SMIM6P0DI80 62 aa18.42■□□□□ 0.54
RAB40B-201ENST00000269347 AJUBAQ96IF1 538 aa18.42■□□□□ 0.54
RAB40B-201ENST00000269347 EAF1Q96JC9 268 aaPredicted RBP18.42■□□□□ 0.54
RAB40B-201ENST00000269347 FAM210BQ96KR6 192 aa18.42■□□□□ 0.54
RAB40B-201ENST00000269347 UHRF2Q96PU4 802 aa18.42■□□□□ 0.54
RAB40B-201ENST00000269347 TCEAL7Q9BRU2 100 aa18.42■□□□□ 0.54
RAB40B-201ENST00000269347 OR5G3P0C626 314 aa18.41■□□□□ 0.54
RAB40B-201ENST00000269347 OR10J4P0C629 311 aa18.4■□□□□ 0.54
RAB40B-201ENST00000269347 THAP8Q8NA92 274 aa18.4■□□□□ 0.54
RAB40B-201ENST00000269347 OR5T1Q8NG75 326 aa18.4■□□□□ 0.54
RAB40B-201ENST00000269347 FAM167A-AS1Q96KT0 104 aa18.4■□□□□ 0.54
RAB40B-201ENST00000269347 TBX15Q96SF7 602 aa18.4■□□□□ 0.54
RAB40B-201ENST00000269347 LPAR2Q9HBW0 351 aa18.4■□□□□ 0.54
RAB40B-201ENST00000269347 EPG5Q9HCE0 2579 aa18.39■□□□□ 0.54
RAB40B-201ENST00000269347 C16orf82Q7Z2V1 217 aa18.39■□□□□ 0.53
RAB40B-201ENST00000269347 IGHV2-70DA0A0C4DH43 119 aa18.38■□□□□ 0.53
RAB40B-201ENST00000269347 TRGC2P03986 189 aa18.38■□□□□ 0.53
RAB40B-201ENST00000269347 SNRPCP09234 159 aaKnown RBP18.38■□□□□ 0.53
RAB40B-201ENST00000269347 SUB1P53999 127 aaKnown RBP eCLIP18.38■□□□□ 0.53
RAB40B-201ENST00000269347 NDUFA6P56556 154 aa18.38■□□□□ 0.53
RAB40B-201ENST00000269347 PLGLAQ15195 96 aa18.38■□□□□ 0.53
RAB40B-201ENST00000269347 ELOVL1Q9BW60 279 aa18.38■□□□□ 0.53
RAB40B-201ENST00000269347 SLC25A2Q9BXI2 301 aa18.38■□□□□ 0.53
RAB40B-201ENST00000269347 F11RQ9Y624 299 aaKnown RBP18.38■□□□□ 0.53
RAB40B-201ENST00000269347 TCRBV4S1A1TA0A5B7 111 aa18.38■□□□□ 0.53
RAB40B-201ENST00000269347 C1orf122Q6ZSJ8 110 aa18.38■□□□□ 0.53
RAB40B-201ENST00000269347 NANPQ8TBE9 248 aa18.38■□□□□ 0.53
RAB40B-201ENST00000269347 NBR2O15453 112 aa18.37■□□□□ 0.53
RAB40B-201ENST00000269347 CLN5O75503 358 aa18.37■□□□□ 0.53
RAB40B-201ENST00000269347 NDUFA3O95167 84 aa18.37■□□□□ 0.53
RAB40B-201ENST00000269347 TRBV24-1A0A075B6N3 115 aa18.37■□□□□ 0.53
RAB40B-201ENST00000269347 MT-CO2P00403 227 aa18.37■□□□□ 0.53
RAB40B-201ENST00000269347 HOXA5P20719 270 aa18.37■□□□□ 0.53
RAB40B-201ENST00000269347 NDPQ00604 133 aa18.37■□□□□ 0.53
RAB40B-201ENST00000269347 HES1Q14469 280 aa18.37■□□□□ 0.53
RAB40B-201ENST00000269347 KIR3DL3Q8N743 410 aa18.37■□□□□ 0.53
RAB40B-201ENST00000269347 NECAP1Q8NC96 275 aa18.37■□□□□ 0.53
RAB40B-201ENST00000269347 NPBQ8NG41 125 aa18.37■□□□□ 0.53
RAB40B-201ENST00000269347 OR1P1Q8NH06 330 aa18.37■□□□□ 0.53
RAB40B-201ENST00000269347 TGOLN2O43493 480 aa18.36■□□□□ 0.53
RAB40B-201ENST00000269347 HIST1H2BKO60814 126 aa18.36■□□□□ 0.53
RAB40B-201ENST00000269347 HIST1H2BJP06899 126 aa18.36■□□□□ 0.53
RAB40B-201ENST00000269347 HIST1H2BOP23527 126 aa18.36■□□□□ 0.53
RAB40B-201ENST00000269347 HIST1H2BBP33778 126 aa18.36■□□□□ 0.53
RAB40B-201ENST00000269347 HIST1H2BDP58876 126 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms