RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 DMRTA2Q96SC8 542 aa12.74□□□□□ -0.37
TIMP3-201ENST00000266085 FAM159AQ6UWV7 190 aa12.74□□□□□ -0.37
TIMP3-201ENST00000266085 NUP37Q8NFH4 326 aa12.74□□□□□ -0.37
TIMP3-201ENST00000266085 KIAA1671Q9BY89 1806 aa12.74□□□□□ -0.37
TIMP3-201ENST00000266085 TMEM200BQ69YZ2 307 aa12.74□□□□□ -0.37
TIMP3-201ENST00000266085 FAM169BQ8N8A8 192 aa12.74□□□□□ -0.37
TIMP3-201ENST00000266085 YAE1D1Q9NRH1 226 aa12.74□□□□□ -0.37
TIMP3-201ENST00000266085 M0QZK8 103 aa12.74□□□□□ -0.37
TIMP3-201ENST00000266085 IGKV3-20P01619 116 aa12.74□□□□□ -0.37
TIMP3-201ENST00000266085 SMAGPQ0VAQ4 97 aa12.74□□□□□ -0.37
TIMP3-201ENST00000266085 TRBV6-6A0A0A6YYG2 114 aa12.73□□□□□ -0.37
TIMP3-201ENST00000266085 TRAV40A0A0B4J280 105 aa12.73□□□□□ -0.37
TIMP3-201ENST00000266085 CBLN1P23435 193 aa12.73□□□□□ -0.37
TIMP3-201ENST00000266085 LYRM7Q5U5X0 104 aa12.73□□□□□ -0.37
TIMP3-201ENST00000266085 AP5S1Q9NUS5 200 aa12.73□□□□□ -0.37
TIMP3-201ENST00000266085 HLA-DRB1P01911 266 aa12.73□□□□□ -0.37
TIMP3-201ENST00000266085 COLCA1Q6ZS62 124 aa12.73□□□□□ -0.37
TIMP3-201ENST00000266085 NUP210Q8TEM1 1887 aaPredicted RBP12.73□□□□□ -0.37
TIMP3-201ENST00000266085 IGHV1-8P0DP01 117 aa12.73□□□□□ -0.37
TIMP3-201ENST00000266085 HBBP68871 147 aa12.73□□□□□ -0.37
TIMP3-201ENST00000266085 FAM53AQ6NSI3 398 aaPredicted RBP12.73□□□□□ -0.37
TIMP3-201ENST00000266085 IGF2RP11717 2491 aa12.73□□□□□ -0.37
TIMP3-201ENST00000266085 NPFFR1Q9GZQ6 430 aa12.73□□□□□ -0.37
TIMP3-201ENST00000266085 PLXND1Q9Y4D7 1925 aa12.72□□□□□ -0.37
TIMP3-201ENST00000266085 IGHV2-26A0A0B4J1V2 119 aa12.72□□□□□ -0.37
TIMP3-201ENST00000266085 Q6P435 159 aa12.72□□□□□ -0.37
TIMP3-201ENST00000266085 GRIFINA4D1Z8 144 aa12.72□□□□□ -0.37
TIMP3-201ENST00000266085 SLC17A3O00476 420 aa12.72□□□□□ -0.37
TIMP3-201ENST00000266085 TAS2R60P59551 318 aa12.72□□□□□ -0.37
TIMP3-201ENST00000266085 NMSQ5H8A3 153 aa12.72□□□□□ -0.37
TIMP3-201ENST00000266085 COQ2Q96H96 371 aa12.72□□□□□ -0.37
TIMP3-201ENST00000266085 ZNF257Q9Y2Q1 563 aa12.72□□□□□ -0.37
TIMP3-201ENST00000266085 IGKV1D-17A0A075B6S4 117 aa12.72□□□□□ -0.37
TIMP3-201ENST00000266085 CDX1P47902 265 aaPredicted RBP12.72□□□□□ -0.37
TIMP3-201ENST00000266085 C10orf55Q5SWW7 151 aa12.72□□□□□ -0.37
TIMP3-201ENST00000266085 SDF2L1Q9HCN8 221 aa12.72□□□□□ -0.37
TIMP3-201ENST00000266085 MED13Q9UHV7 2174 aa12.71□□□□□ -0.37
TIMP3-201ENST00000266085 PVRIGQ6DKI7 326 aa12.71□□□□□ -0.37
TIMP3-201ENST00000266085 OR4X2Q8NGF9 303 aa12.71□□□□□ -0.37
TIMP3-201ENST00000266085 ZNF502Q8TBZ5 544 aa12.71□□□□□ -0.37
TIMP3-201ENST00000266085 RNF125Q96EQ8 232 aa12.71□□□□□ -0.37
TIMP3-201ENST00000266085 YLPM1P49750 1951 aaKnown RBP12.71□□□□□ -0.37
TIMP3-201ENST00000266085 WDR87Q6ZQQ6 2873 aa12.71□□□□□ -0.37
TIMP3-201ENST00000266085 DENND4CQ5VZ89 1909 aa12.71□□□□□ -0.37
TIMP3-201ENST00000266085 PF4P02776 101 aa12.71□□□□□ -0.37
TIMP3-201ENST00000266085 NMUP48645 174 aa12.71□□□□□ -0.37
TIMP3-201ENST00000266085 PMCHL1Q16048 86 aa12.71□□□□□ -0.37
TIMP3-201ENST00000266085 ASCL4Q6XD76 172 aa12.71□□□□□ -0.37
TIMP3-201ENST00000266085 TCRBV4S1A1TA0A5B7 111 aa12.71□□□□□ -0.38
TIMP3-201ENST00000266085 E7EQL1 145 aa12.71□□□□□ -0.38
TIMP3-201ENST00000266085 GGCTO75223 188 aaKnown RBP12.71□□□□□ -0.38
TIMP3-201ENST00000266085 ZNF418Q8TF45 676 aaPredicted RBP12.71□□□□□ -0.38
TIMP3-201ENST00000266085 GPR82Q96P67 336 aa12.71□□□□□ -0.38
TIMP3-201ENST00000266085 CRIM1Q9NZV1 1036 aa12.71□□□□□ -0.38
TIMP3-201ENST00000266085 FGF16O43320 207 aa12.71□□□□□ -0.38
TIMP3-201ENST00000266085 NTF4P34130 210 aa12.71□□□□□ -0.38
TIMP3-201ENST00000266085 TCF15Q12870 199 aa12.71□□□□□ -0.38
TIMP3-201ENST00000266085 Q9H3A6 140 aa12.71□□□□□ -0.38
TIMP3-201ENST00000266085 IL36BQ9NZH7 164 aa12.71□□□□□ -0.38
TIMP3-201ENST00000266085 FAM74A4Q5TZK3 123 aa12.7□□□□□ -0.38
TIMP3-201ENST00000266085 C20orf204Q6ZNR8 217 aa12.7□□□□□ -0.38
TIMP3-201ENST00000266085 OR10W1Q8NGF6 305 aa12.7□□□□□ -0.38
TIMP3-201ENST00000266085 OR10AG1Q8NH19 301 aa12.7□□□□□ -0.38
TIMP3-201ENST00000266085 HS3ST6Q96QI5 342 aa12.7□□□□□ -0.38
TIMP3-201ENST00000266085 C1QTNF9BB2RNN3 333 aa12.7□□□□□ -0.38
TIMP3-201ENST00000266085 TNFSF13O75888 250 aa12.7□□□□□ -0.38
TIMP3-201ENST00000266085 IGKV1-5P01602 117 aa12.7□□□□□ -0.38
TIMP3-201ENST00000266085 C1QTNF9P0C862 333 aa12.7□□□□□ -0.38
TIMP3-201ENST00000266085 FOXA3P55318 350 aaPredicted RBP12.7□□□□□ -0.38
TIMP3-201ENST00000266085 RHOGP84095 191 aa12.7□□□□□ -0.38
TIMP3-201ENST00000266085 Q6ZS49 121 aa12.7□□□□□ -0.38
TIMP3-201ENST00000266085 NUDT3O95989 172 aa12.69□□□□□ -0.38
TIMP3-201ENST00000266085 WT1P19544 449 aaPredicted RBP12.69□□□□□ -0.38
TIMP3-201ENST00000266085 ZNF600Q6ZNG1 722 aa12.69□□□□□ -0.38
TIMP3-201ENST00000266085 WFDC1Q9HC57 220 aa12.69□□□□□ -0.38
TIMP3-201ENST00000266085 M0R3E3 92 aa12.69□□□□□ -0.38
TIMP3-201ENST00000266085 COL8A2P25067 703 aa12.69□□□□□ -0.38
TIMP3-201ENST00000266085 EFNB3Q15768 340 aa12.69□□□□□ -0.38
TIMP3-201ENST00000266085 A6NDN8 102 aa12.69□□□□□ -0.38
TIMP3-201ENST00000266085 ATRAIDQ6UW56 229 aa12.69□□□□□ -0.38
TIMP3-201ENST00000266085 CIARTQ8N365 385 aaPredicted RBP12.69□□□□□ -0.38
TIMP3-201ENST00000266085 GOLGB1Q14789 3259 aaKnown RBP12.69□□□□□ -0.38
TIMP3-201ENST00000266085 A0A1B0GUT8 65 aa12.69□□□□□ -0.38
TIMP3-201ENST00000266085 A0A1W2PRE2 83 aa12.69□□□□□ -0.38
TIMP3-201ENST00000266085 PSMB2P49721 201 aa12.69□□□□□ -0.38
TIMP3-201ENST00000266085 KLRD1Q13241 179 aa12.69□□□□□ -0.38
TIMP3-201ENST00000266085 OR1N2Q8NGR9 330 aa12.69□□□□□ -0.38
TIMP3-201ENST00000266085 FMC1Q96HJ9 113 aa12.69□□□□□ -0.38
TIMP3-201ENST00000266085 GAFA1Q96PS6 74 aa12.69□□□□□ -0.38
TIMP3-201ENST00000266085 LINC00527Q9UJ94 153 aa12.69□□□□□ -0.38
TIMP3-201ENST00000266085 A0A087WWC5 75 aa12.68□□□□□ -0.38
TIMP3-201ENST00000266085 NUTF2P61970 127 aaKnown RBP12.68□□□□□ -0.38
TIMP3-201ENST00000266085 CCL20P78556 96 aa12.68□□□□□ -0.38
TIMP3-201ENST00000266085 AMMECR1LQ6DCA0 310 aa12.68□□□□□ -0.38
TIMP3-201ENST00000266085 TRBV20OR9-2A0A075B6H5 130 aa12.68□□□□□ -0.38
TIMP3-201ENST00000266085 RPL23P62829 140 aaKnown RBP12.68□□□□□ -0.38
TIMP3-201ENST00000266085 PRSS8Q16651 343 aa12.68□□□□□ -0.38
TIMP3-201ENST00000266085 TREML4Q6UXN2 200 aa12.68□□□□□ -0.38
TIMP3-201ENST00000266085 PRSS22Q9GZN4 317 aa12.68□□□□□ -0.38
TIMP3-201ENST00000266085 ARFGEF3Q5TH69 2177 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms