RNA–Protein interactions for RNA: ENST00000264638.8

CNTNAP1-201, Transcript of contactin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTNAP1, Length 5,276 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1-201ENST00000264638 TIMP3P35625 211 aa11.16□□□□□ -0.62
CNTNAP1-201ENST00000264638 OR5AN1Q8NGI8 311 aa11.16□□□□□ -0.62
CNTNAP1-201ENST00000264638 SEMA5BQ9P283 1151 aa11.16□□□□□ -0.62
CNTNAP1-201ENST00000264638 GREB1Q4ZG55 1949 aa11.16□□□□□ -0.62
CNTNAP1-201ENST00000264638 ACACAQ13085 2346 aa11.16□□□□□ -0.62
CNTNAP1-201ENST00000264638 NDUFA3O95167 84 aa11.16□□□□□ -0.62
CNTNAP1-201ENST00000264638 CNTFRP26992 372 aa11.16□□□□□ -0.62
CNTNAP1-201ENST00000264638 BTCP35070 178 aa11.16□□□□□ -0.62
CNTNAP1-201ENST00000264638 VKORC1L1Q8N0U8 176 aa11.16□□□□□ -0.62
CNTNAP1-201ENST00000264638 WBP1Q96G27 269 aa11.16□□□□□ -0.62
CNTNAP1-201ENST00000264638 LEPP41159 167 aa11.16□□□□□ -0.62
CNTNAP1-201ENST00000264638 SNRPD3P62318 126 aaKnown RBP11.16□□□□□ -0.62
CNTNAP1-201ENST00000264638 PAX2Q02962 417 aa11.16□□□□□ -0.62
CNTNAP1-201ENST00000264638 PLPPR1Q8TBJ4 325 aa11.16□□□□□ -0.62
CNTNAP1-201ENST00000264638 COLCA2A8K830 154 aa11.15□□□□□ -0.62
CNTNAP1-201ENST00000264638 OR52E5Q8NH55 327 aa11.15□□□□□ -0.62
CNTNAP1-201ENST00000264638 RNF126Q9BV68 326 aa11.15□□□□□ -0.62
CNTNAP1-201ENST00000264638 MOSP00540 346 aa11.15□□□□□ -0.62
CNTNAP1-201ENST00000264638 TGFAP01135 160 aa11.15□□□□□ -0.62
CNTNAP1-201ENST00000264638 IGFBP2P18065 325 aa11.15□□□□□ -0.62
CNTNAP1-201ENST00000264638 NCOR1O75376 2440 aa11.15□□□□□ -0.62
CNTNAP1-201ENST00000264638 PPBPP02775 128 aa11.15□□□□□ -0.62
CNTNAP1-201ENST00000264638 NR2C2APQ86WQ0 139 aa11.15□□□□□ -0.62
CNTNAP1-201ENST00000264638 NXT2Q9NPJ8 142 aaKnown RBP11.15□□□□□ -0.62
CNTNAP1-201ENST00000264638 HAX1O00165 279 aa11.15□□□□□ -0.62
CNTNAP1-201ENST00000264638 ERVK11-1P61568 191 aa11.15□□□□□ -0.62
CNTNAP1-201ENST00000264638 SPRR3Q9UBC9 169 aa11.15□□□□□ -0.62
CNTNAP1-201ENST00000264638 CHD5Q8TDI0 1954 aa11.15□□□□□ -0.62
CNTNAP1-201ENST00000264638 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.15□□□□□ -0.63
CNTNAP1-201ENST00000264638 FAM181BA6NEQ2 426 aa11.15□□□□□ -0.63
CNTNAP1-201ENST00000264638 LYPD3O95274 346 aa11.15□□□□□ -0.63
CNTNAP1-201ENST00000264638 SMPXQ9UHP9 88 aa11.15□□□□□ -0.63
CNTNAP1-201ENST00000264638 A0A0G2JLM5 398 aa11.14□□□□□ -0.63
CNTNAP1-201ENST00000264638 CELA3BP08861 270 aa11.14□□□□□ -0.63
CNTNAP1-201ENST00000264638 AMBPP02760 352 aa11.14□□□□□ -0.63
CNTNAP1-201ENST00000264638 REG1AP05451 166 aa11.14□□□□□ -0.63
CNTNAP1-201ENST00000264638 RPL39P5Q59GN2 51 aa11.14□□□□□ -0.63
CNTNAP1-201ENST00000264638 OR13A1Q8NGR1 328 aa11.14□□□□□ -0.63
CNTNAP1-201ENST00000264638 RNASEH2CQ8TDP1 164 aaKnown RBP11.14□□□□□ -0.63
CNTNAP1-201ENST00000264638 SBF1O95248 1867 aa11.14□□□□□ -0.63
CNTNAP1-201ENST00000264638 LINC01549A6NIU2 74 aa11.14□□□□□ -0.63
CNTNAP1-201ENST00000264638 M0R381 172 aa11.14□□□□□ -0.63
CNTNAP1-201ENST00000264638 SMAD7O15105 426 aaKnown RBP11.14□□□□□ -0.63
CNTNAP1-201ENST00000264638 CD5P06127 495 aa11.14□□□□□ -0.63
CNTNAP1-201ENST00000264638 IGFBP3P17936 291 aaPredicted RBP11.14□□□□□ -0.63
CNTNAP1-201ENST00000264638 SRSF3P84103 164 aaKnown RBP11.14□□□□□ -0.63
CNTNAP1-201ENST00000264638 INTS1Q8N201 2190 aaKnown RBP11.14□□□□□ -0.63
CNTNAP1-201ENST00000264638 C7orf69Q9H7B7 122 aa11.14□□□□□ -0.63
CNTNAP1-201ENST00000264638 OTORQ9NRC9 128 aa11.14□□□□□ -0.63
CNTNAP1-201ENST00000264638 FBLN5Q9UBX5 448 aa11.14□□□□□ -0.63
CNTNAP1-201ENST00000264638 IGHV3OR16-10A0A075B7F0 116 aa11.13□□□□□ -0.63
CNTNAP1-201ENST00000264638 PSMB11A5LHX3 300 aa11.13□□□□□ -0.63
CNTNAP1-201ENST00000264638 PINLYPA6NC86 204 aa11.13□□□□□ -0.63
CNTNAP1-201ENST00000264638 CCL1P22362 96 aa11.13□□□□□ -0.63
CNTNAP1-201ENST00000264638 SRSF6Q13247 344 aaKnown RBP11.13□□□□□ -0.63
CNTNAP1-201ENST00000264638 FAM201AQ5SY85 155 aa11.13□□□□□ -0.63
CNTNAP1-201ENST00000264638 ATP5L2Q7Z4Y8 100 aa11.13□□□□□ -0.63
CNTNAP1-201ENST00000264638 A6NNC1 897 aa11.13□□□□□ -0.63
CNTNAP1-201ENST00000264638 C18orf12Q96KH6 178 aa11.13□□□□□ -0.63
CNTNAP1-201ENST00000264638 A0A1B0GW64 132 aa11.13□□□□□ -0.63
CNTNAP1-201ENST00000264638 MPZP25189 248 aa11.13□□□□□ -0.63
CNTNAP1-201ENST00000264638 ZIC4Q8N9L1 334 aa11.13□□□□□ -0.63
CNTNAP1-201ENST00000264638 TMEM190Q8WZ59 177 aa11.13□□□□□ -0.63
CNTNAP1-201ENST00000264638 ZNF646O15015 1829 aaPredicted RBP11.13□□□□□ -0.63
CNTNAP1-201ENST00000264638 IGHV4-39P01824 125 aa11.13□□□□□ -0.63
CNTNAP1-201ENST00000264638 TRGV3P03979 118 aa11.13□□□□□ -0.63
CNTNAP1-201ENST00000264638 ATXN8Q156A1 80 aa11.13□□□□□ -0.63
CNTNAP1-201ENST00000264638 GTF3AQ92664 365 aaKnown RBP11.13□□□□□ -0.63
CNTNAP1-201ENST00000264638 C1QTNF9P0C862 333 aa11.12□□□□□ -0.63
CNTNAP1-201ENST00000264638 SRSF1Q07955 248 aaKnown RBP eCLIP11.12□□□□□ -0.63
CNTNAP1-201ENST00000264638 SLC25A15Q9Y619 301 aa11.12□□□□□ -0.63
CNTNAP1-201ENST00000264638 PF4P02776 101 aa11.12□□□□□ -0.63
CNTNAP1-201ENST00000264638 PAX1P15863 534 aa11.12□□□□□ -0.63
CNTNAP1-201ENST00000264638 PLNP26678 52 aa11.12□□□□□ -0.63
CNTNAP1-201ENST00000264638 SRSF4Q08170 494 aaKnown RBP11.12□□□□□ -0.63
CNTNAP1-201ENST00000264638 LY6G6FQ5SQ64 297 aa11.12□□□□□ -0.63
CNTNAP1-201ENST00000264638 MIR17HGQ75NE6 70 aa11.12□□□□□ -0.63
CNTNAP1-201ENST00000264638 COQ2Q96H96 371 aa11.12□□□□□ -0.63
CNTNAP1-201ENST00000264638 A0A1W2PRE2 83 aa11.12□□□□□ -0.63
CNTNAP1-201ENST00000264638 PLSCR4Q9NRQ2 329 aa11.12□□□□□ -0.63
CNTNAP1-201ENST00000264638 IGHV3OR16-12A0A075B7B8 117 aa11.12□□□□□ -0.63
CNTNAP1-201ENST00000264638 IGKCP01834 107 aa11.12□□□□□ -0.63
CNTNAP1-201ENST00000264638 UBE2V1Q13404 147 aa11.12□□□□□ -0.63
CNTNAP1-201ENST00000264638 TMEM144Q7Z5S9 345 aa11.12□□□□□ -0.63
CNTNAP1-201ENST00000264638 Q9H3A6 140 aa11.12□□□□□ -0.63
CNTNAP1-201ENST00000264638 THADAQ6YHU6 1953 aa11.11□□□□□ -0.63
CNTNAP1-201ENST00000264638 IGKV3OR2-268A0A0C4DH90 116 aa11.11□□□□□ -0.63
CNTNAP1-201ENST00000264638 ORMDL2Q53FV1 153 aa11.11□□□□□ -0.63
CNTNAP1-201ENST00000264638 THSD7BQ9C0I4 1608 aa11.11□□□□□ -0.63
CNTNAP1-201ENST00000264638 LY6DQ14210 128 aa11.11□□□□□ -0.63
CNTNAP1-201ENST00000264638 PEAR1Q5VY43 1037 aaPredicted RBP11.11□□□□□ -0.63
CNTNAP1-201ENST00000264638 RNF182Q8N6D2 247 aa11.11□□□□□ -0.63
CNTNAP1-201ENST00000264638 KIR3DL3Q8N743 410 aa11.11□□□□□ -0.63
CNTNAP1-201ENST00000264638 FBXL15Q9H469 300 aa11.11□□□□□ -0.63
CNTNAP1-201ENST00000264638 ESDP10768 282 aa11.11□□□□□ -0.63
CNTNAP1-201ENST00000264638 MAJINQ3KP22 176 aa11.11□□□□□ -0.63
CNTNAP1-201ENST00000264638 DMRTA2Q96SC8 542 aa11.11□□□□□ -0.63
CNTNAP1-201ENST00000264638 ASCL2Q99929 193 aa11.11□□□□□ -0.63
CNTNAP1-201ENST00000264638 NPFFR1Q9GZQ6 430 aa11.11□□□□□ -0.63
CNTNAP1-201ENST00000264638 RNASE7Q9H1E1 156 aaKnown RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms