RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 SCARB1Q8WTV0 552 aa7.59□□□□□ -1.2
SNRNP40-201ENST00000263694 NPIPB3Q92617 1050 aa7.59□□□□□ -1.2
SNRNP40-201ENST00000263694 UQCC1Q9NVA1 299 aa7.59□□□□□ -1.2
SNRNP40-201ENST00000263694 IGKV1OR2-108A0A075B7D4 117 aa7.58□□□□□ -1.2
SNRNP40-201ENST00000263694 PSMB11A5LHX3 300 aa7.58□□□□□ -1.2
SNRNP40-201ENST00000263694 CFDP00746 253 aaPredicted RBP7.58□□□□□ -1.2
SNRNP40-201ENST00000263694 IGLV1-40P01703 118 aa7.58□□□□□ -1.2
SNRNP40-201ENST00000263694 GPX4P36969 197 aaPredicted RBP7.58□□□□□ -1.2
SNRNP40-201ENST00000263694 RND2P52198 227 aa7.58□□□□□ -1.2
SNRNP40-201ENST00000263694 TPPP2P59282 170 aa7.58□□□□□ -1.2
SNRNP40-201ENST00000263694 RUNX1Q01196 453 aa7.58□□□□□ -1.2
SNRNP40-201ENST00000263694 C15orf32Q32M92 178 aa7.58□□□□□ -1.2
SNRNP40-201ENST00000263694 UBAC2Q8NBM4 344 aa7.58□□□□□ -1.2
SNRNP40-201ENST00000263694 HSD17B11Q8NBQ5 300 aa7.58□□□□□ -1.2
SNRNP40-201ENST00000263694 TMEM147Q9BVK8 224 aa7.58□□□□□ -1.2
SNRNP40-201ENST00000263694 TAAR5O14804 337 aa7.57□□□□□ -1.2
SNRNP40-201ENST00000263694 IGHV3-11P01762 117 aa7.57□□□□□ -1.2
SNRNP40-201ENST00000263694 IGHG4P01861 327 aa7.57□□□□□ -1.2
SNRNP40-201ENST00000263694 RPLP1P05386 114 aaKnown RBP7.57□□□□□ -1.2
SNRNP40-201ENST00000263694 MDKP21741 143 aaPredicted RBP7.57□□□□□ -1.2
SNRNP40-201ENST00000263694 FGF7P21781 194 aa7.57□□□□□ -1.2
SNRNP40-201ENST00000263694 RAB9AP51151 201 aa7.57□□□□□ -1.2
SNRNP40-201ENST00000263694 AKR1C1Q04828 323 aa7.57□□□□□ -1.2
SNRNP40-201ENST00000263694 ATP6V1FQ16864 119 aa7.57□□□□□ -1.2
SNRNP40-201ENST00000263694 VWC2Q2TAL6 325 aa7.57□□□□□ -1.2
SNRNP40-201ENST00000263694 ACSM6Q6P461 480 aa7.57□□□□□ -1.2
SNRNP40-201ENST00000263694 C11orf44Q8N8P7 122 aa7.57□□□□□ -1.2
SNRNP40-201ENST00000263694 OR1L6Q8NGR2 347 aa7.57□□□□□ -1.2
SNRNP40-201ENST00000263694 SLC35E1Q96K37 410 aa7.57□□□□□ -1.2
SNRNP40-201ENST00000263694 RSG1Q9BU20 258 aa7.57□□□□□ -1.2
SNRNP40-201ENST00000263694 SH3BGRL3Q9H299 93 aa7.57□□□□□ -1.2
SNRNP40-201ENST00000263694 ZNF580Q9UK33 172 aa7.57□□□□□ -1.2
SNRNP40-201ENST00000263694 BORCS7-ASMTA0A0B4J1R7 106 aa7.56□□□□□ -1.2
SNRNP40-201ENST00000263694 F8W735 103 aaPredicted RBP7.56□□□□□ -1.2
SNRNP40-201ENST00000263694 CORTO00230 105 aa7.56□□□□□ -1.2
SNRNP40-201ENST00000263694 DFFBO76075 338 aa7.56□□□□□ -1.2
SNRNP40-201ENST00000263694 IFNA5P01569 189 aa7.56□□□□□ -1.2
SNRNP40-201ENST00000263694 HIST1H1BP16401 226 aaKnown RBP7.56□□□□□ -1.2
SNRNP40-201ENST00000263694 GATA2P23769 480 aaPredicted RBP7.56□□□□□ -1.2
SNRNP40-201ENST00000263694 PSMB8P28062 276 aa7.56□□□□□ -1.2
SNRNP40-201ENST00000263694 RPL15P61313 204 aaKnown RBP7.56□□□□□ -1.2
SNRNP40-201ENST00000263694 ATP5G2Q06055 141 aa7.56□□□□□ -1.2
SNRNP40-201ENST00000263694 EXOSC2Q13868 293 aaKnown RBP7.56□□□□□ -1.2
SNRNP40-201ENST00000263694 KIAA0141Q14154 515 aaPredicted RBP7.56□□□□□ -1.2
SNRNP40-201ENST00000263694 KLK9Q2XQG4 91 aa7.56□□□□□ -1.2
SNRNP40-201ENST00000263694 BTNL8Q6UX41 500 aa7.56□□□□□ -1.2
SNRNP40-201ENST00000263694 TMEM182Q6ZP80 229 aaPredicted RBP7.56□□□□□ -1.2
SNRNP40-201ENST00000263694 SLC51BQ86UW2 128 aa7.56□□□□□ -1.2
SNRNP40-201ENST00000263694 KLHDC1Q8N7A1 406 aa7.56□□□□□ -1.2
SNRNP40-201ENST00000263694 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.56□□□□□ -1.2
SNRNP40-201ENST00000263694 NECAP1Q8NC96 275 aa7.56□□□□□ -1.2
SNRNP40-201ENST00000263694 OR5AU1Q8NGC0 362 aa7.56□□□□□ -1.2
SNRNP40-201ENST00000263694 CACNG8Q8WXS5 425 aa7.56□□□□□ -1.2
SNRNP40-201ENST00000263694 ST8SIA2Q92186 375 aa7.56□□□□□ -1.2
SNRNP40-201ENST00000263694 OR5B12Q96R08 314 aa7.56□□□□□ -1.2
SNRNP40-201ENST00000263694 MGST2Q99735 147 aa7.56□□□□□ -1.2
SNRNP40-201ENST00000263694 GGACTQ9BVM4 153 aa7.56□□□□□ -1.2
SNRNP40-201ENST00000263694 WDR61Q9GZS3 305 aaKnown RBP7.56□□□□□ -1.2
SNRNP40-201ENST00000263694 C16orf95Q9H693 158 aa7.56□□□□□ -1.2
SNRNP40-201ENST00000263694 NPVFQ9HCQ7 196 aa7.56□□□□□ -1.2
SNRNP40-201ENST00000263694 KLK9Q9UKQ9 250 aa7.56□□□□□ -1.2
SNRNP40-201ENST00000263694 IGKV1D-37A0A075B6S9 117 aa7.55□□□□□ -1.2
SNRNP40-201ENST00000263694 RPS10-NUDT3A0A1W2PQS6 291 aa7.55□□□□□ -1.2
SNRNP40-201ENST00000263694 OR2T8A6NH00 312 aa7.55□□□□□ -1.2
SNRNP40-201ENST00000263694 CYB5BO43169 146 aa7.55□□□□□ -1.2
SNRNP40-201ENST00000263694 JTBO76095 146 aa7.55□□□□□ -1.2
SNRNP40-201ENST00000263694 ATP6V0CP27449 155 aa7.55□□□□□ -1.2
SNRNP40-201ENST00000263694 OR10J1P30954 320 aa7.55□□□□□ -1.2
SNRNP40-201ENST00000263694 SLC35B1P78383 322 aa7.55□□□□□ -1.2
SNRNP40-201ENST00000263694 IFITM2Q01629 132 aa7.55□□□□□ -1.2
SNRNP40-201ENST00000263694 TIGITQ495A1 244 aa7.55□□□□□ -1.2
SNRNP40-201ENST00000263694 Q56UQ5 140 aa7.55□□□□□ -1.2
SNRNP40-201ENST00000263694 TCTEX1D4Q5JR98 221 aa7.55□□□□□ -1.2
SNRNP40-201ENST00000263694 ETFRF1Q6IPR1 90 aa7.55□□□□□ -1.2
SNRNP40-201ENST00000263694 TEX38Q6PEX7 206 aa7.55□□□□□ -1.2
SNRNP40-201ENST00000263694 CLEC19AQ6UXS0 136 aa7.55□□□□□ -1.2
SNRNP40-201ENST00000263694 C18orf65Q6ZTR6 163 aa7.55□□□□□ -1.2
SNRNP40-201ENST00000263694 TMEM144Q7Z5S9 345 aa7.55□□□□□ -1.2
SNRNP40-201ENST00000263694 SCGB1C1Q8TD33 95 aa7.55□□□□□ -1.2
SNRNP40-201ENST00000263694 CCDC140Q96MF4 163 aa7.55□□□□□ -1.2
SNRNP40-201ENST00000263694 GON7Q9BXV9 100 aa7.55□□□□□ -1.2
SNRNP40-201ENST00000263694 C21orf62Q9NYP8 219 aa7.55□□□□□ -1.2
SNRNP40-201ENST00000263694 THYN1Q9P016 225 aa7.55□□□□□ -1.2
SNRNP40-201ENST00000263694 WDR83OSQ9Y284 106 aa7.55□□□□□ -1.2
SNRNP40-201ENST00000263694 LSM4Q9Y4Z0 139 aaKnown RBP7.55□□□□□ -1.2
SNRNP40-201ENST00000263694 ATRQ13535 2644 aa7.55□□□□□ -1.2
SNRNP40-201ENST00000263694 IGHV3-35A0A0C4DH35 117 aa7.54□□□□□ -1.2
SNRNP40-201ENST00000263694 ANKRD34BA5PLL1 514 aa7.54□□□□□ -1.2
SNRNP40-201ENST00000263694 PPP5D1E7EU14 171 aa7.54□□□□□ -1.2
SNRNP40-201ENST00000263694 NDUFA7O95182 113 aa7.54□□□□□ -1.2
SNRNP40-201ENST00000263694 TRBV12-3P01733 135 aa7.54□□□□□ -1.2
SNRNP40-201ENST00000263694 MFAP4P55083 255 aa7.54□□□□□ -1.2
SNRNP40-201ENST00000263694 ZNF90Q03938 601 aa7.54□□□□□ -1.2
SNRNP40-201ENST00000263694 ZNF266Q14584 549 aa7.54□□□□□ -1.2
SNRNP40-201ENST00000263694 TEPPQ6URK8 271 aa7.54□□□□□ -1.2
SNRNP40-201ENST00000263694 ALKAL2Q6UX46 152 aa7.54□□□□□ -1.2
SNRNP40-201ENST00000263694 PRIMA1Q86XR5 153 aa7.54□□□□□ -1.2
SNRNP40-201ENST00000263694 BAP18Q8IXM2 172 aa7.54□□□□□ -1.2
SNRNP40-201ENST00000263694 TMEM116Q8NCL8 245 aa7.54□□□□□ -1.2
SNRNP40-201ENST00000263694 OR4X1Q8NH49 305 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms