RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 FAM209BQ5JX69 171 aa10.12□□□□□ -0.79
SPG11-201ENST00000261866 TMEM42Q69YG0 159 aa10.12□□□□□ -0.79
SPG11-201ENST00000261866 PUSL1Q8N0Z8 303 aaKnown RBP10.12□□□□□ -0.79
SPG11-201ENST00000261866 OR10S1Q8NGN2 331 aa10.12□□□□□ -0.79
SPG11-201ENST00000261866 SCGB3A1Q96QR1 104 aa10.12□□□□□ -0.79
SPG11-201ENST00000261866 JMJD8Q96S16 334 aa10.12□□□□□ -0.79
SPG11-201ENST00000261866 TRGV4A0A0C4DH28 118 aa10.11□□□□□ -0.79
SPG11-201ENST00000261866 CRPP02741 224 aa10.11□□□□□ -0.79
SPG11-201ENST00000261866 MST1P26927 711 aa10.11□□□□□ -0.79
SPG11-201ENST00000261866 ERVK11-1P61568 191 aa10.11□□□□□ -0.79
SPG11-201ENST00000261866 FAM169BQ8N8A8 192 aa10.11□□□□□ -0.79
SPG11-201ENST00000261866 COL8A2P25067 703 aa10.11□□□□□ -0.79
SPG11-201ENST00000261866 RPL15P61313 204 aaKnown RBP10.11□□□□□ -0.79
SPG11-201ENST00000261866 MEF2CQ06413 473 aaPredicted RBP10.11□□□□□ -0.79
SPG11-201ENST00000261866 FBLIM1Q8WUP2 373 aa10.11□□□□□ -0.79
SPG11-201ENST00000261866 OR9G9P0C7N8 305 aa10.11□□□□□ -0.79
SPG11-201ENST00000261866 RUSC1-AS1Q66K80 236 aa10.11□□□□□ -0.79
SPG11-201ENST00000261866 DOCK6Q96HP0 2047 aa10.11□□□□□ -0.79
SPG11-201ENST00000261866 WNT2P09544 360 aa10.11□□□□□ -0.79
SPG11-201ENST00000261866 GTF3C1Q12789 2109 aa10.11□□□□□ -0.79
SPG11-201ENST00000261866 TMEM200BQ69YZ2 307 aa10.11□□□□□ -0.79
SPG11-201ENST00000261866 REC114Q7Z4M0 266 aa10.11□□□□□ -0.79
SPG11-201ENST00000261866 TM2D1Q9BX74 207 aa10.11□□□□□ -0.79
SPG11-201ENST00000261866 MRPS16Q9Y3D3 137 aaKnown RBP10.11□□□□□ -0.79
SPG11-201ENST00000261866 IGKV1-9A0A0C4DH69 117 aa10.11□□□□□ -0.79
SPG11-201ENST00000261866 FAM90A1Q86YD7 464 aa10.11□□□□□ -0.79
SPG11-201ENST00000261866 SLC25A28Q96A46 364 aa10.11□□□□□ -0.79
SPG11-201ENST00000261866 SDF2L1Q9HCN8 221 aa10.11□□□□□ -0.79
SPG11-201ENST00000261866 LSM4Q9Y4Z0 139 aaKnown RBP10.11□□□□□ -0.79
SPG11-201ENST00000261866 IFI6P09912 130 aa10.11□□□□□ -0.79
SPG11-201ENST00000261866 JOSD1Q15040 202 aaPredicted RBP10.11□□□□□ -0.79
SPG11-201ENST00000261866 PMCHL1Q16048 86 aa10.11□□□□□ -0.79
SPG11-201ENST00000261866 KLF17Q5JT82 389 aaPredicted RBP10.11□□□□□ -0.79
SPG11-201ENST00000261866 STPG2Q8N412 459 aa10.11□□□□□ -0.79
SPG11-201ENST00000261866 RPRMQ9NS64 109 aa10.11□□□□□ -0.79
SPG11-201ENST00000261866 C5orf63A6NC05 138 aa10.1□□□□□ -0.79
SPG11-201ENST00000261866 NMBP08949 121 aa10.1□□□□□ -0.79
SPG11-201ENST00000261866 MYOD1P15172 320 aa10.1□□□□□ -0.79
SPG11-201ENST00000261866 IL17RELQ6ZVW7 336 aa10.1□□□□□ -0.79
SPG11-201ENST00000261866 ASCL2Q99929 193 aa10.1□□□□□ -0.79
SPG11-201ENST00000261866 H3BUX3 64 aa10.1□□□□□ -0.79
SPG11-201ENST00000261866 J3QW42 95 aa10.1□□□□□ -0.79
SPG11-201ENST00000261866 TCF24Q7RTU0 167 aa10.1□□□□□ -0.79
SPG11-201ENST00000261866 RPRMLQ8N4K4 120 aa10.1□□□□□ -0.79
SPG11-201ENST00000261866 MRPS18CQ9Y3D5 142 aaKnown RBP10.1□□□□□ -0.79
SPG11-201ENST00000261866 LINC00205P59089 165 aa10.1□□□□□ -0.79
SPG11-201ENST00000261866 FAM166AQ6J272 317 aa10.1□□□□□ -0.79
SPG11-201ENST00000261866 UCP3P55916 312 aa10.1□□□□□ -0.79
SPG11-201ENST00000261866 IGFL4Q6B9Z1 124 aa10.1□□□□□ -0.79
SPG11-201ENST00000261866 FAM19A2Q8N3H0 131 aa10.1□□□□□ -0.79
SPG11-201ENST00000261866 GATAD1Q8WUU5 269 aa10.1□□□□□ -0.79
SPG11-201ENST00000261866 OR10AG1Q8NH19 301 aa10.1□□□□□ -0.79
SPG11-201ENST00000261866 IGHV2-26A0A0B4J1V2 119 aa10.1□□□□□ -0.79
SPG11-201ENST00000261866 RAB9AP51151 201 aa10.1□□□□□ -0.79
SPG11-201ENST00000261866 SRSF4Q08170 494 aaKnown RBP10.1□□□□□ -0.79
SPG11-201ENST00000261866 ZNF497Q6ZNH5 498 aa10.1□□□□□ -0.79
SPG11-201ENST00000261866 NPIPB13A6NJU9 1138 aa10.09□□□□□ -0.79
SPG11-201ENST00000261866 CDK2AP2O75956 126 aa10.09□□□□□ -0.79
SPG11-201ENST00000261866 NAT1P18440 290 aa10.09□□□□□ -0.79
SPG11-201ENST00000261866 RCC1LQ96I51 464 aaKnown RBP10.09□□□□□ -0.79
SPG11-201ENST00000261866 ZDBF2Q9HCK1 2354 aa10.09□□□□□ -0.79
SPG11-201ENST00000261866 MPDZO75970 2070 aa10.09□□□□□ -0.79
SPG11-201ENST00000261866 TRAV5A0A0B4J249 113 aa10.09□□□□□ -0.79
SPG11-201ENST00000261866 UPK2O00526 184 aa10.09□□□□□ -0.79
SPG11-201ENST00000261866 DANCRP0C864 163 aa10.09□□□□□ -0.79
SPG11-201ENST00000261866 PRELID3AQ96N28 172 aa10.09□□□□□ -0.79
SPG11-201ENST00000261866 A0A0A6YYD4 124 aa10.09□□□□□ -0.79
SPG11-201ENST00000261866 LINC00862A6NCI5 91 aa10.09□□□□□ -0.79
SPG11-201ENST00000261866 PHLDA1Q8WV24 401 aaPredicted RBP10.09□□□□□ -0.79
SPG11-201ENST00000261866 ALPK2Q86TB3 2170 aa10.09□□□□□ -0.79
SPG11-201ENST00000261866 LYPD2Q6UXB3 125 aa10.09□□□□□ -0.79
SPG11-201ENST00000261866 SSBP4Q9BWG4 385 aaPredicted RBP10.09□□□□□ -0.79
SPG11-201ENST00000261866 BPESC1Q9GZL8 116 aa10.09□□□□□ -0.79
SPG11-201ENST00000261866 RNASE7Q9H1E1 156 aaKnown RBP10.09□□□□□ -0.79
SPG11-201ENST00000261866 DOCK4Q8N1I0 1966 aa10.09□□□□□ -0.79
SPG11-201ENST00000261866 SMIM13P0DJ93 91 aa10.09□□□□□ -0.79
SPG11-201ENST00000261866 EFNA4P52798 201 aa10.09□□□□□ -0.79
SPG11-201ENST00000261866 TMEM30BQ3MIR4 351 aa10.09□□□□□ -0.79
SPG11-201ENST00000261866 TMEM183AQ8IXX5 376 aa10.09□□□□□ -0.79
SPG11-201ENST00000261866 HLA-DQA1P01909 254 aa10.08□□□□□ -0.8
SPG11-201ENST00000261866 APOHP02749 345 aaPredicted RBP10.08□□□□□ -0.8
SPG11-201ENST00000261866 LINC00614P0C842 121 aa10.08□□□□□ -0.8
SPG11-201ENST00000261866 IGKV1D-8A0A087WSZ0 117 aa10.08□□□□□ -0.8
SPG11-201ENST00000261866 TRAV2A0A0B4J234 112 aa10.08□□□□□ -0.8
SPG11-201ENST00000261866 TRAV41A0A0B4J266 112 aa10.08□□□□□ -0.8
SPG11-201ENST00000261866 C1orf122Q6ZSJ8 110 aa10.08□□□□□ -0.8
SPG11-201ENST00000261866 COL25A1Q9BXS0 654 aaPredicted RBP10.08□□□□□ -0.8
SPG11-201ENST00000261866 FOLR2P14207 255 aa10.08□□□□□ -0.8
SPG11-201ENST00000261866 CDC42EP3Q9UKI2 254 aa10.08□□□□□ -0.8
SPG11-201ENST00000261866 LCNL1Q6ZST4 164 aa10.08□□□□□ -0.8
SPG11-201ENST00000261866 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.08□□□□□ -0.8
SPG11-201ENST00000261866 ZNF625Q96I27 306 aaPredicted RBP10.08□□□□□ -0.8
SPG11-201ENST00000261866 UBE2E2Q96LR5 201 aa10.08□□□□□ -0.8
SPG11-201ENST00000261866 RALGAPA2Q2PPJ7 1873 aa10.08□□□□□ -0.8
SPG11-201ENST00000261866 CADP27708 2225 aa10.07□□□□□ -0.8
SPG11-201ENST00000261866 GREB1LQ9C091 1923 aaPredicted RBP10.07□□□□□ -0.8
SPG11-201ENST00000261866 SLC25A20O43772 301 aa10.07□□□□□ -0.8
SPG11-201ENST00000261866 ZNRD1Q9P1U0 126 aa10.07□□□□□ -0.8
SPG11-201ENST00000261866 F8VVB4 439 aa10.07□□□□□ -0.8
SPG11-201ENST00000261866 F8VWA3 439 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms