RNA–Protein interactions for RNA: ENST00000261799.8

PDGFRB-201, Transcript of platelet derived growth factor receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRB, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-201ENST00000261799 NPDC1Q9NQX5 325 aaPredicted RBP11.21□□□□□ -0.62
PDGFRB-201ENST00000261799 TFF3Q07654 80 aa11.2□□□□□ -0.62
PDGFRB-201ENST00000261799 C5orf64Q2M2E5 130 aa11.2□□□□□ -0.62
PDGFRB-201ENST00000261799 CD200R1LQ6Q8B3 271 aa11.2□□□□□ -0.62
PDGFRB-201ENST00000261799 BEND2Q8NDZ0 799 aa11.2□□□□□ -0.62
PDGFRB-201ENST00000261799 PLA2G10O15496 165 aa11.2□□□□□ -0.62
PDGFRB-201ENST00000261799 CLPSP04118 112 aa11.2□□□□□ -0.62
PDGFRB-201ENST00000261799 UCP1P25874 307 aa11.2□□□□□ -0.62
PDGFRB-201ENST00000261799 TMEM170BQ5T4T1 132 aa11.2□□□□□ -0.62
PDGFRB-201ENST00000261799 ZNF329Q86UD4 541 aa11.2□□□□□ -0.62
PDGFRB-201ENST00000261799 LCTP09848 1927 aa11.2□□□□□ -0.62
PDGFRB-201ENST00000261799 C7orf77A4D0Y5 90 aa11.2□□□□□ -0.62
PDGFRB-201ENST00000261799 LY6HO94772 140 aa11.2□□□□□ -0.62
PDGFRB-201ENST00000261799 NAT1P18440 290 aa11.2□□□□□ -0.62
PDGFRB-201ENST00000261799 CD177Q8N6Q3 437 aa11.2□□□□□ -0.62
PDGFRB-201ENST00000261799 OR1P1Q8NH06 330 aa11.2□□□□□ -0.62
PDGFRB-201ENST00000261799 SOX21Q9Y651 276 aaPredicted RBP11.2□□□□□ -0.62
PDGFRB-201ENST00000261799 C7orf71A4D174 169 aa11.2□□□□□ -0.62
PDGFRB-201ENST00000261799 AGAP20933 346 aa11.2□□□□□ -0.62
PDGFRB-201ENST00000261799 TMEM144Q7Z5S9 345 aa11.2□□□□□ -0.62
PDGFRB-201ENST00000261799 UNC13CQ8NB66 2214 aa11.19□□□□□ -0.62
PDGFRB-201ENST00000261799 TRBV9A0A0B4J1U6 114 aa11.19□□□□□ -0.62
PDGFRB-201ENST00000261799 DNAL4O96015 105 aa11.19□□□□□ -0.62
PDGFRB-201ENST00000261799 CGAP01215 116 aa11.19□□□□□ -0.62
PDGFRB-201ENST00000261799 EGR1P18146 543 aa11.19□□□□□ -0.62
PDGFRB-201ENST00000261799 PRTN3P24158 256 aa11.19□□□□□ -0.62
PDGFRB-201ENST00000261799 WFDC12Q8WWY7 111 aa11.19□□□□□ -0.62
PDGFRB-201ENST00000261799 C2orf68Q2NKX9 166 aa11.19□□□□□ -0.62
PDGFRB-201ENST00000261799 SCGB3A1Q96QR1 104 aa11.19□□□□□ -0.62
PDGFRB-201ENST00000261799 CEACAM8P31997 349 aaPredicted RBP11.19□□□□□ -0.62
PDGFRB-201ENST00000261799 GAS1P54826 345 aa11.19□□□□□ -0.62
PDGFRB-201ENST00000261799 HIST1H4GQ99525 98 aa11.19□□□□□ -0.62
PDGFRB-201ENST00000261799 MRPL18Q9H0U6 180 aaKnown RBP11.19□□□□□ -0.62
PDGFRB-201ENST00000261799 TRGV1A0A0A0MS02 117 aa11.19□□□□□ -0.62
PDGFRB-201ENST00000261799 NUDT11Q96G61 164 aa11.19□□□□□ -0.62
PDGFRB-201ENST00000261799 NXT2Q9NPJ8 142 aaKnown RBP11.19□□□□□ -0.62
PDGFRB-201ENST00000261799 GRIFINA4D1Z8 144 aa11.18□□□□□ -0.62
PDGFRB-201ENST00000261799 TBX6O95947 436 aaPredicted RBP11.18□□□□□ -0.62
PDGFRB-201ENST00000261799 TRAV8-6A0A0B4J262 113 aa11.18□□□□□ -0.62
PDGFRB-201ENST00000261799 LY6G6EA0A0G2JKS1 128 aa11.18□□□□□ -0.62
PDGFRB-201ENST00000261799 SLC25A20O43772 301 aa11.18□□□□□ -0.62
PDGFRB-201ENST00000261799 EFNA2O43921 213 aa11.18□□□□□ -0.62
PDGFRB-201ENST00000261799 DUTP33316 252 aaKnown RBP11.18□□□□□ -0.62
PDGFRB-201ENST00000261799 FBLN7Q53RD9 439 aa11.18□□□□□ -0.62
PDGFRB-201ENST00000261799 RPP21Q9H633 154 aaKnown RBP11.18□□□□□ -0.62
PDGFRB-201ENST00000261799 U3KQA8 63 aa11.18□□□□□ -0.62
PDGFRB-201ENST00000261799 LINC00862A6NCI5 91 aa11.18□□□□□ -0.62
PDGFRB-201ENST00000261799 LEPROTL1O95214 131 aa11.18□□□□□ -0.62
PDGFRB-201ENST00000261799 CXorf65A6NEN9 183 aa11.18□□□□□ -0.62
PDGFRB-201ENST00000261799 IGFBP3P17936 291 aaPredicted RBP11.18□□□□□ -0.62
PDGFRB-201ENST00000261799 LYPD2Q6UXB3 125 aa11.18□□□□□ -0.62
PDGFRB-201ENST00000261799 IL17RELQ6ZVW7 336 aa11.18□□□□□ -0.62
PDGFRB-201ENST00000261799 MIR17HGQ75NE6 70 aa11.18□□□□□ -0.62
PDGFRB-201ENST00000261799 IFI27P40305 119 aaPredicted RBP11.18□□□□□ -0.62
PDGFRB-201ENST00000261799 COTL1Q14019 142 aa11.18□□□□□ -0.62
PDGFRB-201ENST00000261799 SFRP2Q96HF1 295 aa11.18□□□□□ -0.62
PDGFRB-201ENST00000261799 DIRC3C9JPN6 131 aa11.17□□□□□ -0.62
PDGFRB-201ENST00000261799 HOXA5P20719 270 aa11.17□□□□□ -0.62
PDGFRB-201ENST00000261799 TMEM190Q8WZ59 177 aa11.17□□□□□ -0.62
PDGFRB-201ENST00000261799 SCGB1A1P11684 91 aa11.17□□□□□ -0.62
PDGFRB-201ENST00000261799 C9orf62Q8N4C0 152 aa11.17□□□□□ -0.62
PDGFRB-201ENST00000261799 FBLIM1Q8WUP2 373 aa11.17□□□□□ -0.62
PDGFRB-201ENST00000261799 PPP1R3EQ9H7J1 279 aa11.17□□□□□ -0.62
PDGFRB-201ENST00000261799 COL4A6Q14031 1691 aa11.16□□□□□ -0.62
PDGFRB-201ENST00000261799 AMBPP02760 352 aa11.16□□□□□ -0.62
PDGFRB-201ENST00000261799 ZNF362Q5T0B9 420 aaPredicted RBP11.16□□□□□ -0.62
PDGFRB-201ENST00000261799 CD8AP01732 235 aa11.16□□□□□ -0.62
PDGFRB-201ENST00000261799 ZNF324BQ6AW86 544 aaPredicted RBP11.16□□□□□ -0.62
PDGFRB-201ENST00000261799 ISOC2Q96AB3 205 aa11.16□□□□□ -0.62
PDGFRB-201ENST00000261799 C1orf122Q6ZSJ8 110 aa11.16□□□□□ -0.62
PDGFRB-201ENST00000261799 SNRPEP62304 92 aaKnown RBP11.16□□□□□ -0.62
PDGFRB-201ENST00000261799 SELENOKQ9Y6D0 94 aa11.16□□□□□ -0.62
PDGFRB-201ENST00000261799 DAD1P61803 113 aa11.16□□□□□ -0.62
PDGFRB-201ENST00000261799 EFNB3Q15768 340 aa11.16□□□□□ -0.62
PDGFRB-201ENST00000261799 IGF2-ASQ6U949 168 aa11.16□□□□□ -0.62
PDGFRB-201ENST00000261799 HAPLN4Q86UW8 402 aa11.16□□□□□ -0.62
PDGFRB-201ENST00000261799 TET1Q8NFU7 2136 aa11.16□□□□□ -0.62
PDGFRB-201ENST00000261799 ATP5LO75964 103 aa11.15□□□□□ -0.62
PDGFRB-201ENST00000261799 SELLP14151 372 aa11.15□□□□□ -0.62
PDGFRB-201ENST00000261799 SYNJ2BPP57105 145 aa11.15□□□□□ -0.62
PDGFRB-201ENST00000261799 FXYD7P58549 80 aa11.15□□□□□ -0.62
PDGFRB-201ENST00000261799 H0YJW9 148 aa11.15□□□□□ -0.62
PDGFRB-201ENST00000261799 C9orf139Q6ZV77 190 aa11.15□□□□□ -0.62
PDGFRB-201ENST00000261799 ARL6IP6Q8N6S5 226 aa11.15□□□□□ -0.62
PDGFRB-201ENST00000261799 CFHR2P36980 270 aa11.15□□□□□ -0.62
PDGFRB-201ENST00000261799 TRAV9-2A0A087WT02 112 aa11.15□□□□□ -0.63
PDGFRB-201ENST00000261799 GATA2P23769 480 aaPredicted RBP11.15□□□□□ -0.63
PDGFRB-201ENST00000261799 UBE2E2Q96LR5 201 aa11.15□□□□□ -0.63
PDGFRB-201ENST00000261799 RAMP3O60896 148 aa11.14□□□□□ -0.63
PDGFRB-201ENST00000261799 RPL36AP83881 106 aaKnown RBP11.14□□□□□ -0.63
PDGFRB-201ENST00000261799 RPL36ALQ969Q0 106 aaKnown RBP11.14□□□□□ -0.63
PDGFRB-201ENST00000261799 DAZ1Q9NQZ3 744 aaKnown RBP11.14□□□□□ -0.63
PDGFRB-201ENST00000261799 PGPEP1Q9NXJ5 209 aa11.14□□□□□ -0.63
PDGFRB-201ENST00000261799 A0A1B0GUT8 65 aa11.14□□□□□ -0.63
PDGFRB-201ENST00000261799 LYPD3O95274 346 aa11.14□□□□□ -0.63
PDGFRB-201ENST00000261799 VCX2Q9H322 139 aa11.14□□□□□ -0.63
PDGFRB-201ENST00000261799 TMEM50AO95807 157 aa11.14□□□□□ -0.63
PDGFRB-201ENST00000261799 PKIAP61925 76 aa11.14□□□□□ -0.63
PDGFRB-201ENST00000261799 VN1R17PQ8TDU5 208 aa11.14□□□□□ -0.63
PDGFRB-201ENST00000261799 TRAF4Q9BUZ4 470 aaPredicted RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms