RNA–Protein interactions for RNA: ENST00000261368.12

SNCAIP-202, Transcript of synuclein alpha interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCAIP, Length 3,745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-202ENST00000261368 HLA-DQA1P01909 254 aa13.21□□□□□ -0.29
SNCAIP-202ENST00000261368 DAZAP1Q96EP5 407 aaKnown RBP13.21□□□□□ -0.29
SNCAIP-202ENST00000261368 TPPP3Q9BW30 176 aa13.21□□□□□ -0.29
SNCAIP-202ENST00000261368 GNB1LQ9BYB4 327 aa13.21□□□□□ -0.29
SNCAIP-202ENST00000261368 CDC42EP3Q9UKI2 254 aa13.21□□□□□ -0.29
SNCAIP-202ENST00000261368 DPRXA6NFQ7 191 aa13.21□□□□□ -0.3
SNCAIP-202ENST00000261368 NPSP0C0P6 89 aa13.21□□□□□ -0.3
SNCAIP-202ENST00000261368 RAB4AP20338 218 aa13.21□□□□□ -0.3
SNCAIP-202ENST00000261368 CX3CL1P78423 397 aa13.21□□□□□ -0.3
SNCAIP-202ENST00000261368 PRR20EP86478 221 aa13.21□□□□□ -0.3
SNCAIP-202ENST00000261368 PRR20CP86479 221 aa13.21□□□□□ -0.3
SNCAIP-202ENST00000261368 PRR20DP86480 221 aa13.21□□□□□ -0.3
SNCAIP-202ENST00000261368 PRR20BP86481 221 aa13.21□□□□□ -0.3
SNCAIP-202ENST00000261368 PRR20AP86496 221 aa13.21□□□□□ -0.3
SNCAIP-202ENST00000261368 OR4B1Q8NGF8 309 aa13.21□□□□□ -0.3
SNCAIP-202ENST00000261368 NEU1Q99519 415 aa13.21□□□□□ -0.3
SNCAIP-202ENST00000261368 BPIFB3P59826 476 aa13.2□□□□□ -0.3
SNCAIP-202ENST00000261368 DMRTA1Q5VZB9 504 aa13.2□□□□□ -0.3
SNCAIP-202ENST00000261368 RNF2Q99496 336 aa13.2□□□□□ -0.3
SNCAIP-202ENST00000261368 TMPRSS3P57727 454 aa13.2□□□□□ -0.3
SNCAIP-202ENST00000261368 KCNS1Q96KK3 526 aa13.2□□□□□ -0.3
SNCAIP-202ENST00000261368 APC2O95996 2303 aa13.2□□□□□ -0.3
SNCAIP-202ENST00000261368 SSBP2P81877 361 aaPredicted RBP13.2□□□□□ -0.3
SNCAIP-202ENST00000261368 TMEM249Q2WGJ8 235 aa13.2□□□□□ -0.3
SNCAIP-202ENST00000261368 ZNF474Q6S9Z5 364 aaPredicted RBP13.2□□□□□ -0.3
SNCAIP-202ENST00000261368 NEUROG1Q92886 237 aa13.2□□□□□ -0.3
SNCAIP-202ENST00000261368 SFXN3Q9BWM7 321 aa13.2□□□□□ -0.3
SNCAIP-202ENST00000261368 RNF114Q9Y508 228 aa13.2□□□□□ -0.3
SNCAIP-202ENST00000261368 IGLV1-44P01699 117 aa13.19□□□□□ -0.3
SNCAIP-202ENST00000261368 IGHV1-46P01743 117 aa13.19□□□□□ -0.3
SNCAIP-202ENST00000261368 SUB1P53999 127 aaKnown RBP eCLIP13.19□□□□□ -0.3
SNCAIP-202ENST00000261368 SELENOTP62341 195 aa13.19□□□□□ -0.3
SNCAIP-202ENST00000261368 CD69Q07108 199 aa13.19□□□□□ -0.3
SNCAIP-202ENST00000261368 SLC25A33Q9BSK2 321 aa13.19□□□□□ -0.3
SNCAIP-202ENST00000261368 OSTCQ9NRP0 149 aa13.19□□□□□ -0.3
SNCAIP-202ENST00000261368 A0A1W2PS18 150 aa13.19□□□□□ -0.3
SNCAIP-202ENST00000261368 PGPA6NDG6 321 aa13.19□□□□□ -0.3
SNCAIP-202ENST00000261368 ZNF324O75467 553 aaPredicted RBP13.19□□□□□ -0.3
SNCAIP-202ENST00000261368 COL5A1-AS1Q5SY13 56 aa13.19□□□□□ -0.3
SNCAIP-202ENST00000261368 LEMD1Q68G75 181 aa13.19□□□□□ -0.3
SNCAIP-202ENST00000261368 PDPNQ86YL7 162 aa13.19□□□□□ -0.3
SNCAIP-202ENST00000261368 C22orf15Q8WYQ4 148 aa13.19□□□□□ -0.3
SNCAIP-202ENST00000261368 DDB2Q92466 427 aa13.19□□□□□ -0.3
SNCAIP-202ENST00000261368 TRBV9A0A0B4J1U6 114 aa13.18□□□□□ -0.3
SNCAIP-202ENST00000261368 DLL1O00548 723 aa13.18□□□□□ -0.3
SNCAIP-202ENST00000261368 LINC00310P59036 64 aa13.18□□□□□ -0.3
SNCAIP-202ENST00000261368 TMEM136Q6ZRR5 245 aa13.18□□□□□ -0.3
SNCAIP-202ENST00000261368 GAL3ST2Q9H3Q3 398 aa13.18□□□□□ -0.3
SNCAIP-202ENST00000261368 DYNLRB1Q9NP97 96 aa13.18□□□□□ -0.3
SNCAIP-202ENST00000261368 OTOGLQ3ZCN5 2332 aa13.18□□□□□ -0.3
SNCAIP-202ENST00000261368 TRAV9-1A0A075B6T8 112 aa13.18□□□□□ -0.3
SNCAIP-202ENST00000261368 BMPR1BO00238 502 aa13.18□□□□□ -0.3
SNCAIP-202ENST00000261368 SIAH2O43255 324 aa13.18□□□□□ -0.3
SNCAIP-202ENST00000261368 C3orf79P0CE67 100 aa13.18□□□□□ -0.3
SNCAIP-202ENST00000261368 PLGLAQ15195 96 aa13.18□□□□□ -0.3
SNCAIP-202ENST00000261368 ST6GALNAC6Q969X2 333 aa13.18□□□□□ -0.3
SNCAIP-202ENST00000261368 C11orf52Q96A22 123 aa13.18□□□□□ -0.3
SNCAIP-202ENST00000261368 ARL2-SNX15V9GYD0 113 aa13.18□□□□□ -0.3
SNCAIP-202ENST00000261368 MALRD1Q5VYJ5 2156 aa13.18□□□□□ -0.3
SNCAIP-202ENST00000261368 RNASE2P10153 161 aaKnown RBP13.18□□□□□ -0.3
SNCAIP-202ENST00000261368 TIMM23BQ5SRD1 257 aa13.18□□□□□ -0.3
SNCAIP-202ENST00000261368 CSN3P07498 182 aa13.17□□□□□ -0.3
SNCAIP-202ENST00000261368 FTH1P19P0C7X4 201 aa13.17□□□□□ -0.3
SNCAIP-202ENST00000261368 CD24P25063 80 aa13.17□□□□□ -0.3
SNCAIP-202ENST00000261368 PMCHL1Q16048 86 aa13.17□□□□□ -0.3
SNCAIP-202ENST00000261368 TCF24Q7RTU0 167 aa13.17□□□□□ -0.3
SNCAIP-202ENST00000261368 LINC00305Q7Z4B0 112 aa13.17□□□□□ -0.3
SNCAIP-202ENST00000261368 GAFA1Q96PS6 74 aa13.17□□□□□ -0.3
SNCAIP-202ENST00000261368 RPUSD1Q9UJJ7 312 aaKnown RBP13.17□□□□□ -0.3
SNCAIP-202ENST00000261368 AKAP6Q13023 2319 aa13.17□□□□□ -0.3
SNCAIP-202ENST00000261368 ISLRO14498 428 aa13.17□□□□□ -0.3
SNCAIP-202ENST00000261368 SLAQ13239 276 aa13.17□□□□□ -0.3
SNCAIP-202ENST00000261368 MAJINQ3KP22 176 aa13.17□□□□□ -0.3
SNCAIP-202ENST00000261368 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.17□□□□□ -0.3
SNCAIP-202ENST00000261368 LPAR2Q9HBW0 351 aa13.17□□□□□ -0.3
SNCAIP-202ENST00000261368 DLEU1O43261 78 aa13.17□□□□□ -0.3
SNCAIP-202ENST00000261368 DIAPH2-AS1Q14236 149 aa13.17□□□□□ -0.3
SNCAIP-202ENST00000261368 TNXAQ16473 311 aa13.17□□□□□ -0.3
SNCAIP-202ENST00000261368 TEX43Q6ZNM6 134 aa13.17□□□□□ -0.3
SNCAIP-202ENST00000261368 ZNF714Q96N38 554 aa13.17□□□□□ -0.3
SNCAIP-202ENST00000261368 HIGD1CA8MV81 97 aa13.16□□□□□ -0.3
SNCAIP-202ENST00000261368 M0QZ24 198 aa13.16□□□□□ -0.3
SNCAIP-202ENST00000261368 PEX7O00628 323 aa13.16□□□□□ -0.3
SNCAIP-202ENST00000261368 PPOXP50336 477 aa13.16□□□□□ -0.3
SNCAIP-202ENST00000261368 DLX1P56177 255 aa13.16□□□□□ -0.3
SNCAIP-202ENST00000261368 C19orf35Q6ZS72 473 aa13.16□□□□□ -0.3
SNCAIP-202ENST00000261368 ERASQ7Z444 233 aa13.16□□□□□ -0.3
SNCAIP-202ENST00000261368 KLHDC1Q8N7A1 406 aa13.16□□□□□ -0.3
SNCAIP-202ENST00000261368 OR1L4Q8NGR5 311 aa13.16□□□□□ -0.3
SNCAIP-202ENST00000261368 ZNF503Q96F45 646 aa13.16□□□□□ -0.3
SNCAIP-202ENST00000261368 C20orf144Q9BQM9 153 aa13.16□□□□□ -0.3
SNCAIP-202ENST00000261368 ZNF430Q9H8G1 570 aaPredicted RBP13.16□□□□□ -0.3
SNCAIP-202ENST00000261368 DKK4Q9UBT3 224 aa13.16□□□□□ -0.3
SNCAIP-202ENST00000261368 UQCR10Q9UDW1 63 aa13.16□□□□□ -0.3
SNCAIP-202ENST00000261368 TNRC18O15417 2968 aaPredicted RBP13.16□□□□□ -0.3
SNCAIP-202ENST00000261368 TNFRSF1AP19438 455 aa13.16□□□□□ -0.3
SNCAIP-202ENST00000261368 Q0VG73 95 aa13.16□□□□□ -0.3
SNCAIP-202ENST00000261368 ZFHX4Q86UP3 3567 aa13.16□□□□□ -0.3
SNCAIP-202ENST00000261368 A0A1W2PRE2 83 aa13.16□□□□□ -0.3
SNCAIP-202ENST00000261368 CORTO00230 105 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms