RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 IGHV3-48P01763 117 aa12.28□□□□□ -0.44
CCDC90B-201ENST00000260054 ARL16Q0P5N6 197 aa12.28□□□□□ -0.44
CCDC90B-201ENST00000260054 C15orf32Q32M92 178 aa12.28□□□□□ -0.44
CCDC90B-201ENST00000260054 FAM223AQ8IWN6 122 aa12.28□□□□□ -0.44
CCDC90B-201ENST00000260054 TMEM158Q8WZ71 300 aa12.28□□□□□ -0.44
CCDC90B-201ENST00000260054 RPL12P30050 165 aaKnown RBP12.27□□□□□ -0.45
CCDC90B-201ENST00000260054 OPRK1P41145 380 aa12.27□□□□□ -0.45
CCDC90B-201ENST00000260054 EWSR1Q01844 656 aaKnown RBP eCLIP12.27□□□□□ -0.45
CCDC90B-201ENST00000260054 ZNF546Q86UE3 836 aa12.27□□□□□ -0.45
CCDC90B-201ENST00000260054 SCARB1Q8WTV0 552 aa12.27□□□□□ -0.45
CCDC90B-201ENST00000260054 SULT1A1P50225 295 aa12.26□□□□□ -0.45
CCDC90B-201ENST00000260054 NHLH2Q02577 135 aa12.26□□□□□ -0.45
CCDC90B-201ENST00000260054 CD69Q07108 199 aa12.26□□□□□ -0.45
CCDC90B-201ENST00000260054 EXOSC2Q13868 293 aaKnown RBP12.26□□□□□ -0.45
CCDC90B-201ENST00000260054 TMEM217Q8N7C4 229 aa12.26□□□□□ -0.45
CCDC90B-201ENST00000260054 ZNF491Q8N8L2 437 aa12.26□□□□□ -0.45
CCDC90B-201ENST00000260054 USMG5Q96IX5 58 aa12.26□□□□□ -0.45
CCDC90B-201ENST00000260054 SLC25A31Q9H0C2 315 aa12.26□□□□□ -0.45
CCDC90B-201ENST00000260054 UBQLN2Q9UHD9 624 aa12.26□□□□□ -0.45
CCDC90B-201ENST00000260054 TNFSF18Q9UNG2 199 aa12.26□□□□□ -0.45
CCDC90B-201ENST00000260054 TENM1Q9UKZ4 2725 aa12.26□□□□□ -0.45
CCDC90B-201ENST00000260054 RNF222A6NCQ9 220 aa12.26□□□□□ -0.45
CCDC90B-201ENST00000260054 IGHV3-11P01762 117 aa12.26□□□□□ -0.45
CCDC90B-201ENST00000260054 IGHV3-23P01764 117 aa12.26□□□□□ -0.45
CCDC90B-201ENST00000260054 C4BPBP20851 252 aa12.26□□□□□ -0.45
CCDC90B-201ENST00000260054 ATP5G2Q06055 141 aa12.26□□□□□ -0.45
CCDC90B-201ENST00000260054 STX12Q86Y82 276 aa12.26□□□□□ -0.45
CCDC90B-201ENST00000260054 OR10P1Q8NGE3 313 aa12.26□□□□□ -0.45
CCDC90B-201ENST00000260054 BSCL2Q96G97 398 aaPredicted RBP12.26□□□□□ -0.45
CCDC90B-201ENST00000260054 CITED2Q99967 270 aaPredicted RBP12.26□□□□□ -0.45
CCDC90B-201ENST00000260054 MRPL36Q9P0J6 103 aaKnown RBP12.26□□□□□ -0.45
CCDC90B-201ENST00000260054 A0A0G2JLM5 398 aa12.25□□□□□ -0.45
CCDC90B-201ENST00000260054 RPS10-NUDT3A0A1W2PQS6 291 aa12.25□□□□□ -0.45
CCDC90B-201ENST00000260054 ARPC5O15511 151 aa12.25□□□□□ -0.45
CCDC90B-201ENST00000260054 C18orf65Q6ZTR6 163 aa12.25□□□□□ -0.45
CCDC90B-201ENST00000260054 ACOT7LQ6ZUV0 252 aa12.25□□□□□ -0.45
CCDC90B-201ENST00000260054 SLC16A13Q7RTY0 426 aa12.25□□□□□ -0.45
CCDC90B-201ENST00000260054 SLC51BQ86UW2 128 aa12.25□□□□□ -0.45
CCDC90B-201ENST00000260054 VN1R17PQ8TDU5 208 aa12.25□□□□□ -0.45
CCDC90B-201ENST00000260054 CXorf58Q96LI9 332 aa12.25□□□□□ -0.45
CCDC90B-201ENST00000260054 UBE2E2Q96LR5 201 aa12.25□□□□□ -0.45
CCDC90B-201ENST00000260054 AQP10Q96PS8 301 aa12.25□□□□□ -0.45
CCDC90B-201ENST00000260054 GNB4Q9HAV0 340 aa12.25□□□□□ -0.45
CCDC90B-201ENST00000260054 TCRBV4S1A1TA0A5B7 111 aa12.24□□□□□ -0.45
CCDC90B-201ENST00000260054 BAXQ07812 192 aa12.24□□□□□ -0.45
CCDC90B-201ENST00000260054 KHDC1LQ5JSQ8 128 aa12.24□□□□□ -0.45
CCDC90B-201ENST00000260054 COMMD7Q86VX2 200 aa12.24□□□□□ -0.45
CCDC90B-201ENST00000260054 ZNF502Q8TBZ5 544 aa12.24□□□□□ -0.45
CCDC90B-201ENST00000260054 CCDC140Q96MF4 163 aa12.24□□□□□ -0.45
CCDC90B-201ENST00000260054 OR5B12Q96R08 314 aa12.24□□□□□ -0.45
CCDC90B-201ENST00000260054 C21orf62Q9NYP8 219 aa12.24□□□□□ -0.45
CCDC90B-201ENST00000260054 F8W735 103 aaPredicted RBP12.23□□□□□ -0.45
CCDC90B-201ENST00000260054 I3L521 148 aa12.23□□□□□ -0.45
CCDC90B-201ENST00000260054 GPX4P36969 197 aaPredicted RBP12.23□□□□□ -0.45
CCDC90B-201ENST00000260054 CDX1P47902 265 aaPredicted RBP12.23□□□□□ -0.45
CCDC90B-201ENST00000260054 RAB14P61106 215 aa12.23□□□□□ -0.45
CCDC90B-201ENST00000260054 SLC38A11Q08AI6 406 aa12.23□□□□□ -0.45
CCDC90B-201ENST00000260054 GAMTQ14353 236 aa12.23□□□□□ -0.45
CCDC90B-201ENST00000260054 LGALSLQ3ZCW2 172 aaPredicted RBP12.23□□□□□ -0.45
CCDC90B-201ENST00000260054 ETFRF1Q6IPR1 90 aa12.23□□□□□ -0.45
CCDC90B-201ENST00000260054 INO80EQ8NBZ0 244 aaPredicted RBP12.23□□□□□ -0.45
CCDC90B-201ENST00000260054 CACNG8Q8WXS5 425 aa12.23□□□□□ -0.45
CCDC90B-201ENST00000260054 EEF1AKMT3Q96AZ1 226 aa12.23□□□□□ -0.45
CCDC90B-201ENST00000260054 ZC4H2Q9NQZ6 224 aa12.23□□□□□ -0.45
CCDC90B-201ENST00000260054 COL6A5A8TX70 2615 aa12.23□□□□□ -0.45
CCDC90B-201ENST00000260054 HMSDA8MTL9 139 aa12.22□□□□□ -0.45
CCDC90B-201ENST00000260054 RIPPLY3P57055 190 aa12.22□□□□□ -0.45
CCDC90B-201ENST00000260054 DLK1P80370 383 aa12.22□□□□□ -0.45
CCDC90B-201ENST00000260054 ZNF343Q6P1L6 599 aa12.22□□□□□ -0.45
CCDC90B-201ENST00000260054 ACSM6Q6P461 480 aa12.22□□□□□ -0.45
CCDC90B-201ENST00000260054 OR5C1Q8NGR4 320 aa12.22□□□□□ -0.45
CCDC90B-201ENST00000260054 MFFQ9GZY8 342 aa12.22□□□□□ -0.45
CCDC90B-201ENST00000260054 TSSC4Q9Y5U2 329 aaPredicted RBP12.22□□□□□ -0.45
CCDC90B-201ENST00000260054 TRBV7-1A0A0A6YYK4 115 aa12.22□□□□□ -0.45
CCDC90B-201ENST00000260054 A0A1W2PRX2 142 aa12.22□□□□□ -0.45
CCDC90B-201ENST00000260054 SCAF4O95104 1147 aaKnown RBP12.22□□□□□ -0.45
CCDC90B-201ENST00000260054 S100A11P31949 105 aa12.22□□□□□ -0.45
CCDC90B-201ENST00000260054 NUP62P37198 522 aaPredicted RBP12.22□□□□□ -0.45
CCDC90B-201ENST00000260054 RND2P52198 227 aa12.22□□□□□ -0.45
CCDC90B-201ENST00000260054 HBG1P69891 147 aa12.22□□□□□ -0.45
CCDC90B-201ENST00000260054 HBG2P69892 147 aa12.22□□□□□ -0.45
CCDC90B-201ENST00000260054 UBAC2Q8NBM4 344 aa12.22□□□□□ -0.45
CCDC90B-201ENST00000260054 TMEM116Q8NCL8 245 aa12.22□□□□□ -0.45
CCDC90B-201ENST00000260054 ACY3Q96HD9 319 aa12.22□□□□□ -0.45
CCDC90B-201ENST00000260054 CITED1Q99966 193 aa12.22□□□□□ -0.45
CCDC90B-201ENST00000260054 SMIM3Q9BZL3 60 aa12.22□□□□□ -0.45
CCDC90B-201ENST00000260054 ADARB2-AS1A8MUL3 147 aa12.21□□□□□ -0.45
CCDC90B-201ENST00000260054 TRBV12-3P01733 135 aa12.21□□□□□ -0.45
CCDC90B-201ENST00000260054 LGALS1P09382 135 aaKnown RBP12.21□□□□□ -0.45
CCDC90B-201ENST00000260054 MFAP4P55083 255 aa12.21□□□□□ -0.45
CCDC90B-201ENST00000260054 CLINT1Q14677 625 aa12.21□□□□□ -0.45
CCDC90B-201ENST00000260054 CLEC19AQ6UXS0 136 aa12.21□□□□□ -0.45
CCDC90B-201ENST00000260054 LILRB2Q8N423 598 aa12.21□□□□□ -0.45
CCDC90B-201ENST00000260054 KLHL30-AS1Q8NEE0 82 aa12.21□□□□□ -0.45
CCDC90B-201ENST00000260054 OR1S2Q8NGQ3 325 aa12.21□□□□□ -0.45
CCDC90B-201ENST00000260054 OR4X1Q8NH49 305 aa12.21□□□□□ -0.45
CCDC90B-201ENST00000260054 C4orf3Q8WVX3 66 aa12.21□□□□□ -0.45
CCDC90B-201ENST00000260054 NPIPB3Q92617 1050 aa12.21□□□□□ -0.45
CCDC90B-201ENST00000260054 SLC35E1Q96K37 410 aa12.21□□□□□ -0.45
CCDC90B-201ENST00000260054 GGACTQ9BVM4 153 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms