RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 MGST2Q99735 147 aa13.8□□□□□ -0.2
SRSF1-201ENST00000258962 MEGF9Q9H1U4 602 aa13.8□□□□□ -0.2
SRSF1-201ENST00000258962 KCNIP2Q9NS61 270 aa13.8□□□□□ -0.2
SRSF1-201ENST00000258962 RPRMQ9NS64 109 aa13.8□□□□□ -0.2
SRSF1-201ENST00000258962 SUB1P53999 127 aaKnown RBP eCLIP13.8□□□□□ -0.23e-12■■■□□ 15.2
SRSF1-201ENST00000258962 ELLP55199 621 aaPredicted RBP13.8□□□□□ -0.2
SRSF1-201ENST00000258962 FXYD3Q14802 87 aa13.8□□□□□ -0.2
SRSF1-201ENST00000258962 TMEM41BQ5BJD5 291 aa13.8□□□□□ -0.2
SRSF1-201ENST00000258962 PIFOQ8TCI5 191 aa13.8□□□□□ -0.2
SRSF1-201ENST00000258962 RNASEH2CQ8TDP1 164 aaKnown RBP13.8□□□□□ -0.2
SRSF1-201ENST00000258962 SSMEM1Q8WWF3 244 aa13.8□□□□□ -0.2
SRSF1-201ENST00000258962 SRSF8Q9BRL6 282 aaKnown RBP13.8□□□□□ -0.2
SRSF1-201ENST00000258962 NPVFQ9HCQ7 196 aa13.8□□□□□ -0.2
SRSF1-201ENST00000258962 TRAV1-1A0A0B4J248 108 aa13.79□□□□□ -0.2
SRSF1-201ENST00000258962 CLDN34H7C241 214 aa13.79□□□□□ -0.2
SRSF1-201ENST00000258962 HOXA3O43365 443 aaPredicted RBP13.79□□□□□ -0.2
SRSF1-201ENST00000258962 CNIH1O95406 144 aa13.79□□□□□ -0.2
SRSF1-201ENST00000258962 NDPQ00604 133 aa13.79□□□□□ -0.2
SRSF1-201ENST00000258962 RAB31Q13636 194 aa13.79□□□□□ -0.2
SRSF1-201ENST00000258962 GAMTQ14353 236 aa13.79□□□□□ -0.2
SRSF1-201ENST00000258962 SLC16A13Q7RTY0 426 aa13.79□□□□□ -0.2
SRSF1-201ENST00000258962 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.79□□□□□ -0.2
SRSF1-201ENST00000258962 GGTLC1Q9BX51 225 aa13.79□□□□□ -0.2
SRSF1-201ENST00000258962 FNDC4Q9H6D8 234 aaPredicted RBP13.79□□□□□ -0.2
SRSF1-201ENST00000258962 CX3CL1P78423 397 aa13.78□□□□□ -0.2
SRSF1-201ENST00000258962 AKR1C1Q04828 323 aa13.78□□□□□ -0.2
SRSF1-201ENST00000258962 ZNF726P1Q15940 193 aa13.78□□□□□ -0.2
SRSF1-201ENST00000258962 SPSB3Q6PJ21 355 aa13.78□□□□□ -0.2
SRSF1-201ENST00000258962 ZNF562Q6V9R5 426 aa13.78□□□□□ -0.2
SRSF1-201ENST00000258962 SPATA3Q8NHX4 192 aa13.78□□□□□ -0.2
SRSF1-201ENST00000258962 FAM103A1Q9BTL3 118 aaKnown RBP13.78□□□□□ -0.2
SRSF1-201ENST00000258962 TNFRSF19Q9NS68 423 aa13.78□□□□□ -0.2
SRSF1-201ENST00000258962 C1RLQ9NZP8 487 aa13.78□□□□□ -0.2
SRSF1-201ENST00000258962 DMRT1Q9Y5R6 373 aa13.78□□□□□ -0.2
SRSF1-201ENST00000258962 F11RQ9Y624 299 aaKnown RBP13.78□□□□□ -0.2
SRSF1-201ENST00000258962 TSPAN9O75954 239 aa13.77□□□□□ -0.21
SRSF1-201ENST00000258962 CD5P06127 495 aa13.77□□□□□ -0.21
SRSF1-201ENST00000258962 RNASE1P07998 156 aaKnown RBP13.77□□□□□ -0.21
SRSF1-201ENST00000258962 GPX4P36969 197 aaPredicted RBP13.77□□□□□ -0.21
SRSF1-201ENST00000258962 GUK1Q16774 197 aa13.77□□□□□ -0.21
SRSF1-201ENST00000258962 FFAR4Q5NUL3 377 aa13.77□□□□□ -0.21
SRSF1-201ENST00000258962 SSX7Q7RTT5 188 aa13.77□□□□□ -0.21
SRSF1-201ENST00000258962 TMEM86BQ8N661 226 aa13.77□□□□□ -0.21
SRSF1-201ENST00000258962 OR1P1Q8NH06 330 aa13.77□□□□□ -0.21
SRSF1-201ENST00000258962 ABHD5Q8WTS1 349 aa13.77□□□□□ -0.21
SRSF1-201ENST00000258962 CACNG8Q8WXS5 425 aa13.77□□□□□ -0.21
SRSF1-201ENST00000258962 ARPC1AQ92747 370 aa13.77□□□□□ -0.21
SRSF1-201ENST00000258962 SEC11CQ9BY50 192 aa13.77□□□□□ -0.21
SRSF1-201ENST00000258962 EIF5A2Q9GZV4 153 aaKnown RBP13.77□□□□□ -0.21
SRSF1-201ENST00000258962 IGKV1OR2-108A0A075B7D4 117 aa13.76□□□□□ -0.21
SRSF1-201ENST00000258962 IGHV7-81A0A0B4J1V7 117 aa13.76□□□□□ -0.21
SRSF1-201ENST00000258962 F8W036 122 aa13.76□□□□□ -0.21
SRSF1-201ENST00000258962 AGPAT2O15120 278 aa13.76□□□□□ -0.21
SRSF1-201ENST00000258962 HLA-DRB1P01911 266 aa13.76□□□□□ -0.21
SRSF1-201ENST00000258962 APOC3P02656 99 aa13.76□□□□□ -0.21
SRSF1-201ENST00000258962 ASPHD1Q5U4P2 390 aa13.76□□□□□ -0.21
SRSF1-201ENST00000258962 TEPPQ6URK8 271 aa13.76□□□□□ -0.21
SRSF1-201ENST00000258962 TMEM144Q7Z5S9 345 aa13.76□□□□□ -0.21
SRSF1-201ENST00000258962 SVBPQ8N300 66 aa13.76□□□□□ -0.21
SRSF1-201ENST00000258962 SFT2D1Q8WV19 159 aa13.76□□□□□ -0.21
SRSF1-201ENST00000258962 MBD3L1Q8WWY6 194 aa13.76□□□□□ -0.21
SRSF1-201ENST00000258962 RCC1LQ96I51 464 aaKnown RBP13.76□□□□□ -0.21
SRSF1-201ENST00000258962 CTRB1P17538 263 aa13.75□□□□□ -0.21
SRSF1-201ENST00000258962 OPRK1P41145 380 aa13.75□□□□□ -0.21
SRSF1-201ENST00000258962 IER3P46695 156 aa13.75□□□□□ -0.21
SRSF1-201ENST00000258962 SRSF3P84103 164 aaKnown RBP13.75□□□□□ -0.21
SRSF1-201ENST00000258962 ACOT6Q3I5F7 207 aaPredicted RBP13.75□□□□□ -0.21
SRSF1-201ENST00000258962 CTRB2Q6GPI1 263 aa13.75□□□□□ -0.21
SRSF1-201ENST00000258962 OR2T6Q8NHC8 308 aa13.75□□□□□ -0.21
SRSF1-201ENST00000258962 MISP3Q96FF7 219 aa13.75□□□□□ -0.21
SRSF1-201ENST00000258962 MRPL36Q9P0J6 103 aaKnown RBP13.75□□□□□ -0.21
SRSF1-201ENST00000258962 A0A1B0GV50 99 aa13.74□□□□□ -0.21
SRSF1-201ENST00000258962 CYB5BO43169 146 aa13.74□□□□□ -0.21
SRSF1-201ENST00000258962 YIF1AO95070 293 aa13.74□□□□□ -0.21
SRSF1-201ENST00000258962 IGHV4-59P01825 116 aa13.74□□□□□ -0.21
SRSF1-201ENST00000258962 CRYGCP07315 174 aa13.74□□□□□ -0.21
SRSF1-201ENST00000258962 EGR2P11161 476 aaPredicted RBP13.74□□□□□ -0.21
SRSF1-201ENST00000258962 CCL20P78556 96 aa13.74□□□□□ -0.21
SRSF1-201ENST00000258962 MIC13Q5XKP0 118 aa13.74□□□□□ -0.21
SRSF1-201ENST00000258962 TMEM219Q86XT9 240 aa13.74□□□□□ -0.21
SRSF1-201ENST00000258962 RPP25LQ8N5L8 163 aaKnown RBP13.74□□□□□ -0.21
SRSF1-201ENST00000258962 SLC35E1Q96K37 410 aa13.74□□□□□ -0.21
SRSF1-201ENST00000258962 RBM14Q96PK6 669 aaKnown RBP13.74□□□□□ -0.21
SRSF1-201ENST00000258962 SSX3Q99909 188 aa13.74□□□□□ -0.21
SRSF1-201ENST00000258962 HSPB9Q9BQS6 159 aa13.74□□□□□ -0.21
SRSF1-201ENST00000258962 SCRT1Q9BWW7 348 aa13.74□□□□□ -0.21
SRSF1-201ENST00000258962 ACTR3CQ9C0K3 210 aaPredicted RBP13.74□□□□□ -0.21
SRSF1-201ENST00000258962 SLC39A9Q9NUM3 307 aa13.74□□□□□ -0.21
SRSF1-201ENST00000258962 CARHSP1Q9Y2V2 147 aaKnown RBP13.74□□□□□ -0.21
SRSF1-201ENST00000258962 PXMP4Q9Y6I8 212 aa13.74□□□□□ -0.21
SRSF1-201ENST00000258962 IFNA1P01562 189 aa13.74□□□□□ -0.21
SRSF1-201ENST00000258962 IGHV3-48P01763 117 aa13.74□□□□□ -0.21
SRSF1-201ENST00000258962 CRYBA1P05813 215 aa13.74□□□□□ -0.21
SRSF1-201ENST00000258962 DEFA5Q01523 94 aa13.74□□□□□ -0.21
SRSF1-201ENST00000258962 C10orf91Q5T1B1 145 aa13.74□□□□□ -0.21
SRSF1-201ENST00000258962 C5orf56Q8N8D9 126 aa13.74□□□□□ -0.21
SRSF1-201ENST00000258962 RASL11BQ9BPW5 248 aa13.74□□□□□ -0.21
SRSF1-201ENST00000258962 SLC25A33Q9BSK2 321 aa13.74□□□□□ -0.21
SRSF1-201ENST00000258962 WNT10AQ9GZT5 417 aa13.74□□□□□ -0.21
SRSF1-201ENST00000258962 RBFOX3A6NFN3 312 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms