RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 NBEAL2Q6ZNJ1 2754 aa7.34□□□□□ -1.24
CKAP2-201ENST00000258607 LOC105371242A0A075B767 164 aa7.33□□□□□ -1.24
CKAP2-201ENST00000258607 NPIPB11E5RHQ5 1161 aa7.33□□□□□ -1.24
CKAP2-201ENST00000258607 TGOLN2O43493 480 aa7.33□□□□□ -1.24
CKAP2-201ENST00000258607 RPL11P62913 178 aaKnown RBP7.33□□□□□ -1.24
CKAP2-201ENST00000258607 SCRT1Q9BWW7 348 aa7.33□□□□□ -1.24
CKAP2-201ENST00000258607 CLEC7AQ9BXN2 247 aa7.33□□□□□ -1.24
CKAP2-201ENST00000258607 COA4Q9NYJ1 87 aa7.33□□□□□ -1.24
CKAP2-201ENST00000258607 MDFIC2A0A1B0GVS7 189 aa7.33□□□□□ -1.24
CKAP2-201ENST00000258607 F6UZH7 168 aa7.33□□□□□ -1.24
CKAP2-201ENST00000258607 MT-CO2P00403 227 aa7.33□□□□□ -1.24
CKAP2-201ENST00000258607 CBLN1P23435 193 aa7.33□□□□□ -1.24
CKAP2-201ENST00000258607 ZFP36P26651 326 aaKnown RBP7.33□□□□□ -1.24
CKAP2-201ENST00000258607 NUBP1P53384 320 aa7.33□□□□□ -1.24
CKAP2-201ENST00000258607 HLA-DRB5Q30154 266 aa7.33□□□□□ -1.24
CKAP2-201ENST00000258607 DMRTA1Q5VZB9 504 aa7.33□□□□□ -1.24
CKAP2-201ENST00000258607 TRAT1Q6PIZ9 186 aa7.33□□□□□ -1.24
CKAP2-201ENST00000258607 P2RX4Q99571 388 aa7.33□□□□□ -1.24
CKAP2-201ENST00000258607 WDR83OSQ9Y284 106 aa7.33□□□□□ -1.24
CKAP2-201ENST00000258607 PMS2P5A8MQ11 134 aa7.33□□□□□ -1.24
CKAP2-201ENST00000258607 PPP5D1E7EU14 171 aa7.33□□□□□ -1.24
CKAP2-201ENST00000258607 MT-ND4LP03901 98 aa7.33□□□□□ -1.24
CKAP2-201ENST00000258607 VDAC2P45880 294 aaPredicted RBP7.33□□□□□ -1.24
CKAP2-201ENST00000258607 ZNF137PP52743 207 aa7.33□□□□□ -1.24
CKAP2-201ENST00000258607 RPL23P62829 140 aaKnown RBP7.33□□□□□ -1.24
CKAP2-201ENST00000258607 SERF2P84101 59 aa7.33□□□□□ -1.24
CKAP2-201ENST00000258607 Q56UQ5 140 aa7.33□□□□□ -1.24
CKAP2-201ENST00000258607 KHDC3LQ587J8 217 aa7.33□□□□□ -1.24
CKAP2-201ENST00000258607 PRNDQ9UKY0 176 aa7.33□□□□□ -1.24
CKAP2-201ENST00000258607 IGHV1-3A0A0C4DH29 117 aa7.32□□□□□ -1.24
CKAP2-201ENST00000258607 IGHV3-11P01762 117 aa7.32□□□□□ -1.24
CKAP2-201ENST00000258607 APCP25054 2843 aa7.32□□□□□ -1.24
CKAP2-201ENST00000258607 HTR1DP28221 377 aa7.32□□□□□ -1.24
CKAP2-201ENST00000258607 ELOBQ15370 118 aa7.32□□□□□ -1.24
CKAP2-201ENST00000258607 ZNF506Q5JVG8 444 aa7.32□□□□□ -1.24
CKAP2-201ENST00000258607 FAM120AOSQ5T036 256 aa7.32□□□□□ -1.24
CKAP2-201ENST00000258607 NUP37Q8NFH4 326 aa7.32□□□□□ -1.24
CKAP2-201ENST00000258607 WFDC12Q8WWY7 111 aa7.32□□□□□ -1.24
CKAP2-201ENST00000258607 RYDENQ9NUL5 291 aaKnown RBP7.32□□□□□ -1.24
CKAP2-201ENST00000258607 CLDN34H7C241 214 aa7.32□□□□□ -1.24
CKAP2-201ENST00000258607 RBFOX2O43251 390 aaKnown RBP eCLIP7.32□□□□□ -1.24
CKAP2-201ENST00000258607 TRGC1P0CF51 173 aa7.32□□□□□ -1.24
CKAP2-201ENST00000258607 GCHFRP30047 84 aa7.32□□□□□ -1.24
CKAP2-201ENST00000258607 ATP5J2P56134 94 aa7.32□□□□□ -1.24
CKAP2-201ENST00000258607 LINC00305Q7Z4B0 112 aa7.32□□□□□ -1.24
CKAP2-201ENST00000258607 DYNAPQ8N1N2 210 aa7.32□□□□□ -1.24
CKAP2-201ENST00000258607 OCC1Q8TAD7 63 aa7.32□□□□□ -1.24
CKAP2-201ENST00000258607 SRSF12Q8WXF0 261 aaKnown RBP7.32□□□□□ -1.24
CKAP2-201ENST00000258607 MARVELD3Q96A59 401 aa7.32□□□□□ -1.24
CKAP2-201ENST00000258607 TRBV20OR9-2A0A075B6H5 130 aa7.31□□□□□ -1.24
CKAP2-201ENST00000258607 A0A1B0GW64 132 aa7.31□□□□□ -1.24
CKAP2-201ENST00000258607 OR2T8A6NH00 312 aa7.31□□□□□ -1.24
CKAP2-201ENST00000258607 G3V318 75 aa7.31□□□□□ -1.24
CKAP2-201ENST00000258607 SLC25A5P05141 298 aaKnown RBP7.31□□□□□ -1.24
CKAP2-201ENST00000258607 GZMBP10144 247 aa7.31□□□□□ -1.24
CKAP2-201ENST00000258607 IER3P46695 156 aa7.31□□□□□ -1.24
CKAP2-201ENST00000258607 EXOC3-AS1Q8N2X6 119 aa7.31□□□□□ -1.24
CKAP2-201ENST00000258607 GATA4P43694 442 aa7.31□□□□□ -1.24
CKAP2-201ENST00000258607 PRRX1P54821 245 aa7.31□□□□□ -1.24
CKAP2-201ENST00000258607 RHOBP62745 196 aa7.31□□□□□ -1.24
CKAP2-201ENST00000258607 SRSF7Q16629 238 aaKnown RBP eCLIP7.31□□□□□ -1.24
CKAP2-201ENST00000258607 TIGITQ495A1 244 aa7.31□□□□□ -1.24
CKAP2-201ENST00000258607 VMO1Q7Z5L0 202 aa7.31□□□□□ -1.24
CKAP2-201ENST00000258607 PPP1R27Q86WC6 154 aa7.31□□□□□ -1.24
CKAP2-201ENST00000258607 OR8I2Q8N0Y5 310 aa7.31□□□□□ -1.24
CKAP2-201ENST00000258607 C11orf44Q8N8P7 122 aa7.31□□□□□ -1.24
CKAP2-201ENST00000258607 WNT10AQ9GZT5 417 aa7.31□□□□□ -1.24
CKAP2-201ENST00000258607 TUBA4BQ9H853 241 aa7.31□□□□□ -1.24
CKAP2-201ENST00000258607 CLEC5AQ9NY25 188 aa7.31□□□□□ -1.24
CKAP2-201ENST00000258607 TRAV40A0A0B4J280 105 aa7.31□□□□□ -1.24
CKAP2-201ENST00000258607 RNASE2P10153 161 aaKnown RBP7.31□□□□□ -1.24
CKAP2-201ENST00000258607 NTF3P20783 257 aa7.31□□□□□ -1.24
CKAP2-201ENST00000258607 FLI1Q01543 452 aaPredicted RBP7.31□□□□□ -1.24
CKAP2-201ENST00000258607 TMEM155Q4W5P6 130 aa7.31□□□□□ -1.24
CKAP2-201ENST00000258607 IGF2-ASQ6U949 168 aa7.31□□□□□ -1.24
CKAP2-201ENST00000258607 C17orf77Q96MU5 243 aa7.31□□□□□ -1.24
CKAP2-201ENST00000258607 LINC01548A6NM66 108 aa7.3□□□□□ -1.24
CKAP2-201ENST00000258607 M0R3E3 92 aa7.3□□□□□ -1.24
CKAP2-201ENST00000258607 AMY1AP04745 511 aa7.3□□□□□ -1.24
CKAP2-201ENST00000258607 LIPFP07098 398 aa7.3□□□□□ -1.24
CKAP2-201ENST00000258607 CGB3P0DN86 165 aa7.3□□□□□ -1.24
CKAP2-201ENST00000258607 CGB7P0DN87 165 aa7.3□□□□□ -1.24
CKAP2-201ENST00000258607 SRD5A1P18405 259 aa7.3□□□□□ -1.24
CKAP2-201ENST00000258607 DDB2Q92466 427 aa7.3□□□□□ -1.24
CKAP2-201ENST00000258607 PGPA6NDG6 321 aa7.3□□□□□ -1.24
CKAP2-201ENST00000258607 FAM90A26D6RGX4 464 aa7.3□□□□□ -1.24
CKAP2-201ENST00000258607 IL3RAP26951 378 aa7.3□□□□□ -1.24
CKAP2-201ENST00000258607 FCGR2BP31994 310 aaPredicted RBP7.3□□□□□ -1.24
CKAP2-201ENST00000258607 CENPWQ5EE01 88 aa7.3□□□□□ -1.24
CKAP2-201ENST00000258607 C10orf113Q5VZT2 155 aa7.3□□□□□ -1.24
CKAP2-201ENST00000258607 RBM14Q96PK6 669 aaKnown RBP7.3□□□□□ -1.24
CKAP2-201ENST00000258607 SSBP4Q9BWG4 385 aaPredicted RBP7.3□□□□□ -1.24
CKAP2-201ENST00000258607 SDF2L1Q9HCN8 221 aa7.3□□□□□ -1.24
CKAP2-201ENST00000258607 RAB9BQ9NP90 201 aa7.3□□□□□ -1.24
CKAP2-201ENST00000258607 TMEM14BQ9NUH8 114 aa7.3□□□□□ -1.24
CKAP2-201ENST00000258607 BUB1B-PAK6H3BSN5 160 aa7.29□□□□□ -1.24
CKAP2-201ENST00000258607 IL4P05112 153 aa7.29□□□□□ -1.24
CKAP2-201ENST00000258607 GNG4P50150 75 aa7.29□□□□□ -1.24
CKAP2-201ENST00000258607 UCNP55089 124 aa7.29□□□□□ -1.24
CKAP2-201ENST00000258607 RPL15P61313 204 aaKnown RBP7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms