RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 K7EN84 100 aa3.89□□□□□ -1.79
USP44-201ENST00000258499 SIAH2O43255 324 aa3.89□□□□□ -1.79
USP44-201ENST00000258499 HTR1DP28221 377 aa3.89□□□□□ -1.79
USP44-201ENST00000258499 GFRALQ6UXV0 394 aa3.89□□□□□ -1.79
USP44-201ENST00000258499 TCF24Q7RTU0 167 aa3.89□□□□□ -1.79
USP44-201ENST00000258499 BEND2Q8NDZ0 799 aa3.89□□□□□ -1.79
USP44-201ENST00000258499 OR52E5Q8NH55 327 aa3.89□□□□□ -1.79
USP44-201ENST00000258499 RPEQ96AT9 228 aa3.89□□□□□ -1.79
USP44-201ENST00000258499 AP1S3Q96PC3 154 aa3.89□□□□□ -1.79
USP44-201ENST00000258499 RNF2Q99496 336 aa3.89□□□□□ -1.79
USP44-201ENST00000258499 MIEN1Q9BRT3 115 aa3.89□□□□□ -1.79
USP44-201ENST00000258499 SFXN3Q9BWM7 321 aa3.89□□□□□ -1.79
USP44-201ENST00000258499 COL6A3P12111 3177 aa3.89□□□□□ -1.79
USP44-201ENST00000258499 CEP192Q8TEP8 1941 aa3.89□□□□□ -1.79
USP44-201ENST00000258499 SPG11Q96JI7 2443 aa3.88□□□□□ -1.79
USP44-201ENST00000258499 HIGD1CA8MV81 97 aa3.88□□□□□ -1.79
USP44-201ENST00000258499 C16orf97H3BN30 126 aa3.88□□□□□ -1.79
USP44-201ENST00000258499 IGHV1-46P01743 117 aa3.88□□□□□ -1.79
USP44-201ENST00000258499 DLX1P56177 255 aa3.88□□□□□ -1.79
USP44-201ENST00000258499 PRCDQ00LT1 54 aa3.88□□□□□ -1.79
USP44-201ENST00000258499 TMEM177Q53S58 311 aa3.88□□□□□ -1.79
USP44-201ENST00000258499 PRNTQ86SH4 94 aa3.88□□□□□ -1.79
USP44-201ENST00000258499 OR4C13Q8NGP0 309 aa3.88□□□□□ -1.79
USP44-201ENST00000258499 FAM222BQ8WU58 562 aa3.88□□□□□ -1.79
USP44-201ENST00000258499 OR8B2Q96RD0 313 aa3.88□□□□□ -1.79
USP44-201ENST00000258499 CHRDL1Q9BU40 450 aa3.88□□□□□ -1.79
USP44-201ENST00000258499 INSIG2Q9Y5U4 225 aa3.88□□□□□ -1.79
USP44-201ENST00000258499 SLC25A15Q9Y619 301 aa3.88□□□□□ -1.79
USP44-201ENST00000258499 S4R3C0 116 aa3.88□□□□□ -1.79
USP44-201ENST00000258499 TLN1Q9Y490 2541 aaKnown RBP3.88□□□□□ -1.79
USP44-201ENST00000258499 PEX7O00628 323 aa3.88□□□□□ -1.79
USP44-201ENST00000258499 CRYABP02511 175 aaKnown RBP3.88□□□□□ -1.79
USP44-201ENST00000258499 CD40P25942 277 aa3.88□□□□□ -1.79
USP44-201ENST00000258499 LGALS4P56470 323 aa3.88□□□□□ -1.79
USP44-201ENST00000258499 RPL15P61313 204 aaKnown RBP3.88□□□□□ -1.79
USP44-201ENST00000258499 CD69Q07108 199 aa3.88□□□□□ -1.79
USP44-201ENST00000258499 PMCHL1Q16048 86 aa3.88□□□□□ -1.79
USP44-201ENST00000258499 COX19Q49B96 90 aa3.88□□□□□ -1.79
USP44-201ENST00000258499 COA6Q5JTJ3 125 aaKnown RBP3.88□□□□□ -1.79
USP44-201ENST00000258499 C1orf185Q5T7R7 199 aa3.88□□□□□ -1.79
USP44-201ENST00000258499 MBNL2Q5VZF2 373 aaKnown RBP3.88□□□□□ -1.79
USP44-201ENST00000258499 ZNF474Q6S9Z5 364 aaPredicted RBP3.88□□□□□ -1.79
USP44-201ENST00000258499 KIR3DL3Q8N743 410 aa3.88□□□□□ -1.79
USP44-201ENST00000258499 PERPQ96FX8 193 aa3.88□□□□□ -1.79
USP44-201ENST00000258499 PLSCR4Q9NRQ2 329 aa3.88□□□□□ -1.79
USP44-201ENST00000258499 BET1LQ9NYM9 111 aa3.88□□□□□ -1.79
USP44-201ENST00000258499 UQCR10Q9UDW1 63 aa3.88□□□□□ -1.79
USP44-201ENST00000258499 FOXA2Q9Y261 457 aaPredicted RBP3.88□□□□□ -1.79
USP44-201ENST00000258499 TRGV8A0A0C4DH27 118 aa3.88□□□□□ -1.79
USP44-201ENST00000258499 SRRM4A7MD48 611 aaKnown RBP3.88□□□□□ -1.79
USP44-201ENST00000258499 GGTLC3B5MD39 225 aa3.88□□□□□ -1.79
USP44-201ENST00000258499 M0QZ24 198 aa3.88□□□□□ -1.79
USP44-201ENST00000258499 HYPMO75409 117 aa3.88□□□□□ -1.79
USP44-201ENST00000258499 ZNF324O75467 553 aaPredicted RBP3.88□□□□□ -1.79
USP44-201ENST00000258499 TNFSF13O75888 250 aa3.88□□□□□ -1.79
USP44-201ENST00000258499 CT45A10P0DMU9 189 aa3.88□□□□□ -1.79
USP44-201ENST00000258499 AREGP15514 252 aa3.88□□□□□ -1.79
USP44-201ENST00000258499 RPL27AP46776 148 aaKnown RBP3.88□□□□□ -1.79
USP44-201ENST00000258499 LOXL3P58215 753 aa3.88□□□□□ -1.79
USP44-201ENST00000258499 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.88□□□□□ -1.79
USP44-201ENST00000258499 SSX8Q7RTT4 187 aa3.88□□□□□ -1.79
USP44-201ENST00000258499 EXPH5Q8NEV8 1989 aa3.88□□□□□ -1.79
USP44-201ENST00000258499 KCNS1Q96KK3 526 aa3.88□□□□□ -1.79
USP44-201ENST00000258499 NEU1Q99519 415 aa3.88□□□□□ -1.79
USP44-201ENST00000258499 CEP295Q9C0D2 2601 aa3.88□□□□□ -1.79
USP44-201ENST00000258499 GSX1Q9H4S2 264 aaPredicted RBP3.88□□□□□ -1.79
USP44-201ENST00000258499 NGBQ9NPG2 151 aa3.88□□□□□ -1.79
USP44-201ENST00000258499 ONECUT1Q9UBC0 465 aa3.88□□□□□ -1.79
USP44-201ENST00000258499 RPUSD1Q9UJJ7 312 aaKnown RBP3.88□□□□□ -1.79
USP44-201ENST00000258499 FBXL7Q9UJT9 491 aa3.88□□□□□ -1.79
USP44-201ENST00000258499 TRBV9A0A0B4J1U6 114 aa3.87□□□□□ -1.79
USP44-201ENST00000258499 ISLRO14498 428 aa3.87□□□□□ -1.79
USP44-201ENST00000258499 TDGF1P13385 188 aa3.87□□□□□ -1.79
USP44-201ENST00000258499 WT1P19544 449 aaPredicted RBP3.87□□□□□ -1.79
USP44-201ENST00000258499 TBR1Q16650 682 aa3.87□□□□□ -1.79
USP44-201ENST00000258499 MSMPQ1L6U9 139 aa3.87□□□□□ -1.79
USP44-201ENST00000258499 C17orf58Q2M2W7 97 aa3.87□□□□□ -1.79
USP44-201ENST00000258499 VWC2Q2TAL6 325 aa3.87□□□□□ -1.79
USP44-201ENST00000258499 DNLZQ5SXM8 178 aa3.87□□□□□ -1.79
USP44-201ENST00000258499 C1orf174Q8IYL3 243 aa3.87□□□□□ -1.79
USP44-201ENST00000258499 PMCHL2Q9BQD1 86 aa3.87□□□□□ -1.79
USP44-201ENST00000258499 SLC25A33Q9BSK2 321 aa3.87□□□□□ -1.79
USP44-201ENST00000258499 SPRY4Q9C004 299 aa3.87□□□□□ -1.79
USP44-201ENST00000258499 OSTCQ9NRP0 149 aa3.87□□□□□ -1.79
USP44-201ENST00000258499 CLEC5AQ9NY25 188 aa3.87□□□□□ -1.79
USP44-201ENST00000258499 CDC42EP3Q9UKI2 254 aa3.87□□□□□ -1.79
USP44-201ENST00000258499 WASHC3Q9Y3C0 194 aa3.87□□□□□ -1.79
USP44-201ENST00000258499 ATG2AQ2TAZ0 1938 aa3.87□□□□□ -1.79
USP44-201ENST00000258499 DSPP15924 2871 aaKnown RBP3.87□□□□□ -1.79
USP44-201ENST00000258499 NAV3Q8IVL0 2385 aa3.87□□□□□ -1.79
USP44-201ENST00000258499 MUC21A0A0G2JKD1 596 aa3.87□□□□□ -1.79
USP44-201ENST00000258499 MUC21A0A140T8X8 626 aa3.87□□□□□ -1.79
USP44-201ENST00000258499 FAM90A9PA6NNJ1 464 aa3.87□□□□□ -1.79
USP44-201ENST00000258499 A8MWL6 223 aa3.87□□□□□ -1.79
USP44-201ENST00000258499 C9JCJ5 164 aa3.87□□□□□ -1.79
USP44-201ENST00000258499 F2RL2O00254 374 aa3.87□□□□□ -1.79
USP44-201ENST00000258499 IGHG3P01860 377 aa3.87□□□□□ -1.79
USP44-201ENST00000258499 GPX1P07203 203 aa3.87□□□□□ -1.79
USP44-201ENST00000258499 NBEAP1P0C6P0 100 aa3.87□□□□□ -1.79
USP44-201ENST00000258499 P0C879 139 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms