RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 CR1P17927 2039 aa15.05■□□□□ -0
TRIM47-201ENST00000254816 NDUFA3O95167 84 aa15.05■□□□□ -0
TRIM47-201ENST00000254816 GCSAMLQ5JQS6 135 aa15.05■□□□□ -0
TRIM47-201ENST00000254816 SRSF12Q8WXF0 261 aaKnown RBP15.05■□□□□ -0
TRIM47-201ENST00000254816 RAB24Q969Q5 203 aa15.05■□□□□ -0
TRIM47-201ENST00000254816 MGST2Q99735 147 aa15.05■□□□□ -0
TRIM47-201ENST00000254816 C7orf69Q9H7B7 122 aa15.05■□□□□ -0
TRIM47-201ENST00000254816 NPVFQ9HCQ7 196 aa15.05■□□□□ -0
TRIM47-201ENST00000254816 HIF1ANQ9NWT6 349 aa15.05■□□□□ -0
TRIM47-201ENST00000254816 NCBP2LA6PVI3 153 aaKnown RBP15.04■□□□□ -0
TRIM47-201ENST00000254816 B4DSR2 109 aa15.04■□□□□ -0
TRIM47-201ENST00000254816 UBE2CO00762 179 aa15.04■□□□□ -0
TRIM47-201ENST00000254816 IGHV4-38-2P0DP08 117 aa15.04■□□□□ -0
TRIM47-201ENST00000254816 TMEM11P17152 192 aa15.04■□□□□ -0
TRIM47-201ENST00000254816 MEF2BQ02080 365 aaPredicted RBP15.04■□□□□ -0
TRIM47-201ENST00000254816 TEX22C9J3V5 150 aa15.04■□□□□ -0
TRIM47-201ENST00000254816 MBP02144 154 aa15.04■□□□□ -0
TRIM47-201ENST00000254816 Q8N6K4 173 aa15.04■□□□□ -0
TRIM47-201ENST00000254816 ACTR3CQ9C0K3 210 aaPredicted RBP15.04■□□□□ -0
TRIM47-201ENST00000254816 SDF2L1Q9HCN8 221 aa15.04■□□□□ -0
TRIM47-201ENST00000254816 BEX4Q9NWD9 120 aaPredicted RBP15.04■□□□□ -0
TRIM47-201ENST00000254816 IGHV1-69DA0A0B4J2H0 117 aa15.03■□□□□ -0
TRIM47-201ENST00000254816 RNF223E7ERA6 249 aa15.03■□□□□ -0
TRIM47-201ENST00000254816 CNIH1O95406 144 aa15.03■□□□□ -0
TRIM47-201ENST00000254816 IGHV1-69P01742 117 aa15.03■□□□□ -0
TRIM47-201ENST00000254816 MEOX2P50222 304 aa15.03■□□□□ -0
TRIM47-201ENST00000254816 RPUSD4Q96CM3 377 aaKnown RBP15.03■□□□□ -0
TRIM47-201ENST00000254816 SSX3Q99909 188 aa15.03■□□□□ -0
TRIM47-201ENST00000254816 SOX21Q9Y651 276 aaPredicted RBP15.03■□□□□ -0
TRIM47-201ENST00000254816 HELZ2Q9BYK8 2649 aaKnown RBP15.03■□□□□ -0
TRIM47-201ENST00000254816 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.03■□□□□ -07e-10■■■■□ 25.6
TRIM47-201ENST00000254816 C17orf112F2Z3M2 114 aa15.03■□□□□ -0
TRIM47-201ENST00000254816 IGHV3-48P01763 117 aa15.03■□□□□ -0
TRIM47-201ENST00000254816 EBI3Q14213 229 aa15.03■□□□□ -0
TRIM47-201ENST00000254816 C5orf64Q2M2E5 130 aa15.03■□□□□ -0
TRIM47-201ENST00000254816 SSMEM1Q8WWF3 244 aa15.03■□□□□ -0
TRIM47-201ENST00000254816 SMIM7Q9BQ49 75 aa15.03■□□□□ -0
TRIM47-201ENST00000254816 FAM103A1Q9BTL3 118 aaKnown RBP15.03■□□□□ -0
TRIM47-201ENST00000254816 AVPP01185 164 aa15.02□□□□□ -0.01
TRIM47-201ENST00000254816 PSMB3P49720 205 aa15.02□□□□□ -0.01
TRIM47-201ENST00000254816 MFAP2P55001 183 aa15.02□□□□□ -0.01
TRIM47-201ENST00000254816 ATP5IP56385 69 aaPredicted RBP15.02□□□□□ -0.01
TRIM47-201ENST00000254816 CD69Q07108 199 aa15.02□□□□□ -0.01
TRIM47-201ENST00000254816 GAMTQ14353 236 aa15.02□□□□□ -0.01
TRIM47-201ENST00000254816 Q5PR19 223 aa15.02□□□□□ -0.01
TRIM47-201ENST00000254816 OR2T6Q8NHC8 308 aa15.02□□□□□ -0.01
TRIM47-201ENST00000254816 GGTLC1Q9BX51 225 aa15.02□□□□□ -0.01
TRIM47-201ENST00000254816 LSM4Q9Y4Z0 139 aaKnown RBP15.02□□□□□ -0.01
TRIM47-201ENST00000254816 B4DEV8 164 aa15.01□□□□□ -0.01
TRIM47-201ENST00000254816 CYB5BO43169 146 aa15.01□□□□□ -0.01
TRIM47-201ENST00000254816 PNRC1Q12796 327 aaPredicted RBP15.01□□□□□ -0.01
TRIM47-201ENST00000254816 MIC13Q5XKP0 118 aa15.01□□□□□ -0.01
TRIM47-201ENST00000254816 TEPPQ6URK8 271 aa15.01□□□□□ -0.01
TRIM47-201ENST00000254816 OR4F5Q8NH21 305 aa15.01□□□□□ -0.01
TRIM47-201ENST00000254816 OR4F4Q96R69 305 aa15.01□□□□□ -0.01
TRIM47-201ENST00000254816 FNDC4Q9H6D8 234 aaPredicted RBP15.01□□□□□ -0.01
TRIM47-201ENST00000254816 ABCA1O95477 2261 aa15.01□□□□□ -0.01
TRIM47-201ENST00000254816 CXorf65A6NEN9 183 aa15.01□□□□□ -0.01
TRIM47-201ENST00000254816 SUB1P53999 127 aaKnown RBP eCLIP15.01□□□□□ -0.01
TRIM47-201ENST00000254816 ADIRFQ15847 76 aa15.01□□□□□ -0.01
TRIM47-201ENST00000254816 C1QL4Q86Z23 238 aa15.01□□□□□ -0.01
TRIM47-201ENST00000254816 PAGE4O60829 102 aa15□□□□□ -0.01
TRIM47-201ENST00000254816 FAM106CPP0CH98 169 aa15□□□□□ -0.01
TRIM47-201ENST00000254816 BRS3P32247 399 aa15□□□□□ -0.01
TRIM47-201ENST00000254816 OPRK1P41145 380 aa15□□□□□ -0.01
TRIM47-201ENST00000254816 CDC34P49427 236 aaPredicted RBP15□□□□□ -0.01
TRIM47-201ENST00000254816 KIAA0141Q14154 515 aaPredicted RBP15□□□□□ -0.01
TRIM47-201ENST00000254816 FXYD3Q14802 87 aa15□□□□□ -0.01
TRIM47-201ENST00000254816 ACOT6Q3I5F7 207 aaPredicted RBP15□□□□□ -0.01
TRIM47-201ENST00000254816 ABHD5Q8WTS1 349 aa15□□□□□ -0.01
TRIM47-201ENST00000254816 IGKV1OR2-108A0A075B7D4 117 aa15□□□□□ -0.01
TRIM47-201ENST00000254816 A0A0U1RQK1 487 aa15□□□□□ -0.01
TRIM47-201ENST00000254816 AP4M1O00189 453 aa15□□□□□ -0.01
TRIM47-201ENST00000254816 MPDU1O75352 247 aa15□□□□□ -0.01
TRIM47-201ENST00000254816 PMS2P11Q13670 270 aa15□□□□□ -0.01
TRIM47-201ENST00000254816 SLC16A13Q7RTY0 426 aa15□□□□□ -0.01
TRIM47-201ENST00000254816 MISP3Q96FF7 219 aa15□□□□□ -0.01
TRIM47-201ENST00000254816 LINC01356Q8N9X3 169 aa14.99□□□□□ -0.01
TRIM47-201ENST00000254816 ACY3Q96HD9 319 aa14.99□□□□□ -0.01
TRIM47-201ENST00000254816 PXMP4Q9Y6I8 212 aa14.99□□□□□ -0.01
TRIM47-201ENST00000254816 IGHV3-21A0A0B4J1V1 117 aa14.99□□□□□ -0.01
TRIM47-201ENST00000254816 LRRC75A-AS1Q8N1F1 130 aa14.99□□□□□ -0.01
TRIM47-201ENST00000254816 PARLQ9H300 379 aa14.99□□□□□ -0.01
TRIM47-201ENST00000254816 MANBALQ9NQG1 85 aa14.99□□□□□ -0.01
TRIM47-201ENST00000254816 NAV2Q8IVL1 2488 aa14.98□□□□□ -0.01
TRIM47-201ENST00000254816 TRAV20A0A0B4J274 112 aa14.98□□□□□ -0.01
TRIM47-201ENST00000254816 YIF1AO95070 293 aa14.98□□□□□ -0.01
TRIM47-201ENST00000254816 TMEM144Q7Z5S9 345 aa14.98□□□□□ -0.01
TRIM47-201ENST00000254816 MRPL41Q8IXM3 137 aaKnown RBP14.98□□□□□ -0.01
TRIM47-201ENST00000254816 RNASEH2CQ8TDP1 164 aaKnown RBP14.98□□□□□ -0.01
TRIM47-201ENST00000254816 MRPL36Q9P0J6 103 aaKnown RBP14.98□□□□□ -0.01
TRIM47-201ENST00000254816 NAT8Q9UHE5 227 aa14.98□□□□□ -0.01
TRIM47-201ENST00000254816 DMRT1Q9Y5R6 373 aa14.98□□□□□ -0.01
TRIM47-201ENST00000254816 FNDC10F2Z333 226 aa14.97□□□□□ -0.01
TRIM47-201ENST00000254816 CLDN34H7C241 214 aa14.97□□□□□ -0.01
TRIM47-201ENST00000254816 UBE2G2P60604 165 aa14.97□□□□□ -0.01
TRIM47-201ENST00000254816 CX3CL1P78423 397 aa14.97□□□□□ -0.01
TRIM47-201ENST00000254816 NDPQ00604 133 aa14.97□□□□□ -0.01
TRIM47-201ENST00000254816 KLF17Q5JT82 389 aaPredicted RBP14.97□□□□□ -0.01
TRIM47-201ENST00000254816 Q8N9W7 124 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms