RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 IZUMO4Q1ZYL8 232 aa7.52□□□□□ -1.21
VPS50-201ENST00000251739 TCF24Q7RTU0 167 aa7.52□□□□□ -1.21
VPS50-201ENST00000251739 H2BFWTQ7Z2G1 175 aa7.52□□□□□ -1.21
VPS50-201ENST00000251739 LHFPL1Q86WI0 220 aa7.52□□□□□ -1.21
VPS50-201ENST00000251739 FAM24BQ8N5W8 94 aa7.52□□□□□ -1.21
VPS50-201ENST00000251739 OR11H2Q8NH07 326 aa7.52□□□□□ -1.21
VPS50-201ENST00000251739 OR4A16Q8NH70 328 aa7.52□□□□□ -1.21
VPS50-201ENST00000251739 CMTM3Q96MX0 182 aa7.52□□□□□ -1.21
VPS50-201ENST00000251739 GINS3Q9BRX5 216 aa7.52□□□□□ -1.21
VPS50-201ENST00000251739 MFFQ9GZY8 342 aa7.52□□□□□ -1.21
VPS50-201ENST00000251739 MS4A6AQ9H2W1 248 aa7.52□□□□□ -1.21
VPS50-201ENST00000251739 IGKV3-7A0A075B6H7 116 aa7.51□□□□□ -1.21
VPS50-201ENST00000251739 A0A0B4J293 547 aa7.51□□□□□ -1.21
VPS50-201ENST00000251739 S100GP29377 79 aa7.51□□□□□ -1.21
VPS50-201ENST00000251739 NPBWR1P48145 328 aa7.51□□□□□ -1.21
VPS50-201ENST00000251739 TSPAN5P62079 268 aa7.51□□□□□ -1.21
VPS50-201ENST00000251739 LSM3P62310 102 aaKnown RBP7.51□□□□□ -1.21
VPS50-201ENST00000251739 BSXQ3C1V8 233 aa7.51□□□□□ -1.21
VPS50-201ENST00000251739 ZNF600Q6ZNG1 722 aa7.51□□□□□ -1.21
VPS50-201ENST00000251739 GBGT1Q8N5D6 347 aa7.51□□□□□ -1.21
VPS50-201ENST00000251739 Q8NAQ8 132 aa7.51□□□□□ -1.21
VPS50-201ENST00000251739 C11orf45Q8TAV5 145 aa7.51□□□□□ -1.21
VPS50-201ENST00000251739 ZNF486Q96H40 463 aaPredicted RBP7.51□□□□□ -1.21
VPS50-201ENST00000251739 KRTAP4-8Q9BYQ9 185 aa7.51□□□□□ -1.21
VPS50-201ENST00000251739 MRPL36Q9P0J6 103 aaKnown RBP7.51□□□□□ -1.21
VPS50-201ENST00000251739 PUS1Q9Y606 427 aaKnown RBP eCLIP7.51□□□□□ -1.21
VPS50-201ENST00000251739 TMEM50AO95807 157 aa7.5□□□□□ -1.21
VPS50-201ENST00000251739 CA1P00915 261 aaPredicted RBP7.5□□□□□ -1.21
VPS50-201ENST00000251739 RNASE2P10153 161 aaKnown RBP7.5□□□□□ -1.21
VPS50-201ENST00000251739 ELK1P19419 428 aa7.5□□□□□ -1.21
VPS50-201ENST00000251739 TCTAP57738 103 aa7.5□□□□□ -1.21
VPS50-201ENST00000251739 NCS1P62166 190 aa7.5□□□□□ -1.21
VPS50-201ENST00000251739 PAFAH1B2P68402 229 aa7.5□□□□□ -1.21
VPS50-201ENST00000251739 ERHP84090 104 aaKnown RBP7.5□□□□□ -1.21
VPS50-201ENST00000251739 RBMS2Q15434 407 aaKnown RBP7.5□□□□□ -1.21
VPS50-201ENST00000251739 AARDQ4LEZ3 155 aa7.5□□□□□ -1.21
VPS50-201ENST00000251739 SPINK9Q5DT21 86 aa7.5□□□□□ -1.21
VPS50-201ENST00000251739 TRPT1Q86TN4 253 aaKnown RBP7.5□□□□□ -1.21
VPS50-201ENST00000251739 SNX29P2Q8IUI4 249 aa7.5□□□□□ -1.21
VPS50-201ENST00000251739 PINX1Q96BK5 328 aaKnown RBP7.5□□□□□ -1.21
VPS50-201ENST00000251739 TP53RKQ96S44 253 aa7.5□□□□□ -1.21
VPS50-201ENST00000251739 HRH4Q9H3N8 390 aa7.5□□□□□ -1.21
VPS50-201ENST00000251739 FNDC4Q9H6D8 234 aaPredicted RBP7.5□□□□□ -1.21
VPS50-201ENST00000251739 A0A087WXM4 84 aa7.49□□□□□ -1.21
VPS50-201ENST00000251739 K7EQG2 157 aa7.49□□□□□ -1.21
VPS50-201ENST00000251739 M0QYG6 137 aa7.49□□□□□ -1.21
VPS50-201ENST00000251739 ST8SIA3O43173 380 aa7.49□□□□□ -1.21
VPS50-201ENST00000251739 IGKV1-17P01599 117 aa7.49□□□□□ -1.21
VPS50-201ENST00000251739 CRYBB3P26998 211 aa7.49□□□□□ -1.21
VPS50-201ENST00000251739 DEFB131AP59861 70 aa7.49□□□□□ -1.21
VPS50-201ENST00000251739 TMEM187Q14656 261 aa7.49□□□□□ -1.21
VPS50-201ENST00000251739 LEMD1Q68G75 181 aa7.49□□□□□ -1.21
VPS50-201ENST00000251739 ARRDC1Q8N5I2 433 aa7.49□□□□□ -1.21
VPS50-201ENST00000251739 DUSP18Q8NEJ0 188 aa7.49□□□□□ -1.21
VPS50-201ENST00000251739 GRAMD2BQ96HH9 432 aa7.49□□□□□ -1.21
VPS50-201ENST00000251739 COMMD3Q9UBI1 195 aa7.49□□□□□ -1.21
VPS50-201ENST00000251739 IGHV3-66A0A0C4DH42 116 aa7.48□□□□□ -1.21
VPS50-201ENST00000251739 A0A0G2JRQ6 117 aa7.48□□□□□ -1.21
VPS50-201ENST00000251739 ZNF705EA8MWA4 302 aaPredicted RBP7.48□□□□□ -1.21
VPS50-201ENST00000251739 FAM25EA8MYX2 175 aa7.48□□□□□ -1.21
VPS50-201ENST00000251739 CORTO00230 105 aa7.48□□□□□ -1.21
VPS50-201ENST00000251739 DEFB4AO15263 64 aa7.48□□□□□ -1.21
VPS50-201ENST00000251739 HPGDSO60760 199 aa7.48□□□□□ -1.21
VPS50-201ENST00000251739 CLN5O75503 358 aa7.48□□□□□ -1.21
VPS50-201ENST00000251739 RBMY1A1P0DJD3 496 aaKnown RBP7.48□□□□□ -1.21
VPS50-201ENST00000251739 RBMY1CP0DJD4 496 aa7.48□□□□□ -1.21
VPS50-201ENST00000251739 PI3P19957 117 aa7.48□□□□□ -1.21
VPS50-201ENST00000251739 TBPP20226 339 aa7.48□□□□□ -1.21
VPS50-201ENST00000251739 C4BPBP20851 252 aa7.48□□□□□ -1.21
VPS50-201ENST00000251739 UCP1P25874 307 aa7.48□□□□□ -1.21
VPS50-201ENST00000251739 SNCAP37840 140 aa7.48□□□□□ -1.21
VPS50-201ENST00000251739 RPL5P46777 297 aaKnown RBP7.48□□□□□ -1.21
VPS50-201ENST00000251739 PIGPP57054 158 aa7.48□□□□□ -1.21
VPS50-201ENST00000251739 RBMY1FQ15415 496 aaKnown RBP7.48□□□□□ -1.21
VPS50-201ENST00000251739 SLC35G3Q8N808 338 aa7.48□□□□□ -1.21
VPS50-201ENST00000251739 OR4X1Q8NH49 305 aa7.48□□□□□ -1.21
VPS50-201ENST00000251739 DCANP1Q8TF63 244 aa7.48□□□□□ -1.21
VPS50-201ENST00000251739 FUNDC2Q9BWH2 189 aa7.48□□□□□ -1.21
VPS50-201ENST00000251739 TMEM231Q9H6L2 316 aa7.48□□□□□ -1.21
VPS50-201ENST00000251739 FBXL17Q9UF56 701 aa7.48□□□□□ -1.21
VPS50-201ENST00000251739 PFDN2Q9UHV9 154 aa7.48□□□□□ -1.21
VPS50-201ENST00000251739 APLNQ9ULZ1 77 aa7.48□□□□□ -1.21
VPS50-201ENST00000251739 RYR1P21817 5038 aa7.48□□□□□ -1.21
VPS50-201ENST00000251739 DNAH11Q96DT5 4516 aa7.48□□□□□ -1.21
VPS50-201ENST00000251739 PKD1P98161 4303 aa7.47□□□□□ -1.21
VPS50-201ENST00000251739 IGHV4-28A0A0C4DH34 117 aa7.47□□□□□ -1.21
VPS50-201ENST00000251739 SMIM31A0A1B0GVY4 71 aa7.47□□□□□ -1.21
VPS50-201ENST00000251739 TNFAIP8O95379 198 aa7.47□□□□□ -1.21
VPS50-201ENST00000251739 CD3DP04234 171 aa7.47□□□□□ -1.21
VPS50-201ENST00000251739 IFNA4P05014 189 aa7.47□□□□□ -1.21
VPS50-201ENST00000251739 P2RY1P47900 373 aa7.47□□□□□ -1.21
VPS50-201ENST00000251739 AKR1C2P52895 323 aa7.47□□□□□ -1.21
VPS50-201ENST00000251739 PPP5CP53041 499 aa7.47□□□□□ -1.21
VPS50-201ENST00000251739 VBP1P61758 197 aa7.47□□□□□ -1.21
VPS50-201ENST00000251739 TMEM41BQ5BJD5 291 aa7.47□□□□□ -1.21
VPS50-201ENST00000251739 RNASE10Q5GAN6 216 aaKnown RBP7.47□□□□□ -1.21
VPS50-201ENST00000251739 Q6ZRM9 215 aa7.47□□□□□ -1.21
VPS50-201ENST00000251739 OR52I2Q8NH67 350 aa7.47□□□□□ -1.21
VPS50-201ENST00000251739 C2CD4CQ8TF44 421 aa7.47□□□□□ -1.21
VPS50-201ENST00000251739 RABL2AQ9UBK7 228 aaPredicted RBP7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms